T-COFFEE, Version_8.99(Tue Jan 25 16:00:40 CET 2011)
Cedric Notredame
CPU TIME:7 sec.
SCORE=97
*
BAD AVG GOOD
*
gi|288565202|gb : 97
gi|288565202|gb : 97
gi|288565202|gb : 97
gi|288565202|gb : 97
gi|288565202|gb : 97
gi|288565305|gb : 97
gi|288565305|gb : 97
gi|288565305|gb : 97
gi|288565305|gb : 97
gi|288565305|gb : 97
cons : 97
gi|288565202|gb 1 -----TYDWDLVVIGGGSGGLAASKEAAKYGQK 28
gi|288565202|gb 1 -------DWDLVVIGGGSGGLAASKEAAKYGQK 26
gi|288565202|gb 1 VDDGATYDWDLVVIGGGSGGLAASKEAAKYGQK 33
gi|288565202|gb 1 ------YDWDLVVIGGGSGGLAASKEAAKYGQK 27
gi|288565202|gb 1 ----ATYDWDLVVIGGGSGGLAASKEAAKYGQK 29
gi|288565305|gb 1 ----SNFDYDFVVIGGGSGGMAAAKEAARLGAK 29
gi|288565305|gb 1 -------DYDFVVIGGGSGGMAAAKEAARLGAK 26
gi|288565305|gb 1 ------FDYDFVVIGGGSGGMAAAKEAARLGAK 27
gi|288565305|gb 1 -----NFDYDFVVIGGGSGGMAAAKEAARLGAK 28
gi|288565305|gb 1 ----SNFDYDFVVIGGGSGGMAAAKEAARLGAK 29
cons 1 *:*:*********:**:****: * * 33
gi|288565202|gb 29 VLVLDYVKPSPQGSTWGLGGTCVNVGCIPKKLM 61
gi|288565202|gb 27 VLVLDYVKPSPQGSTWGLGGTCVNVGCIPKKLM 59
gi|288565202|gb 34 VLVLDYVKPSPQGSTWGLGGTCVNVGCIPKKLM 66
gi|288565202|gb 28 VLVLDYVKPSPQGSTWGLGGTCVNVGCIPKKLM 60
gi|288565202|gb 30 VLVLDYVKPSPQGSTWGLGGTCVNVGCIPKKLM 62
gi|288565305|gb 30 VALFDFVKPTVHGTKWGLGGTCVNVGCVPKKIM 62
gi|288565305|gb 27 VALFDFVKPTVHGTKWGLGGTCVNVGCVPKKIM 59
gi|288565305|gb 28 VALFDFVKPTVHGTKWGLGGTCVNVGCVPKKIM 60
gi|288565305|gb 29 VALFDFVKPTVHGTKWGLGGTCVNVGCVPKKIM 61
gi|288565305|gb 30 VALFDFVKPTVHGTKWGLGGTCVNVGCVPKKIM 62
cons 34 * ::*:***: :*:.************:***:* 66
gi|288565202|gb 62 HQSAIMGELLHKDAEAFGWAVPNA-TFDWTKLV 93
gi|288565202|gb 60 HQSAIMGELLHKDAEAFGWAVPNA-TFDWTKLV 91
gi|288565202|gb 67 HQSAIMGELLHKDAEAFGWAVPNA-TFDWTKLV 98
gi|288565202|gb 61 HQSAIMGELLHKDAEAFGWAVPNA-TFDWTKLV 92
gi|288565202|gb 63 HQSAIMGELLHKDAEAFGWAVPNA-TFDWTKLV 94
gi|288565305|gb 63 HYSGILGAGLH-DAAHLGWQVPEKVEHNWETLV 94
gi|288565305|gb 60 HYSGILGAGLH-DAAHLGWQVPEKVEHNWETLV 91
gi|288565305|gb 61 HYSGILGAGLH-DAAHLGWQVPEKVEHNWETLV 92
gi|288565305|gb 62 HYSGILGAGLH-DAAHLGWQVPEKVEHNWETLV 93
gi|288565305|gb 63 HYSGILGAGLH-DAAHLGWQVPEKVEHNWETLV 94
cons 67 * *.*:* ** ** :** **: .:* .** 99
gi|288565202|gb 94 TSVQDYIHGLNFKYRVDLRDKKVKYENFLGTFK 126
gi|288565202|gb 92 TSVQDYIHGLNFKYRVDLRDKKVKYENFLGTFK 124
gi|288565202|gb 99 TSVQDYIHGLNFKYRVDLRDKKVKYENFLGTFK 131
gi|288565202|gb 93 TSVQDYIHGLNFKYRVDLRDKKVKYENFLGTFK 125
gi|288565202|gb 95 TSVQDYIHGLNFKYRVDLRDKKVKYENFLGTFK 127
