TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000038_1.0 # Protein # Eukaryotic elongation factor
(eEFSec) # Homo sapiens # Complete
         (596 letters)

Database: C.owczarzaki/genome.fa 
           89 sequences; 28,043,798 total letters

Searching........................................................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

supercontig_1.5 of Capsaspora owczarzaki ATCC 30864                   177   2e-78
supercontig_1.2 of Capsaspora owczarzaki ATCC 30864                   110   3e-24
supercontig_1.16 of Capsaspora owczarzaki ATCC 30864                   61   2e-09
supercontig_1.17 of Capsaspora owczarzaki ATCC 30864                   48   2e-05
supercontig_1.3 of Capsaspora owczarzaki ATCC 30864                    42   0.001
supercontig_1.1 of Capsaspora owczarzaki ATCC 30864                    42   0.001
supercontig_1.7 of Capsaspora owczarzaki ATCC 30864                    39   0.010
supercontig_1.6 of Capsaspora owczarzaki ATCC 30864                    39   0.010
supercontig_1.11 of Capsaspora owczarzaki ATCC 30864                   38   0.017
supercontig_1.13 of Capsaspora owczarzaki ATCC 30864                   35   0.14 
supercontig_1.15 of Capsaspora owczarzaki ATCC 30864                   34   0.32 
supercontig_1.8 of Capsaspora owczarzaki ATCC 30864                    33   0.42 
supercontig_1.9 of Capsaspora owczarzaki ATCC 30864                    31   2.1  

>supercontig_1.5 of Capsaspora owczarzaki ATCC 30864
          Length = 1755934

 Score =  177 bits (449), Expect(3) = 2e-78
 Identities = 139/471 (29%), Positives = 208/471 (44%), Gaps = 130/471 (27%)
 Frame = -3

Query: 255   SVEIPALKVVKKVKSMQMFHMPIT------------------------------------ 278
             ++EIP  K+ +K+KS+QMFH P+                                     
Sbjct: 66953 NIEIPTAKLSRKIKSIQMFHRPVQQITAVKEASDSKGRS*TFGLFFFFCFFVFVSCNQKA 66774

Query: 279   ---SAMQGDRLGICVTQFDPKLLERGLVCAPESLHTVHAALISVEKIPYFRGPLQTKAKF 335
                +  QGDR GICVTQFD   LERG  CA  ++   HA +  V+K+ +F+ P+ +K++F
Sbjct: 66773 DLLAKTQGDRAGICVTQFDASTLERGYACAAGAVIFAHALIARVDKVRFFKLPVLSKSRF 66594

Query: 336   HITVGHETVMGRLMFFSPAPDNFDQEPILDSFNFSQEYLFQEQYLSKDLT---------- 385
             H       + G +     +     Q P +    + + +        K ++          
Sbjct: 66593 HGRRASLKLTGGVCGLI*SSGAPAQCPWVTKL*WERPHSLHAVSKQKSVSGEAAWPF*PF 66414

Query: 386   -----PAVTDND-----EADKKAGQATEGHCPRQQ--------------WALVEFEKPVT 421
                   A  D +     E DK+   A E   P Q+              +AL+E + PV 
Sbjct: 66413 YSCVVRASLDGEGNARFEVDKEYAFAEELGRPPQENASNSGQPPAPLATFALIELDHPVA 66234

Query: 422   CPRLCLVIGSR--LDADIHTNTCRLAFHGILLHGLEDRNYADSFLPRLKVYKLKHKHGLV 479
             C    L+IGSR  LD D+HT  CRLAF G +   L D++Y ++FLP+LKV+K K + G V
Sbjct: 66233 CLSNALLIGSRLDLDPDVHTKACRLAFSGRVHEALTDKSYRETFLPKLKVFKRKSRTGTV 66054

