TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000038_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Homo sapiens # Complete (596 letters) Database: T.trahens/genome.fa 131 sequences; 28,680,627 total letters Searching.................................................................done Score E Sequences producing significant alignments: (bits) Value gb|GL349496.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 366 e-101 gb|GL349438.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 100 4e-21 gb|GL349487.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 89 7e-18 gb|GL349448.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 78 2e-14 gb|GL349460.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 75 2e-13 gb|GL349467.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 65 1e-10 gb|GL349450.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 65 1e-10 gb|GL349434.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 61 3e-09 gb|GL349465.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 50 6e-06 gb|GL349483.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 49 1e-05 gb|GL349461.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 48 2e-05 gb|GL349495.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 48 2e-05 gb|GL349435.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 38 0.017 gb|GL349437.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 37 0.030 gb|GL349459.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 36 0.086 gb|GL349463.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 35 0.11 gb|GL349433.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 32 1.2 gb|GL349493.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 32 1.6 gb|GL349477.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 31 2.1 >gb|GL349496.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.64, whole genome shotgun sequence Length = 195173 Score = 366 bits (940), Expect = e-101 Identities = 213/517 (41%), Positives = 288/517 (55%), Gaps = 33/517 (6%) Frame = -2 Query: 13 LGHIDSGKXXXXXXXXXXXXXXXFDKQPQSRERGITLDLGFSCFSVPLPARLRS------ 66 LGH+DSGK FDK PQS+ RGITLDLGFS VPLP L Sbjct: 56005 LGHVDSGKTSLAKALSTLASTAAFDKHPQSQVRGITLDLGFSALRVPLPPALAGLRLDGH 55826 Query: 67 -------------------SXXXXXXXXXXXXXXXXXXXQVTLVDCPGHASLIRTIIGGA 107 Q TLVDCPGHASLI+TIIGGA Sbjct: 55825 DDGTPDICSGTTSGNDTGDHPGKEDESGLLTVGDKYDEIQFTLVDCPGHASLIKTIIGGA 55646 Query: 108 QIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKIDLLPEGKRQAAIDKMTKKM 167 IID+M+LV+D G QTQ+AECLVIG++ L+V LNKIDL PE KR + + KMTK++ Sbjct: 55645 SIIDIMVLVVDAKAGFQTQTAECLVIGELTADTLMVALNKIDLFPEEKRASKVAKMTKRV 55466 Query: 168 QKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIPELIELLTSQISIPTRDPS-GPFLM 226 TL+ T F + I+PV + +L++ LT+ + +PTR+ + FL Sbjct: 55465 AATLKPTAFANSDILPVSASSGDG----------LSDLVDALTAAVRLPTRNEAEDAFLF 55316 Query: 227 SVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRL 286 ++DHCF +KGQGTV+TGTI GS+++G ++E PAL + KKVKSMQMF P+ A+QGDRL