gi|288565305|gb 95 EAVQAHVKKLNFSYRVGLRSNKVQYINALARFE 127
gi|288565305|gb 92 EAVQAHVKKLNFSYRVGLRSNKVQYINALARFE 124
gi|288565305|gb 93 EAVQAHVKKLNFSYRVGLRSNKVQYINALARFE 125
gi|288565305|gb 94 EAVQAHVKKLNFSYRVGLRSNKVQYINALARFE 126
gi|288565305|gb 95 EAVQAHVKKLNFSYRVGLRSNKVQYINALARFE 127
cons 100 :** ::: ***.***.**.:**:* * *. *: 132
gi|288565202|gb 127 DAHTLTLTNPAKGKPPKDVTFRRALIAVGGRPK 159
gi|288565202|gb 125 DAHTLTLTNPAKGKPPKDVTFRRALIAVGGRPK 157
gi|288565202|gb 132 DAHTLTLTNPAKGKPPKDVTFRRALIAVGGRPK 164
gi|288565202|gb 126 DAHTLTLTNPAKGKPPKDVTFRRALIAVGGRPK 158
gi|288565202|gb 128 DAHTLTLTNPAKGKPPKDVTFRRALIAVGGRPK 160
gi|288565305|gb 128 DPHTLSY--QVKNGPTQTLTAAHILIATGGRPT 158
gi|288565305|gb 125 DPHTLSY--QVKNGPTQTLTAAHILIATGGRPT 155
gi|288565305|gb 126 DPHTLSY--QVKNGPTQTLTAAHILIATGGRPT 156
gi|288565305|gb 127 DPHTLSY--QVKNGPTQTLTAAHILIATGGRPT 157
gi|288565305|gb 128 DPHTLSY--QVKNGPTQTLTAAHILIATGGRPT 158
cons 133 *.***: .*. *.: :* : ***.****. 165
gi|288565202|gb 160 -SLDCPG-ADLAISSDDIFSRPTPPGKTLVVGA 190
gi|288565202|gb 158 -SLDCPG-ADLAISSDDIFSRPTPPGKTLVVGA 188
gi|288565202|gb 165 -SLDCPG-ADLAISSDDIFSRPTPPGKTLVVGA 195
gi|288565202|gb 159 -SLDCPG-ADLAISSDDIFSRPTPPGKTLVVGA 189
gi|288565202|gb 161 -SLDCPG-ADLAISSDDIFSRPTPPGKTLVVGA 191
gi|288565305|gb 159 VPKDIPGVAEYAITSDDLFSLSTAPGKTLVVGG 191
gi|288565305|gb 156 VPKDIPGVAEYAITSDDLFSLSTAPGKTLVVGG 188
gi|288565305|gb 157 VPKDIPGVAEYAITSDDLFSLSTAPGKTLVVGG 189
gi|288565305|gb 158 VPKDIPGVAEYAITSDDLFSLSTAPGKTLVVGG 190
gi|288565305|gb 159 VPKDIPGVAEYAITSDDLFSLSTAPGKTLVVGG 191
cons 166 . * ** *: **:***:** .*.********. 198
gi|288565202|gb 191 SYVALECAGFLKAQGFDVTVMVRSILLRGFDTD 223
gi|288565202|gb 189 SYVALECAGFLKAQGFDVTVMVRSILLRGFDTD 221
gi|288565202|gb 196 SYVALECAGFLKAQGFDVTVMVRSILLRGFDTD 228
gi|288565202|gb 190 SYVALECAGFLKAQGFDVTVMVRSILLRGFDTD 222
gi|288565202|gb 192 SYVALECAGFLKAQGFDVTVMVRSILLRGFDTD 224
gi|288565305|gb 192 SYIALECAGFLNELHYPTTVAVRSILLRGFDRQ 224
gi|288565305|gb 189 SYIALECAGFLNELHYPTTVAVRSILLRGFDRQ 221
gi|288565305|gb 190 SYIALECAGFLNELHYPTTVAVRSILLRGFDRQ 222
gi|288565305|gb 191 SYIALECAGFLNELHYPTTVAVRSILLRGFDRQ 223
gi|288565305|gb 192 SYIALECAGFLNELHYPTTVAVRSILLRGFDRQ 224
cons 199 **:********: : .** ********** : 231
gi|288565202|gb 224 MAARIGTYMEEEAKIDFIKGAVPTSIE-QLANG 255
gi|288565202|gb 222 MAARIGTYMEEEAKIDFIKGAVPTSIE-QLANG 253
gi|288565202|gb 229 MAARIGTYMEEEAKIDFIKGAVPTSIE-QLANG 260
gi|288565202|gb 223 MAARIGTYMEEEAKIDFIKGAVPTSIE-QLANG 254
