TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000032_1.0 # Protein # Selenophosphate synthetase 1 (SPS1)
# Homo sapiens # Complete
         (392 letters)

Database: A.taiwanensis/genome.fa 
           5379 sequences; 6,149,411 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJQ01005355.1| Ascogregarina taiwanensis CLECOP4A-H04.b1.032...    35   0.020
gb|ABJQ01000115.1| Ascogregarina taiwanensis Contig128, whole ge...    26   9.1  

>gb|ABJQ01005355.1| Ascogregarina taiwanensis CLECOP4A-H04.b1.032.ab1, whole genome
           shotgun sequence
          Length = 799

 Score = 34.7 bits (78), Expect = 0.020
 Identities = 30/117 (25%), Positives = 43/117 (36%), Gaps = 26/117 (22%)
 Frame = +3

Query: 238 QEAMMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLA 297
           +EA+  M RLN             + TD+TGFG LGH   +    R         +P LA
Sbjct: 45  KEAIEIMTRLNNAGTEFATVPGVKSMTDVTGFGFLGHLIEMCDGSRVTARVNFKTIPQLA 224

Query: 298 ------KMAAVSKACGNMFG----LMHGTC----------------PETSGGLLICL 328
                 ++  +  A    F      + G C                P+TSGGLL+ +
Sbjct: 225 CVEKYIRLGCIPGATRRNFDSYGHRVMGLCINDSPTSSIERTILCDPQTSGGLLVAV 395


>gb|ABJQ01000115.1| Ascogregarina taiwanensis Contig128, whole genome shotgun sequence
          Length = 743

 Score = 25.8 bits (55), Expect = 9.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2

Query: 324 LLICLPREQAARFCAEIKSPKYGEGHQ 350
           L+ICL   + + FC+ +KSP   + ++
Sbjct: 578 LIICLTAVRGSSFCSGVKSPSTSQSNR 658


  Database: A.taiwanensis/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 6,149,411
  Number of sequences in database:  5379
  
Lambda     K      H
   0.320    0.135    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,755,937
Number of Sequences: 5379
Number of extensions: 38764
Number of successful extensions: 153
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of query: 392
length of database: 2,049,803
effective HSP length: 89
effective length of query: 303
effective length of database: 1,571,072
effective search space: 476034816
effective search space used: 476034816
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)