Query: 480   ERA----------------------------------MDDYSVIGRSLFKKETNIQLFVG 505
             ER                                   +DDY++IG+ LFKKET ++ F+G
Sbjct: 66053 ERVRAPRVLVLPMGVFPHSQFAVLMPVLFCATTQTQILDDYTLIGKGLFKKETTLEPFLG 65874

Query: 506   LKVHLST---------------------GELGIIDSAFGQSGKFKIHIPGGLSPESKKIL 544
             L+V LS+                     GE+G I+ AFGQSGKF++ +   +S  +K  L
Sbjct: 65873 LQVGLSSGKQVELETSVACRSDSKASPAGEVGEIEGAFGQSGKFRVRMRQAVSDATKATL 65694

Query: 545   TPALKKRARAGRGEATRQEESAERSEPSQHVVLSLTFKRYVFDTHKRMVQS 595
               + K +   G+G+A   E  A        + + L+FKRYV+D  KRM+QS
Sbjct: 65693 AASDKPK---GKGKAPAPEAEA--------IEIVLSFKRYVYDRQKRMIQS 65574



 Score =  100 bits (250), Expect(3) = 2e-78
 Identities = 65/160 (40%), Positives = 77/160 (48%), Gaps = 62/160 (38%)
 Frame = -3

Query: 87    QVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAE----------------- 129
             Q TLVDCPGHA LIRTIIGGAQIID+MMLV+DV KG+QTQ+AE                 
Sbjct: 67781 QFTLVDCPGHADLIRTIIGGAQIIDMMMLVVDVNKGIQTQTAEVRTHNLSLSGFARMLLT 67602

Query: 130   -------------CLVIGQIACQKLVVVLNKIDLLPEGKRQAAIDK-------------- 162
                          CLVIG+I C  LVV LNKID +PE +R   I+K              
Sbjct: 67601 LARNPPPSSRLAQCLVIGEIMCDILVVALNKIDQIPEDQRAQTIEKARLA*NERSSFLCS 67422

Query: 163   ------------------MTKKMQKTLENTKFRGAPIIPV 184
                               +T+ + KT   TKF    +IPV
Sbjct: 67421 LLTWGGGFRAVPTTVWMQVTRGLAKTFATTKFGQVAVIPV 67302



 Score = 55.5 bits (132), Expect(3) = 2e-78
 Identities = 23/48 (47%), Positives = 33/48 (68%)
 Frame = -2

Query: 207   ELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGD 254
             ++L   +     D + PF+ +VDHCF+IKGQGTV+TGT LSG I + +
Sbjct: 67182 QVLAKSVPRQRHDSAAPFVFAVDHCFAIKGQGTVLTGTALSGQIQVNE 67039



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 21/30 (70%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
 Frame = -2

Query: 36    FDKQPQSRERGITLDLGFSCFSV-PLPARL 64
             FDK PQS+ RGITLDLGFS  SV P+P  L
Sbjct: 68016 FDKNPQSQARGITLDLGFSSLSVTPMPEHL 67927


>supercontig_1.2 of Capsaspora owczarzaki ATCC 30864
          Length = 2668053

 Score =  110 bits (275), Expect = 3e-24
 Identities = 79/226 (34%), Positives = 117/226 (51%), Gaps = 7/226 (3%)
 Frame = +2

Query: 91      VDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIG-QIACQKLVVVLNKID 149
               VDCPGHA  I+ +I GA  +D  +LV+  T G   Q+ E L++  Q+  + LVV +NK D
Sbjct: 2000582 VDCPGHADYIKNMITGAAQMDGAILVVAGTDGQMPQTREHLLLAKQVGVKALVVYINKAD 2000761

Query: 150     LLPEGKRQAAIDKMTKKMQKTLENTKFRG--APIIPVXXXXXXXXXXXXXXXXXIPELIE 207
                + E K Q  + +M  +M++ L   KF G   PII                   I +L++
Sbjct: 2000762 AVAE-KDQLELVEM--EMREILNEYKFDGDNTPIIIGSALCALEDREPELGRQSILKLLD 2000932