gi|288565202|gb 225 MAARIGTYMEEEAKIDFIKGAVPTSIE-QLANG 256
gi|288565305|gb 225 VAAKIQDIMVAQ-GMDFRFNTLPTSIVKDEATG 256
gi|288565305|gb 222 VAAKIQDIMVAQ-GMDFRFNTLPTSIVKDEATG 253
gi|288565305|gb 223 VAAKIQDIMVAQ-GMDFRFNTLPTSIVKDEATG 254
gi|288565305|gb 224 VAAKIQDIMVAQ-GMDFRFNTLPTSIVKDEATG 255
gi|288565305|gb 225 VAAKIQDIMVAQ-GMDFRFNTLPTSIVKDEATG 256
cons 232 :**:* * : :** .::**** : *.* 264
gi|288565202|gb 256 E----------------GIYDTVLNATGRNPDV 272
gi|288565202|gb 254 QLKVT------------GIYDTVLNATGRNPDV 274
gi|288565202|gb 261 E----------------GIYDTVLNATGRNPDV 277
gi|288565202|gb 255 QLKVTH-------TFGEGIYDTVLNATGRNPDV 280
gi|288565202|gb 257 QLKVT---------------------------- 261
gi|288565305|gb 257 QLHVSFANSETHETFTE-AFDTVLYAVGRTADT 288
gi|288565305|gb 254 QLHVSFANSETHETFTE-AFDTVLYAVGRTADT 285
gi|288565305|gb 255 QLHVSFANSETHETFTE-AFDTVLYAVGRTADT 286
gi|288565305|gb 256 QLHVSFANSETHETFTE-AFDTVLYAVGRTADT 287
gi|288565305|gb 257 QLHVSFANSETHETFTE-AFDTVLYAVGRTADT 288
cons 265 : 297
gi|288565202|gb 273 SGLNLPAAGVGLNPKTGRIAVTHEQTSAPHIYA 305
gi|288565202|gb 275 SGLNLPAAGVGLNPKTGRIAVTHEQTSAPHIYA 307
gi|288565202|gb 278 SGLNLPAAGVGLNPKTGRIAVTHEQTSAPHIYA 310
gi|288565202|gb 281 SGLNLPAAGVGLNPKTGRIAVTHEQTSAPHIYA 313
gi|288565202|gb 262 --------------------------------- 261
gi|288565305|gb 289 FNIGLEKAGVKALP-NGKFETVNEATNVPHIHA 320
gi|288565305|gb 286 FNIGLEKAGVKALP-NGKFETVNEATNVPHIHA 317
gi|288565305|gb 287 FNIGLEKAGVKALP-NGKFETVNEATNVPHIHA 318
gi|288565305|gb 288 FNIGLEKAGVKALP-NGKFETVNEATNVPHIHA 319
gi|288565305|gb 289 FNIGLEKAGVKALP-NGKFETVNEATNVPHIHA 320
cons 298 330
gi|288565202|gb 306 VGDVIDG-PELTPVAIQAGRLLAKRLFD-NSAT 336
gi|288565202|gb 308 VGDVIDG-PELTPVAIQAGRLLAKRLFD-NSAT 338
gi|288565202|gb 311 VGDVIDG-PELTPVAIQAGRLLAKRLFD-NSAT 341
gi|288565202|gb 314 VGDVIDG-PELTPVAIQAGRLLAKRLFD-NSAT 344
gi|288565202|gb 262 --------------------------------- 261
gi|288565305|gb 321 VGDVLQGKPELTPVAIRAGEHLVRRLFKPNYTK 353
gi|288565305|gb 318 VGDVLQGKPELTPVAIRAGEHLVRRLFKPNYTK 350
gi|288565305|gb 319 VGDVLQGKPELTPVAIRAGEHLVRRLFKPNYTK 351
gi|288565305|gb 320 VGDVLQGKPELTPVAIRAGEHLVRRLFKPNYTK 352
gi|288565305|gb 321 VGDVLQGKPELTPVAIRAGEHLVRRLFKPNYTK 353
cons 331 363
gi|288565202|gb 337 LMAYDKVCTAVFTPIEYGCCGLSEDAAIETIGA 369
gi|288565202|gb 339 LMAYDKVCTAVFTPIEYGCCGLSEDAAIETIGA 371
gi|288565202|gb 342 LMAYDKVCTAVFTPIEYGCCGLSEDAAIETIGA 374
gi|288565202|gb 345 LMAYDKVCTAVFTPIEYGCCGLSEDAAIETIGA 377
gi|288565202|gb 262 --------------------------------- 261