Sbjct: 55315 AIDHCFQVKGQGTVVTGTIQRGSVAVGQTIEFPALGLSKKVKSMQMFKAPVERAVQGDRL 55136 Query: 287 GICVTQFDPKLLERGLVCAPESLHTVHAALISVEKIPYFRGPLQTKAKFHITVGHETVMG 346 GICV Q + KLLERGL CAP ++ V AA++ V +IPYFRG ++++AKFH+TVGHETVM Sbjct: 55135 GICVAQLNAKLLERGLACAPGTIRAVSAAVVRVSRIPYFRGEIKSRAKFHLTVGHETVMA 54956 Query: 347 RLMFFSPAPDNFDQEPILDSFNFSQEYLFQEQYLSKDLTPAVT-----DNDEADKKAGQA 401 L FF D + + + S + + D P D++ D + Sbjct: 54955 TLQFFRSVGPGEDPHGLASTASSSSAASSSDAASAADSAPHPAHVFSYDDEYLDVSELEG 54776 Query: 402 TEGH-CPRQQWALVEFEKPVTCPRLCLVIGSRLDADIHTNTCRLAFHGILLHGLEDRNYA 460 E + +A++E E PV C ++IGSRLD+D+ N CRLAF G L+ Sbjct: 54775 PEAYPTGSTTYAVLELESPVLCAPDAMIIGSRLDSDVDGNVCRLAFSGSLVAPF------ 54614 Query: 461 DSFLP-RLKVYKLKHKHGLVERAMDDYSVIGRSLFKK 496 DS P LK++++K K G + R ++ I + LF + Sbjct: 54613 DSDTPWALKIFRVKAKVGHITRLKNEREAICKGLFPR 54503 >gb|GL349438.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.6, whole genome shotgun sequence Length = 631277 Score = 100 bits (248), Expect = 4e-21 Identities = 65/222 (29%), Positives = 113/222 (50%), Gaps = 6/222 (2%) Frame = +3 Query: 91 VDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIG-QIACQKLVVVLNKID 149 VDCPGH ++ +I GA +D +LV+ T G Q+ E +++ Q+ Q LVV +NK+D Sbjct: 39069 VDCPGHQDFVKNMITGASTMDGAILVVSGTDGQMPQTREHVLLARQVGIQDLVVYVNKVD 39248 Query: 150 LLPEGKRQAAIDKMTKKMQKTLENTKFRG--APIIPVXXXXXXXXXXXXXXXXXIPELIE 207 + + + ++ + ++++ L + + G P + + +L++ Sbjct: 39249 QVDDPEM---LELVEMELRELLTSFGYDGDEVPFVFGSALMALEDKDPENGRDSVLKLLD 39419 Query: 208 LLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKV 267 ++ + IS P RD PFLM ++ SI G+GTV+TG + G ++ G+ VEI L K Sbjct: 39420 IVDASISEPKRDVDKPFLMPIEDVHSIAGRGTVVTGRVEQGVLAKGEDVEILGLGSKSKT 39599 Query: 268 --KSMQMFHMPITSAMQGDRLGICVTQFDPKLLERG-LVCAP 306 ++MFH + A GD LG + + RG ++CAP Sbjct: 39600 VCTGIEMFHKQLDEARAGDNLGALLRGVKRDEIRRGQVLCAP 39725 >gb|GL349487.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.55, whole genome shotgun sequence Length = 273410 Score = 89.4 bits (220), Expect = 7e-18 Identities = 75/311 (24%), Positives = 133/311 (42%), Gaps = 24/311 (7%) Frame = +3 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 D Q R RG+T+D F + + P R +TLVD PGH Sbjct: 153474 DSQAAERARGVTIDCAF--WKLETPERF-----------------------ITLVDGPGH 153578 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAE--------CLVIGQIACQKLVVVLNKI 148 S ++ + G DL +LV+D + G S V ++ +LVV +NK+ Sbjct: 153579 RSFLKNAVMGMAQADLALLVVDASPGAFEASISRGGMVRDHLTVAKSMSMTRLVVAINKM 153758 Query: 149 DLLPEGKRQAAIDKMTKKMQKTLENTKF--RGAPIIPVXXXXXXXXXXXXXXXXXI---- 202 D G +A ++ ++++ L + F R ++P+ Sbjct: 153759 DAA--GYDEARFVEVGSELERLLRKSGFSKRSVAMVPIAAFAGVNLCDEARDVMPWYYSG 153932 Query: 203 -----PELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVE 257 P L+ L + ++IP R PF M++ F + G GTV+ G +LSG I+ GD + Sbjct: 153933 KYGSGPTLVAALDA-VAIPVRAVEKPFRMAIAESFVVSGVGTVVGGRVLSGKIAPGDDLV 154109 Query: 258 IPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCA-----PESLHTV 312 + + + V+S++M H+ + + GD +G+ + + + RG V A P ++ + Sbjct: 154110 VAPIDMPTAVRSVEMHHVQLAQGVAGDIVGLHLKKVGVAQVPRGYVVAAASNPPRAVTSF 154289 Query: 313 HAALISVEKIP 323 A ++ V + P Sbjct: 154290 RARIVVVVRHP 154322 >gb|GL349448.