TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000047_1.0 # Protein # Selenophosphate synthetase 1 (SPS1)
# Drosophila melanogaster # Complete
         (398 letters)

Database: A.taiwanensis/genome.fa 
           5379 sequences; 6,149,411 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJQ01005355.1| Ascogregarina taiwanensis CLECOP4A-H04.b1.032...    31   0.29 
gb|ABJQ01002749.1| Ascogregarina taiwanensis Contig3067, whole g...    27   4.2  
gb|ABJQ01001560.1| Ascogregarina taiwanensis Contig1785, whole g...    27   5.4  

>gb|ABJQ01005355.1| Ascogregarina taiwanensis CLECOP4A-H04.b1.032.ab1, whole genome
           shotgun sequence
          Length = 799

 Score = 30.8 bits (68), Expect = 0.29
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +3

Query: 262 AMNSMARLNRVAARLMHKYNAHGATDITGFGLLGH 296
           A+  M RLN               TD+TGFG LGH
Sbjct: 51  AIEIMTRLNNAGTEFATVPGVKSMTDVTGFGFLGH 155


>gb|ABJQ01002749.1| Ascogregarina taiwanensis Contig3067, whole genome shotgun sequence
          Length = 1501

 Score = 26.9 bits (58), Expect = 4.2
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 319 AKMAAVAKACGNMFQLLQGHSAETSGGLLICLPREQAA 356
           AK A +AK CG  FQ  +  S     GL    P+EQA+
Sbjct: 108 AKSAKIAKFCGRCFQGSRIFSF*KLSGLSSLSPKEQAS 221


>gb|ABJQ01001560.1| Ascogregarina taiwanensis Contig1785, whole genome shotgun sequence
          Length = 1129

 Score = 26.6 bits (57), Expect = 5.4
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +1

Query: 51  CKVPQDVLSKLVSALQQDYSAQDQEPQFLNVAIPR 85
           C VPQ + +K  SAL +D SA  + P FLN+ I R
Sbjct: 796 CLVPQYLQNKK-SALHKDLSA*RKYPIFLNIYIYR 897


  Database: A.taiwanensis/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 6,149,411
  Number of sequences in database:  5379
  
Lambda     K      H
   0.321    0.136    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,777,840
Number of Sequences: 5379
Number of extensions: 39070
Number of successful extensions: 152
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of query: 398
length of database: 2,049,803
effective HSP length: 89
effective length of query: 309
effective length of database: 1,571,072
effective search space: 485461248
effective search space used: 485461248
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)