gi|288565305|gb 354 TMNYDLIPTTVFTPVEYGTIGLSEEEAITRYGK 386
gi|288565305|gb 351 TMNYDLIPTTVFTPVEYGTIGLSEEEAITRYGK 383
gi|288565305|gb 352 TMNYDLIPTTVFTPVEYGTIGLSEEEAITRYGK 384
gi|288565305|gb 353 TMNYDLIPTTVFTPVEYGTIGLSEEEAITRYGK 385
gi|288565305|gb 354 TMNYDLIPTTVFTPVEYGTIGLSEEEAITRYGK 386
cons 364 396
gi|288565202|gb 370 DNLGVYHQSFTPLEWSLSHDRA-LAKECYCKLI 401
gi|288565202|gb 372 DNLGVYHQSFTPLEWSLSHDRA-LAKECYCKLI 403
gi|288565202|gb 375 DNLGVYHQSFTPLEWSLSHDRA-LAKECYCKLI 406
gi|288565202|gb 378 DNLGVYHQSFTPLEWSLSHDRA-LAKECYCKLI 409
gi|288565202|gb 262 --------------------------------- 261
gi|288565305|gb 387 DDIVVYPWEFQTLEWGAVHRKK---ADCLSKLV 416
gi|288565305|gb 384 DDIVVYPWEFQTLEWGAVHRKK---ADCLSKLV 413
gi|288565305|gb 385 DDIVVYPWEFQTLEWGAVHRKK---ADCLSKLV 414
gi|288565305|gb 386 DDIVVYPWEFQTLEWGAVHRKKAESAQCLSKLV 418
gi|288565305|gb 387 DDIVVYPWEFQTLEWGAVHRKKAESAQCLSKLV 419
cons 397 429
gi|288565202|gb 402 VDRTQNDRVVGFHYLGPNAGEVTQAVGIAMKLN 434
gi|288565202|gb 404 VDRTQNDRVVGFHYLGPNAGEVTQAVGIAMKLN 436
gi|288565202|gb 407 VDRTQNDRVVGFHYLGPNAGEVTQAVGIAMKLN 439
gi|288565202|gb 410 VDRTQNDRVVGFHYLGPNAGEVTQAVGIAMKLN 442
gi|288565202|gb 262 --------------------------------- 261
gi|288565305|gb 417 CQKSANEKVLGFHFVGPNAGEVTQGFAVAVTMG 449
gi|288565305|gb 414 CQKSANEKVLGFHFVGPNAGEVTQGFAVAVTMG 446
gi|288565305|gb 415 CQKSANEKVLGFHFVGPNAGEVTQGFAVAVTMG 447
gi|288565305|gb 419 CQKSANEKVLGFHFVGPNAGEVTQGFAVAVTMG 451
gi|288565305|gb 420 CQKSANEKVLGFHFVGPNAGEVTQGFAVAVTMG 452
cons 430 462
gi|288565202|gb 435 ASYDDFVSTVGIHPTTAEIFTTLEITKESGLDA 467
gi|288565202|gb 437 ASYDDFVSTVGIHPTTAEIFTTLEITKESGLDA 469
gi|288565202|gb 440 ASYDDFVSTVGIHPTTAEIFTTLEITKESGLDA 472
gi|288565202|gb 443 ASYDDFVSTVGIHPTTAEIFTTLEITKESGLDA 475
gi|288565202|gb 262 --------------------------------- 261
gi|288565305|gb 450 ATKEDFDNVIGIHPTDAESFMALTVTKESGASW 482
gi|288565305|gb 447 ATKEDFDNVIGIHPTDAESFMALTVTKESGASW 479
gi|288565305|gb 448 ATKEDFDNVIGIHPTDAESFMALTVTKESGASW 480
gi|288565305|gb 452 ATKEDFDNVIGIHPTDAESFMALTVTKESGASW 484
gi|288565305|gb 453 ATKEDFDNVIGIHPTDAESFMALTVTKESGASW 485
cons 463 495
gi|288565202|gb 468 SAAGC-XG 474
gi|288565202|gb 470 SAAGC-XG 476
gi|288565202|gb 473 SAAGC-XG 479
gi|288565202|gb 476 SAAGC-XG 482
gi|288565202|gb 262 -HTFG-EG 267
gi|288565305|gb 483 VATGG-CG 489
gi|288565305|gb 480 VATGG-CG 486
gi|288565305|gb 481 VATGG-CG 487
gi|288565305|gb 485 VATGGCGG 492
gi|288565305|gb 486 VATGGCGG 493
cons 496 : * 503