Query: 208     LLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPAL---KVV 264
                + + I  P+RD   PFLMS++  FSI G+GTV TG +  G ++ GD VEI       + 
Sbjct: 2000933 AVDNFIPQPSRDLDKPFLMSIEDVFSIGGRGTVATGRVERGIVNKGDEVEIVGFGTTPIK 2001112

Query: 265     KKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERG-LVCAPESL 309
                 V  ++MFH  +     GD LG  +     + L RG ++CAP +L
Sbjct: 2001113 TTVTGLEMFHKQLERGEAGDNLGALLRGVKREDLRRGHMICAPGTL 2001250


>supercontig_1.16 of Capsaspora owczarzaki ATCC 30864
          Length = 797998

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 67/292 (22%), Positives = 110/292 (37%), Gaps = 25/292 (8%)
 Frame = -3

Query: 37     DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96
              DK    RERGIT+D+    F                               VT++D PGH
Sbjct: 232604 DKLKAERERGITIDIALWKFETS-------------------------KFYVTIIDAPGH 232500

Query: 97     ASLIRTIIGGAQIIDLMMLVI---------DVTKGMQTQSAECLVIGQIACQKLVVVLNK 147
                 I+ +I G    D  +L++          ++K  QT+    L+   +  ++L+V +NK
Sbjct: 232499 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKDGQTRE-HALLAYTLGVKQLIVGINK 232323

Query: 148    IDLLP--EGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIP-- 203
              +D +   E +    + +++  ++K   + K      +P+                     
Sbjct: 232322 MDSIKFAEERYNEIVTEVSNYIKKIGYDPKT--VAFVPISGWHGDNMLEASENMPWFKGW 232149

Query: 204    ------------ELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSIS 251
                           LIE L + IS P R    P  + +   + I G GTV  G + +G + 
Sbjct: 232148 TIERKEGNASGKTLIEALDA-ISPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 231972

Query: 252    LGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLV 303
               G  V      V  +VKS++M H  +  A  GD +G  V     K + RG V
Sbjct: 231971 PGMVVTFAPSNVTTEVKSVEMHHESLPEANPGDNVGFNVKNVAVKDIRRGNV 231816


>supercontig_1.17 of Capsaspora owczarzaki ATCC 30864
          Length = 792894

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 9/152 (5%)
 Frame = +3

Query: 37     DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96
              D  P  RE+G T+++G + F                              + T++D PGH
Sbjct: 585975 DTNPDEREKGKTVEVGRATFGTS-------------------------KKRFTILDAPGH 586079

Query: 97     ASLIRTIIGGAQIIDLMMLVIDVTKGM---------QTQSAECLVIGQIACQKLVVVLNK 147
               S +  +IGGA   D+ +LVI   KG          QT+    +++     + LVVV+NK
Sbjct: 586080 KSYVPNMIGGAAQADVAVLVISARKGEFETGFERGGQTRE-HAMLVKTAGVKHLVVVINK 586256

Query: 148    IDLLPEGKRQAAIDKMTKKMQKTLENTKFRGA 179
              +D    G  Q   D+   K+   L+   +  A
Sbjct: 586257 MDDPTVGWAQERYDECVSKLTPYLKQCGYNTA 586352


>supercontig_1.3 of Capsaspora owczarzaki ATCC 30864
          Length = 2526540

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 34/169 (20%), Positives = 68/169 (40%)
 Frame = +3

Query: 88     VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147
              + L+D PGH      +          +L++D  +G+Q Q+    ++   +   +V VLNK
Sbjct: 102420 INLIDTPGHVDFSYEVSRSLYACQGCILLVDAAQGIQAQTVANFMLAFDSNLSIVPVLNK 102599

Query: 148    IDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIPELIE 207
              IDLL      A   ++TK+MQ            I                    I +++ 
Sbjct: 102600 IDLL-----HADAARVTKQMQSVFGTEPEEALRI-------------SAKTNLGIDQVLP 102725

