TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000056_1.0 # Protein # Selenophosphate synthetase 2 (SPS2)
# Anopheles gambiae # Complete
         (369 letters)

Database: A.taiwanensis/genome.fa 
           5379 sequences; 6,149,411 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJQ01005355.1| Ascogregarina taiwanensis CLECOP4A-H04.b1.032...    41   2e-04
gb|ABJQ01000536.1| Ascogregarina taiwanensis Contig648, whole ge...    26   8.5  

>gb|ABJQ01005355.1| Ascogregarina taiwanensis CLECOP4A-H04.b1.032.ab1, whole genome
           shotgun sequence
          Length = 799

 Score = 41.2 bits (95), Expect = 2e-04
 Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +3

Query: 236 ALESMSRLNKTGAELMKKYGAHAATDVTGFGLYGHAENL--ASHQTADVDF 284
           A+E M+RLN  G E     G  + TDVTGFG  GH   +   S  TA V+F
Sbjct: 51  AIEIMTRLNNAGTEFATVPGVKSMTDVTGFGFLGHLIEMCDGSRVTARVNF 203


>gb|ABJQ01000536.1| Ascogregarina taiwanensis Contig648, whole genome shotgun sequence
          Length = 1276

 Score = 25.8 bits (55), Expect = 8.5
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -1

Query: 160  ENPWCVIGGAASAVCHRSELIMPYNAQPGDALVL 193
            EN W    GA + VC   EL  P     GDA +L
Sbjct: 1072 EN*WSNERGARTDVCRAGELRTPARVYEGDAELL 971


  Database: A.taiwanensis/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 6,149,411
  Number of sequences in database:  5379
  
Lambda     K      H
   0.319    0.136    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,383,637
Number of Sequences: 5379
Number of extensions: 32300
Number of successful extensions: 126
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of query: 369
length of database: 2,049,803
effective HSP length: 88
effective length of query: 281
effective length of database: 1,576,451
effective search space: 442982731
effective search space used: 442982731
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)