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.16, whole genome shotgun sequence Length = 538444 Score = 78.2 bits (191), Expect = 2e-14 Identities = 69/281 (24%), Positives = 113/281 (40%), Gaps = 12/281 (4%) Frame = -1 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 DK RERGIT+D+ F VT++D PGH Sbjct: 163339 DKLKSERERGITIDISLWKFET-------------------------NNYYVTVIDAPGH 163235 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKG-------MQTQSAE-CLVIGQIACQKLVVVLNKI 148 I+ +I G D +LVID T+G Q+ E L+ + ++L+V +NK+ Sbjct: 163234 RDFIKNMITGTSQADCAVLVIDGTRGGFEAGISKDGQTREHALLAYTLGVKQLIVAVNKM 163055 Query: 149 DLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPI--IPVXXXXXXXXXXXXXXXXXI--PE 204 D Q +++ +++ ++ + + +P+ P Sbjct: 163054 DADSVQFSQQRFEEIVAEVKSAIKKVGYNPKKVTFVPISGWTGDNMLEPSSNMSWWTGPT 162875 Query: 205 LIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVV 264 L+E L S I PTR P + V + I G GTV G + +G I G +++ V Sbjct: 162874 LLEALDS-IKAPTRATERPLRIPVQDVYVIDGLGTVPVGRVEAGVIQPGMAIQFAPSGAV 162698 Query: 265 KKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCA 305 + KS++M H + + GD +G V +ERG V + Sbjct: 162697 AECKSVEMHHEQLEAGNAGDSIGFNVKSLGISDIERGFVAS 162575 Score = 45.4 bits (106), Expect = 1e-04 Identities = 56/285 (19%), Positives = 106/285 (37%), Gaps = 27/285 (9%) Frame = +3 Query: 88 VTLVDCPGHASLIRTIIGGAQII--DLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVL 145 V D GH +RT + G D +ML + G+ + E L + VV+ Sbjct: 34116 VAFADLAGHERYLRTTLTGLTRSHPDFVMLAVGANAGLSGMAVEHLDVTLALSVPTFVVV 34295 Query: 146 NKIDLLPEGKRQAAIDKMTKKM----------------QKTLENTKFRGAPIIPVXXXXX 189 K+D+ P+ R+A + + K + + + + I P+ Sbjct: 34296 TKVDMAPKRVRKATLKAIAKHVRAPGVSKMPVMVRSEEEAMVAARNILSSRITPIFEVSS 34475 Query: 190 XXXXXXXXXXXXIPELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGS 249 + L+ L T ++ + P +++ F + G GTV++G + +G+ Sbjct: 34476 VSGAGLATLKTFL-NLLPLKTDWAAVQSAPPE----FAIEETFVVAGVGTVVSGVVRAGT 34640 Query: 250 ISLGDSVEI---------PALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLER 300 I GDS+ + P + VKS+Q+ + G + + + + + + Sbjct: 34641 IVAGDSLLLGPDSTGGFTPVI-----VKSIQVARSSAKAVAAGQTASLALKRVKRQAVGK 34805 Query: 301 GLVCAPESLHTVHAALISVEKIPYFRGPLQTKAKFHITVGHETVM 345 G++ L A E + R +F I VGHE V+ Sbjct: 34806 GMMLLDAGL----APQAHYEFEAHIRA---FSTRFPIRVGHEAVI 34919 >gb|GL349460.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.28, whole genome shotgun sequence Length = 422706 Score = 74.7 bits (182), Expect = 2e-13 Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 10/202 (4%) Frame = +3 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGM-QTQSAECLVIGQI-ACQKLVVVL 145 V+ VDCPGH L+ T++ GA ++D +L++ + Q Q++E L +I Q ++++ Sbjct: 306465 VSFVDCPGHDILMATMLNGAAVMDAALLLVAANESCPQPQTSEHLAAIEIMRLQHILIMQ 306644 Query: 146 NKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIPEL 205 NK+DL+ +Q+ ++ K++Q ++ T GAP++P+ I + Sbjct: 306645 NKVDLI----KQSQAEEQHKQIQAFVKGTVADGAPVVPI----------SAQLKYNIDVV 306782 Query: 206 IELLTSQISIPTRDPSGPFLMSVDHCFSIKG--------QGTVMTGTILSGSISLGDSVE 257 E + ++I +P RD + L+ V F I +G V G+IL G + +GD +E Sbjct: 306783 CEYICTRIPVPARDFTSAPLLIVIRSFDINKPGCAVDELKGGVAGGSILKGVLKVGDEIE 306962 Query: 258 IPALKVVKKVKSMQMFHMPITS 279 + +V K Q+ PI S Sbjct: 306963 VRP-GIVSKNAEGQVQVQPILS 307025 >gb|GL349467.