TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|267844904|ref|NP_058651.3| O-phosphoseryl-tRNA(Sec) selenium
transferase [Homo sapiens]
         (501 letters)

Database: A.taiwanensis/genome.fa 
           5379 sequences; 6,149,411 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJQ01001948.1| Ascogregarina taiwanensis Contig2203, whole g...   108   2e-24
gb|ABJQ01004237.1| Ascogregarina taiwanensis CLRanP168-C06.b1.ab...    56   1e-08
gb|ABJQ01003163.1| Ascogregarina taiwanensis Contig3497, whole g...    29   1.4  
gb|ABJQ01005326.1| Ascogregarina taiwanensis CLECOP5A-A10.g1.069...    26   9.4  
gb|ABJQ01000715.1| Ascogregarina taiwanensis Contig845, whole ge...    26   9.4  

>gb|ABJQ01001948.1| Ascogregarina taiwanensis Contig2203, whole genome shotgun sequence
          Length = 1135

 Score =  108 bits (269), Expect = 2e-24
 Identities = 100/334 (29%), Positives = 129/334 (38%), Gaps = 128/334 (38%)
 Frame = +2

Query: 36  LEKGKCPENGWDESTLELFLHELAIMDS-------------------------------N 64
           L + + P+  WDE ++ L L ELA MD                                N
Sbjct: 2   LHQRRVPDEPWDELSITLLLQELAGMDM*EIWRRCMG*GIWRGRADPLFRGFAY*LAHRN 181

Query: 65  NFLGNCGVGEREGRVASALVARRHYRFIHGIGR------------SGDISAVQPKAAGSS 112
           N     G GEREGR+ S LV RRH+   HGIGR            SGDI A+QPKAAGSS
Sbjct: 182 NACRVAGAGEREGRIFSPLVYRRHFGMSHGIGRLYLFYAGSSICRSGDIMALQPKAAGSS 361

Query: 113 LLNKITNSLVLDIIKLAGVH---------------------------------------- 132
           L+N ++  LVLDII+ AG+                                         
Sbjct: 362 LINILSQYLVLDIIREAGIKVSDKSMQSNSLVLVQAHKCATSQSGMLNLYGFRKLQLSDR 541

Query: 133 ----TVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITA------ 182
               + A C V+PMATGM+L  C         +   I+W RIDQKSCFK+M+ +      
Sbjct: 542 LLF*SAAGCLVLPMATGMTLHFCLSQFH----QGSDILWSRIDQKSCFKAMLLSEE*QGK 709

Query: 183 ----GFEPVVIEN----VLEGDELRTDLKAVEAK------------------------VQ 210
                   + I      +L       +  A EAK                        V 
Sbjct: 710 YRMHAARSLGISTA*LILLRSSRSEAEDNAGEAKWRCPSN*CRCYQKFVYPEPVTRMFVD 889

Query: 211 EL---GPDCILCIHSTTSCFAPRVPDRLEELAVI 241
            L   G D I C+ +TTS FAPR PD +  +A +
Sbjct: 890 ALIAGGKDNIRCVITTTSTFAPREPDDVVAVAKV 991


>gb|ABJQ01004237.1| Ascogregarina taiwanensis CLRanP168-C06.b1.ab1, whole genome
           shotgun sequence
          Length = 818

 Score = 55.8 bits (133), Expect = 1e-08
 Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
 Frame = +2

Query: 396 FTRQVSGARVVPL-GSMQTVSGYTFRGFMSHTNNYPC--AYLNAASAIGMKMQDVDLFIK 452
           F  + SGARVV   G    + GY FR F SH +NY    AYL AA A+G  ++++DLF +
Sbjct: 101 FLCRCSGARVVECNGKKSEIGGYQFRNFGSHHDNYTVTGAYLTAACAMGASVEEIDLFTE 280

Query: 453 RLDRCLKAVRKERS 466
           RL+  LK    E S
Sbjct: 281 RLEAILKEELTEAS 322


>gb|ABJQ01003163.1| Ascogregarina taiwanensis Contig3497, whole genome shotgun sequence
          Length = 4096

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -2

Query: 457  CLKAVRKERSKESDDNYDKTEDVDI 481
            CL+ VR E SK S+D++DK    D+
Sbjct: 2580 CLEQVRPESSKSSEDSHDKENRQDL 2506


>gb|ABJQ01005326.1| Ascogregarina taiwanensis CLECOP5A-A10.g1.069.ab1, whole genome
           shotgun sequence
          Length = 819

 Score = 26.2 bits (56), Expect = 9.4
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +1

Query: 220 IHSTTSCFAP---RVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQ 268
           I ST  CF     R+   +    ++CA +    +  +AYG++S  C+  ++Q
Sbjct: 397 IEST*ICF*AK*RRI*TVMPPTEIVCATFTYGSVKEHAYGLRSRGCVRRLKQ 552


>gb|ABJQ01000715.1| Ascogregarina taiwanensis Contig845, whole genome shotgun sequence
          Length = 853

 Score = 26.2 bits (56), Expect = 9.4
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -1

Query: 217 ILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKC 262
           IL I   T C A  V  R  E+ V     + PH+ +    + S++C
Sbjct: 676 ILSIR*NTMCHASTVCSRCSEVRVANLKSEAPHVSSYR*RINSARC 539


  Database: A.taiwanensis/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 6,149,411
  Number of sequences in database:  5379
  
Lambda     K      H
   0.320    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,383,458
Number of Sequences: 5379
Number of extensions: 47507
Number of successful extensions: 248
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of query: 501
length of database: 2,049,803
effective HSP length: 91
effective length of query: 410
effective length of database: 1,560,314
effective search space: 639728740
effective search space used: 639728740
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)