Query: 208    LLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSV 256
               +  ++  P+ +P  P  + +   +    +G V    ++ GS+ +G+ +
Sbjct: 102726 AIIDRVPPPSGNPDAPPKVLLFDSWYDDFRGVVCLIAVVDGSLKVGEKI 102872


>supercontig_1.1 of Capsaspora owczarzaki ATCC 30864
          Length = 3794667

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 19/60 (31%), Positives = 34/60 (56%)
 Frame = -1

Query: 90      LVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKID 149
               ++D PGH S       G+ + D+ +LV+D+  G++ Q+ E + + +      VV LNK+D
Sbjct: 3383196 IIDTPGHESFSNLRSRGSSLCDIAILVVDIMHGLEPQTIESINLLKKMKTPFVVALNKVD 3383017



 Score = 33.1 bits (74), Expect = 0.55
 Identities = 16/62 (25%), Positives = 30/62 (48%)
 Frame = +1

Query: 88      VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147
               + L+D PGH      +    ++ D  ++V+D   G+  Q+   L        K V+++NK
Sbjct: 1294534 INLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLMMNK 1294713

Query: 148     ID 149
               +D
Sbjct: 1294714 MD 1294719



 Score = 29.3 bits (64), Expect = 7.9
 Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
 Frame = +1

Query: 413    LVEFEKPVTCPRLCLVIGSRLDADIHTNTCRLAFHGILL--HGLEDRNYADSFLPRLKVY 470
              LVE  K V   R  LV+G  L+A +       A  G L   H L DR  + +    L   
Sbjct: 227989 LVEGHKLVNAERTQLVVGQALEAALQLGEVD-AREGNLQQPHKLGDRQSSRALRVALPKV 228165

Query: 471    KLKHKHGLVERAMDDYSVIGRSLFKKETNIQLFVGLKVHLSTGELGIIDS 520
                +  HGL +RA+   +V+G     +   +   V     L  G +G +D+
Sbjct: 228166 ADERVHGLADRALRS-NVLGLGFLGERFRVAAVVHGAGRLRNGCVGAVDA 228312


>supercontig_1.7 of Capsaspora owczarzaki ATCC 30864
          Length = 1544042

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 8/126 (6%)
 Frame = -3

Query: 141    LVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXX 200
              ++++ NKIDL+    R+A   +  +++ K ++ T  +GAPIIP+                
Sbjct: 697167 IIILQNKIDLV----REAQALEQHQEILKFVDGTVAQGAPIIPI----------SAQLKY 697030

Query: 201    XIPELIELLTSQISIPTRDPSGPFLMSVDHCFSIKG--------QGTVMTGTILSGSISL 252
               I  + E + ++I IP RD +    + V   F +          +G V  G+IL G +  
Sbjct: 697029 NIDCVCEYIANKIPIPVRDFTAAPRLIVIRSFDVNKPGAEVDDLKGGVAGGSILVGVLKA 696850

Query: 253    GDSVEI 258
              G  +E+
Sbjct: 696849 GQEIEV 696832


>supercontig_1.6 of Capsaspora owczarzaki ATCC 30864
          Length = 1617845

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
 Frame = -2

Query: 87      QVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDV---------TKGMQTQSAECLVIGQIA 137
               ++TL+D PGH   I  +I GA   D+ +LV++            G QT+    L++  + 
Sbjct: 1409206 RITLLDAPGHRDFIPNMISGAAQADVAVLVVNAGVGEFEAGFEGGGQTRE-HALLVRSLG 1409030

Query: 138     CQKLVVVLNKID 149
                 +L+V +NK+D
Sbjct: 1409029 VNQLIVAVNKLD 1408994



 Score = 35.0 bits (79), Expect = 0.14
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -1

Query: 208     LLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEI 258
               L + Q   P R    P   SV+  FS    G  + G ++SGS+ +GD V I
Sbjct: 1408613 LASDQFQPPERPIDKPLRFSVNDIFSRPNSGVSLGGKVISGSVQIGDKVLI 1408461