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.35, whole genome shotgun sequence Length = 361230 Score = 65.5 bits (158), Expect = 1e-10 Identities = 74/312 (23%), Positives = 115/312 (36%), Gaps = 47/312 (15%) Frame = +3 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 D + RERGIT+D S F ++ D PGH Sbjct: 302196 DTSKEERERGITIDCQTSSFRTT-------------------------NYDYSITDAPGH 302300 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAE---CLVIGQ----------IACQKLVV 143 A I +I GA D+ +L++ + A+ + GQ + ++LVV Sbjct: 302301 ADFITNMITGAGQADVAVLMVPADGNFEASIAKPSGMMAGGQTRQHANLANLLGIKQLVV 302480 Query: 144 VLNKIDLLPEGK-RQAAIDKMTKKMQKTLENTKFRGA--PIIPVXXXXXXXXXXXXXXXX 200 +NK+D G +A +++ ++ + ++ F A PIIPV Sbjct: 302481 CVNKMDSSEGGAYNEARFNEIRDEVSRMIDEAGFHSATVPIIPVSGWVGDNLTSPTENMP 302660 Query: 201 XI----------------------------PELIELLTSQISIPTRDPSGPFLMSVDHCF 232 L+E L + + IP RD +GP +SV Sbjct: 302661 WYNGWSGRYGYTAKRKKKGFEIVGGTEIKGKTLVEALDNYMRIPDRDANGPLHLSVSGSR 302840 Query: 233 SIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICV-- 290 I GQG V G I G+I D V + + K S+QM H + + + G +GI V Sbjct: 302841 LIPGQGLVTMGRIEIGTIRKDDVVALARNGLSGKTFSIQMHHQDVDAGIAGFNVGIVVKF 303020 Query: 291 -TQFDPKLLERG 301 PK ++RG Sbjct: 303021 PKGTKPKQVKRG 303056 >gb|GL349450.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.18, whole genome shotgun sequence Length = 527020 Score = 65.5 bits (158), Expect = 1e-10 Identities = 74/312 (23%), Positives = 115/312 (36%), Gaps = 47/312 (15%) Frame = +3 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 D + RERGIT+D S F ++ D PGH Sbjct: 477927 DTSKEERERGITIDCQTSSFRTT-------------------------NYDYSITDAPGH 478031 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAE---CLVIGQ----------IACQKLVV 143 A I +I GA D+ +L++ + A+ + GQ + ++LVV Sbjct: 478032 ADFITNMITGAGQADVAVLMVPADGNFEASIAKPSGMMAGGQTRQHANLANLLGIKQLVV 478211 Query: 144 VLNKIDLLPEGK-RQAAIDKMTKKMQKTLENTKFRGA--PIIPVXXXXXXXXXXXXXXXX 200 +NK+D G +A +++ ++ + ++ F A PIIPV Sbjct: 478212 CVNKMDSSEGGAYNEARFNEIRDEVSRMIDEAGFHSATVPIIPVSGWVGDNLTSPTENMP 478391 Query: 201 XI----------------------------PELIELLTSQISIPTRDPSGPFLMSVDHCF 232 L+E L + + IP RD +GP +SV Sbjct: 478392 WYNGWSGRYGYTAKRKKKGFEIVGGTEIKGKTLVEALDNYMRIPDRDANGPLHLSVSGSR 478571 Query: 233 SIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICV-- 290 I GQG V G I G+I D V + + K S+QM H + + + G +GI V Sbjct: 478572 LIPGQGLVTMGRIEIGTIRKDDVVALARNGLSGKTFSIQMHHQDVDAGIAGFNVGIVVKF 478751 Query: 291 -TQFDPKLLERG 301 PK ++RG Sbjct: 478752 PKGTKPKQVKRG 478787 Score = 65.5 bits (158), Expect = 1e-10 