>supercontig_1.11 of Capsaspora owczarzaki ATCC 30864
          Length = 1292811

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 9/122 (7%)
 Frame = +3

Query: 37     DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96
              DK    RERGIT+D+    F                               VT++D PGH
Sbjct: 611094 DKLKAERERGITIDIALWKFETS-------------------------KFYVTIIDAPGH 611198

Query: 97     ASLIRTIIGGAQIIDLMMLVI---------DVTKGMQTQSAECLVIGQIACQKLVVVLNK 147
                 I+ +I G    D  +L++          ++K  QT+    L+   +  ++L+V +NK
Sbjct: 611199 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKDGQTRE-HALLAYTLGVKQLIVGINK 611375

Query: 148    ID 149
              +D
Sbjct: 611376 MD 611381


>supercontig_1.13 of Capsaspora owczarzaki ATCC 30864
          Length = 955311

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 19/64 (29%), Positives = 34/64 (53%)
 Frame = +1

Query: 88     VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147
              + L+D PGH      +    ++ D  ++++DV +G+  Q+   L    +   K V+VLNK
Sbjct: 236941 LNLIDSPGHVDFSSEVSTAVRLSDGAVVLVDVVEGVCPQTHAVLRQAWLEGIKPVLVLNK 237120

Query: 148    IDLL 151
              +D L
Sbjct: 237121 MDRL 237132


>supercontig_1.15 of Capsaspora owczarzaki ATCC 30864
          Length = 930169

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = +3

Query: 88    VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147
             + L+D PGH      +    ++ D  ++V+D   G+  Q+   L        K V++LNK
Sbjct: 67080 INLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAITERIKPVLMLNK 67259

Query: 148   ID 149
             +D
Sbjct: 67260 MD 67265


>supercontig_1.8 of Capsaspora owczarzaki ATCC 30864
          Length = 1512001

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
 Frame = -1

Query: 231    CFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVK----KVKSMQMFHMPITSAMQGDRL 286
              C   KG GTV++GT+++G I   D++ +    +      ++K++Q   +P+     G   
Sbjct: 378199 CCHAKGVGTVISGTVMAGVIRSTDTLYLGPDTLGNFQPVQLKTIQRKRLPVRDVRAGQAA 378020

Query: 287    GICVTQFDPKLLERGLVCAPESLH 310
                 + +     + +G+V   +  H
Sbjct: 378019 SFALKKIKRSAIRKGMVLLAKDAH 377948



 Score = 32.3 bits (72), Expect = 0.94
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = -2

Query: 90      LVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVI 133
               L+D PGHA+     +   ++ D ++LV+D  +G++     C ++
Sbjct: 1427514 LIDTPGHANFYDEAVAAMRLADGVLLVVDAVEGVRDTGRFCWLL 1427383


>supercontig_1.9 of Capsaspora owczarzaki ATCC 30864
          Length = 1380613

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 22/74 (29%), Positives = 31/74 (41%)
 Frame = -3

Query: 203    PELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALK 262
              PE +   +S  S+ T D +     +V  C     +G+  T    SGS S  +S   PAL 
Sbjct: 605882 PEDLPFYSSAASVETPDST-----TVSACTPSPAEGSANTSLASSGSASASESTAPPALA 605718

Query: 263    VVKKVKSMQMFHMP 276
                + V S     MP
Sbjct: 605717 DAQTVSSDDSMEMP 605676


  Database: C.owczarzaki/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 28,043,798
  Number of sequences in database:  89
  
Lambda     K      H
   0.321    0.137    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,358,665
Number of Sequences: 89
Number of extensions: 255515
Number of successful extensions: 1304
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 916
Number of HSP's gapped (non-prelim): 742
length of query: 596
length of database: 9,347,932
effective HSP length: 105
effective length of query: 491
effective length of database: 9,338,587
effective search space: 4585246217
effective search space used: 4585246217
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)