Identities = 74/312 (23%), Positives = 115/312 (36%), Gaps = 47/312 (15%) Frame = +2 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 D + RERGIT+D S F ++ D PGH Sbjct: 497993 DTSKEERERGITIDCQTSSFRTT-------------------------NYDYSITDAPGH 498097 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAE---CLVIGQ----------IACQKLVV 143 A I +I GA D+ +L++ + A+ + GQ + ++LVV Sbjct: 498098 ADFITNMITGAGQADVAVLMVPADGNFEASIAKPSGMMAGGQTRQHANLANLLGIKQLVV 498277 Query: 144 VLNKIDLLPEGK-RQAAIDKMTKKMQKTLENTKFRGA--PIIPVXXXXXXXXXXXXXXXX 200 +NK+D G +A +++ ++ + ++ F A PIIPV Sbjct: 498278 CVNKMDSSEGGAYNEARFNEIRDEVSRMIDEAGFHSATVPIIPVSGWVGDNLTSPTENMP 498457 Query: 201 XI----------------------------PELIELLTSQISIPTRDPSGPFLMSVDHCF 232 L+E L + + IP RD +GP +SV Sbjct: 498458 WYNGWSGRYGYTAKRKKKGFEIVGGTEIKGKTLVEALDNYMRIPDRDANGPLHLSVSGSR 498637 Query: 233 SIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICV-- 290 I GQG V G I G+I D V + + K S+QM H + + + G +GI V Sbjct: 498638 LIPGQGLVTMGRIEIGTIRKDDVVALARNGLSGKTFSIQMHHQDVDAGIAGFNVGIVVKF 498817 Query: 291 -TQFDPKLLERG 301 PK ++RG Sbjct: 498818 PKGTKPKQVKRG 498853 Score = 52.4 bits (124), Expect = 9e-07 Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 3/100 (3%) Frame = +3 Query: 205 LIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVV 264 L+E L + + IP RD +GP +SV I GQG V G I G+I D V + + Sbjct: 480186 LVEALDNYMRIPDRDANGPLHLSVSGSRLIPGQGLVTMGRIEIGTIRKDDVVALARNGLS 480365 Query: 265 KKVKSMQMFHMPITSAMQGDRLGICV---TQFDPKLLERG 301 K S+QM H + + + G +GI V PK ++RG Sbjct: 480366 GKTFSIQMHHQDVDAGIAGFNVGIVVKFPKGTKPKQVKRG 480485 Score = 32.7 bits (73), Expect = 0.73 Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 13/126 (10%) Frame = +1 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 D + RERGIT+D S F ++ D PGH Sbjct: 479626 DTSKEERERGITIDCQTSSFRTT-------------------------NYDYSITDAPGH 479730 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAE---CLVIGQ----------IACQKLVV 143 A I +I GA D+ +L++ + A+ + GQ + ++LVV Sbjct: 479731 ADFITNMITGAGQADVAVLMVPADGNFEASIAKPSGMMAGGQTRQHANLANLLGIKQLVV 479910 Query: 144 VLNKID 149 +NK+D Sbjct: 479911 CVNKMD 479928 Score = 30.4 bits (67), Expect = 3.6 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 4/77 (5%) Frame = -1 Query: 412 ALVEFEKPVTCPRLCLVIGSRLDA--DIHTNTCRLAFHGILLHGLEDRNYADSFLPRLKV 469 A+V+ + PR+ ++ + LD ++H N CRLA G + + L+ LP L V Sbjct: 101890 AVVKVPAEMNAPRVTVLGLTLLDVVQNVHLNFCRLAVLGDVANDLDGHP-----LPPLVV 101726 Query: 470 YKLKH--KHGLVERAMD 484 +L H K L E+ +D Sbjct: 101725 PRLNHFAKRALTEQRLD 101675 >gb|GL349434.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.2, whole genome shotgun sequence Length = 680870 Score = 60.8 bits (146), Expect = 3e-09 Identities = 57/246 (23%), Positives = 95/246 (38%), Gaps = 12/246 (4%) Frame = -3 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 D + R RGIT+D+ +CF P +TL+D PGH Sbjct: 582279 DAHEEERARGITMDVAVTCFQTP-------------------------NKDITLLDAPGH 582175 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKGM---------QTQSAECLVIGQIACQKLVVVLNK 147 + +I GA D +LV+ KG QT+ L + + + +VV +NK Sbjct: 582174 RDYVPNMITGAAQADAAILVVSAAKGEFEAGFDADGQTKEHTHL-LRSLGVRHIVVAVNK 581998 Query: 148 IDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIPELIE 207 +D + G + + +++ L + FR P +P+ Sbjct: 581997 MDAI--GWDADRFNAIRATLKRFLRSMGFRSVPFVPLSGLEGVNLLEPAPDAMPWYTGAP 581824 Query: 208 LLTSQISI--PTRDPSGPFLMSVDHCFS-IKGQGTVMTGTILSGSISLGDSVEIPALKVV 264 LL + S+ P RD PF M + + + G + G I +G++ L D V + + Sbjct: 581823 LLATIDSLPPPARDVDAPFRMPITDAYKPMASSGATVAGKIETGTVRLDDQVLLLPGGEI 581644 Query: 265 KKVKSM 270 VKS+ Sbjct: 581643 HMVKSI 581626 >gb|GL349465.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.33, whole genome shotgun sequence Length = 407772 Score = 49.7 bits (117), Expect = 6e-06 Identities = 25/68 (36%), Positives = 38/68 (55%) Frame = +2 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 +T+VD PGHA+ +D M+LV+D T+GM Q+ E L + + VV NK Sbjct: 299768 LTVVDTPGHAAFFHMREHSVLALDAMVLVVDATQGMGEQTLEVLTAAAVEKLPVFVVANK 299947 Query: 148 IDLLPEGK 155 +D+L G+ Sbjct: 299948 MDMLGSGE 299971 >gb|GL349483.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.51, whole genome shotgun sequence Length = 286273 Score = 48.9 bits (115), Expect = 1e-05 Identities = 62/288 (21%), Positives = 121/288 (42%), Gaps = 15/288 (5%) Frame = +3 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 D Q R+RG T+++G + FS + T++D PGH Sbjct: 246165 DTTEQERDRGKTVEVGRASFST-------------------------GSKRFTILDAPGH 246269 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKG-MQT------QSAECLVIGQIA-CQKLVVVLNKI 148 + I +IGGA D+ +LV+ KG +T Q+ E ++ + A ++L+VV+NK+ Sbjct: 246270 KAYIPHMIGGASQADVGVLVVSSRKGEFETGFDRGGQTREHAMLAKTAGVKQLIVVINKM 246449 Query: 149 DLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXI------ 202 D + ++ KK++ L+ + + ++ + + Sbjct: 246450 DDESVNWSKDRFMEIVKKIKPYLKGVGYSKSDLVFMPVSGLAGYNLKEPIPEGLCPWYKG 246629 Query: 203 PELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALK 262 P L+ LL Q+ P R + + S + G V+ G + +G+I+ G ++ + + Sbjct: 246630 PPLLTLL-EQLRPPQRLMDAALRLPI--ADSYRDMGVVVMGKLEAGTIANGANLVLMPNQ 246800 Query: 263 VVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLV-CAPESL 309 + +V + + + GD L I + D ++ G V C P++L Sbjct: 246801 MPVEVIGLWIDEYEVEVGEPGDNLKIKLKGVDEGDVKNGFVLCEPDNL 246944 >gb|GL349461.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.29, whole genome shotgun sequence Length = 406166 Score = 48.1 bits (113), Expect = 2e-05 Identities = 48/237 (20%), Positives = 99/237 (41%), Gaps = 22/237 (9%) Frame = +2 Query: 88 VTLVDCPGHASLIRTIIGGAQIID--LMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVL 145 +T +D GH ++T + G ++ M+++ G+ + E + I + +V+ Sbjct: 111746 ITFLDLAGHERYLKTTLFGLTGMNPSYAMMMVGANAGVIGMTKEHMSIALALKVPVYMVV 111925 Query: 146 NKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIP-- 203 KID+ P + + +++ K +++ R PI+ P Sbjct: 111926 TKIDMAPPN----VLKRTLRQLSKLVKSPGARKVPIVVKTMDDVVVAARSFLMHRICPIF 112093 Query: 204 -------ELIELLTSQISI-PTRDP-----SGPFLMSVDHCFSIKGQGTVMTGTILSGSI 250 E ++LL + I++ P R P + +D FS+ G G V++GT+LSG + Sbjct: 112094 LVSNVTGENLDLLRAFINLLPARTEWSQLTEAPAEVCIDDTFSVPGVGCVVSGTVLSGGV 112273 Query: 251 SLGDSV-----EIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGL 302 + GDS+ A + V +KS+++ P + G + + + +G+ Sbjct: 112274 TAGDSLLLGPNAFGAFEPV-TIKSIEVRRHPTKAVTAGRSASFALKKIKRSAIRKGM 112441 >gb|GL349495.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.63, whole genome shotgun sequence Length = 205260 Score = 47.8 bits (112), Expect = 2e-05 Identities = 42/179 (23%), Positives = 74/179 (41%), Gaps = 5/179 (2%) Frame = -3 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGHA + +D ++L++D +G+Q Q+ + A +V VLNK Sbjct: 52771 LNLIDTPGHADFGLEVARSLAAVDGVLLLVDAAQGVQAQTLAVARLAAAARLAIVPVLNK 52592 Query: 148 IDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIPELIE 207 IDL A ID + ++ TL + +PEL++ Sbjct: 52591 IDL-----PAADIDGTLEALEATL-----------GIDPESPDICLVSAKTGEGVPELLD 52460 Query: 208 LLTSQISIPTRDPSGPFLMSVDHCFSIKG-----QGTVMTGTILSGSISLGDSVEIPAL 261 +L I P+ P P L + + +G V + +++G +S G ++ AL Sbjct: 52459 VLVRAIPPPSPLPLPPHLADLPLAVAFDSRYDTFRGIVASVAVMAGELSAGTALAPLAL 52283 >gb|GL349435.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.3, whole genome shotgun sequence Length = 673526 Score = 38.1 bits (87), Expect = 0.017 Identities = 16/64 (25%), Positives = 34/64 (53%) Frame = +2 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + ++D PGH ++ + ++ D ++LV+D +G+ + + LV+V+NK Sbjct: 95876 LNIMDTPGHVAMRGEVAPALRVADGVVLVVDAVEGLLARGKALIAAAAAGALPLVLVINK 96055 Query: 148 IDLL 151 +D L Sbjct: 96056 LDRL 96067 Score = 37.0 bits (84), Expect = 0.039 Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 4/117 (3%) Frame = -3 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 D PQ RGIT++ ++ LP R ++ ++D PGH Sbjct: 146565 DYLPQEMARGITINAA----AITLPWR---------------------EHEINVIDTPGH 146461 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKGMQTQS----AECLVIGQIACQKLVVVLNKID 149 + A+++D +LV+D G+Q Q+ A+C G VV +NK+D Sbjct: 146460 VDFTAEVERSARVLDGAVLVVDAVSGVQAQTLRVWAQCEKYG----IPTVVFVNKMD 146302 >gb|GL349437.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.5, whole genome shotgun sequence Length = 654703 Score = 37.4 bits (85), Expect = 0.030 Identities = 20/62 (32%), Positives = 34/62 (54%) Frame = -3 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 VT +D PGHA+ A + D+++LV+ G++ Q+ E + + LVV +NK Sbjct: 268862 VTFIDTPGHAAFDGIRSRSALLTDIIVLVVAADDGVKPQTEEVIRHAKREGVPLVVAINK 268683 Query: 148 ID 149 +D Sbjct: 268682 MD 268677 >gb|GL349459.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.27, whole genome shotgun sequence Length = 436348 Score = 35.8 bits (81), Expect = 0.086 Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 8/121 (6%) Frame = +2 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 D RERG T ++G + P AR +V L+D PGH Sbjct: 187604 DSTEFERERGKTCEIGRAALVTPGTAR-----------------------KVALLDAPGH 187714 Query: 97 ASLIRTIIGGAQIIDLMMLVI-----DVTKGMQTQ---SAECLVIGQIACQKLVVVLNKI 148 + + +IGGA D +LV+ + +G + C++ + ++V +NK+ Sbjct: 187715 DAFVPHMIGGAVQADAGLLVVSARATEFEEGFDARGQTKEHCVLARAAGLKHIIVAVNKM 187894 Query: 149 D 149 D Sbjct: 187895 D 187897 >gb|GL349463.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.31, whole genome shotgun sequence Length = 395032 Score = 35.4 bits (80), Expect = 0.11 Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 16/129 (12%) Frame = +1 Query: 37 DKQPQSRERGITL-DLGFS-CFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTL---- 90 D P +ERG+T+ G + C+ VP+P + S+ T+ Sbjct: 145873 DTLPDEKERGVTIKSTGITLCYDVPVPDFVPSAGSFDSGDAASAGASAGAQADATVAPGN 146052 Query: 91 --------VDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECL--VIGQIACQK 140 +D PGH + ++ D ++V+D +G + Q+ L +G++ + Sbjct: 146053 AMPFVINVIDSPGHIDFSAEVTASLRLTDGAIVVVDCVEGPRVQTKMVLRQALGELV-KP 146229 Query: 141 LVVVLNKID 149 V+ +NK+D Sbjct: 146230 AVLCINKVD 146256 >gb|GL349433.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.1, whole genome shotgun sequence Length = 716227 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/62 (25%), Positives = 31/62 (50%) Frame = +3 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + ++ D ++V+D +G+ Q+ L K V+++NK Sbjct: 91725 INLIDSPGHVDFSSEVSAALRVTDGALVVVDCVEGVCVQTETVLRQALGERIKPVLMVNK 91904 Query: 148 ID 149 +D Sbjct: 91905 MD 91910 >gb|GL349493.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.61, whole genome shotgun sequence Length = 239416 Score = 31.6 bits (70), Expect = 1.6 Identities = 17/64 (26%), Positives = 31/64 (48%) Frame = +2 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + + + D ++++DV +G+ Q+ L ++V NK Sbjct: 81140 INLIDSPGHLDFAQEVSTAVRNCDGALVLVDVLEGVSKQTHGVLEQAWREQLTPILVFNK 81319 Query: 148 IDLL 151 ID L Sbjct: 81320 IDRL 81331 >gb|GL349477.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.45, whole genome shotgun sequence Length = 310545 Score = 31.2 bits (69), Expect = 2.1 Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 4/79 (5%) Frame = -2 Query: 501 QLFVGLKVHLSTGELGIIDSAFGQSGKFKIHIPGGLSPESKKILTPALKKRARAG----R 556 +L G KV G +A G +G + +PGG +PES+ PA RAR G R Sbjct: 103010 RLAAGGKVRTRAGRGADARTACGDAGAVPV-LPGGSAPESE----PAHGTRARRGLRRRR 102846 Query: 557 GEATRQEESAERSEPSQHV 575 A R+ RS +HV Sbjct: 102845 WGAARRTAGQRRSGKPRHV 102789 Database: T.trahens/genome.fa Posted date: Feb 9, 2011 9:02 AM Number of letters in database: 28,680,627 Number of sequences in database: 131 Lambda K H 0.321 0.137 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,919,434 Number of Sequences: 131 Number of extensions: 291915 Number of successful extensions: 1643 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 1446 Number of HSP's gapped (non-prelim): 404 length of query: 596 length of database: 9,560,209 effective HSP length: 105 effective length of query: 491 effective length of database: 9,546,454 effective search space: 4687308914 effective search space used: 4687308914 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 63 (28.9 bits)