T-COFFEE, Version_8.99(Thu Feb 17 19:24:49 CET 2011 - Revision 594)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=91
*
 BAD AVG GOOD
*
sbp2           :  90
sbp2uniotRNA   :  92
B.hom          :  67
C.mur          :  93
C.par          :  93
N.gru          :  92
P.pal          :  93
P.tri          :  91
P.ult          :  91
S.par          :  93
T.tra          :  92
cons           :  91

sbp2               1 MASEGPREPESEGIKLSADVKPFVPRFAGLNVAWLE   36 
sbp2uniotRNA       1 ------------------------------------    0 
B.hom              1 ------------------------------------    0 
C.mur              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
P.ult              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons               1                                        36 


sbp2              37 SSEACVFPSSAATYYPFVQEPPVTEQKIYTEDMAFG   72 
sbp2uniotRNA       1 ------------------------------------    0 
B.hom              1 ------------------------------------    0 
C.mur              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
P.ult              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons              37                                        72 


sbp2              73 ASTFPPQYLSSEITLHPYAYSPYTLDSTQNVYSVPG  108 
sbp2uniotRNA       1 ------------------------------------    0 
B.hom              1 ------------------------------------    0 
C.mur              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
P.ult              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons              73                                       108 


sbp2             109 SQYLYNQPSCYRGFQTVKHRNENTCPLPQEMKALFK  144 
sbp2uniotRNA       1 ------------------------------------    0 
B.hom              1 ------------------------------------    0 
C.mur              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
P.ult              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             109                                       144 


sbp2             145 KKTYDEKKTYDQQKFDSERADGTISSEIKSARGSHH  180 
sbp2uniotRNA       1 ------------------------------------    0 
B.hom              1 ------------------------------------    0 
C.mur              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
P.ult              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             145                                       180 


sbp2             181 LSIYAENSLKSDGYHKRTDRKSRIIAKNVSTSKPEF  216 
sbp2uniotRNA       1 ------------------------------------    0 
B.hom              1 ------------------------------------    0 
C.mur              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
P.ult              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             181                                       216 


sbp2             217 EFTTLDFPELQGAENNMSEIQKQPKWGPVHSVSTDI  252 
sbp2uniotRNA       1 ------------------------------------    0 
B.hom              1 ------------------------------------    0 
C.mur              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
P.ult              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             217                                       252 


sbp2             253 SLLREVVKPAAVLSKGEIVVKNNPNESVTANAATNS  288 
sbp2uniotRNA       1 ------------------------------------    0 
B.hom              1 ------------------------------------    0 
C.mur              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
P.ult              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             253                                       288 


sbp2             289 PSCTRELSWTPMGYVVRQTLSTELSAAPKNVTSMIN  324 
sbp2uniotRNA       1 ------------------------------------    0 
B.hom              1 ------------------------------------    0 
C.mur              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
P.ult              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             289                                       324 


sbp2             325 LKTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHP  360 
sbp2uniotRNA       1 ------------------------------------    0 
B.hom              1 ------------------------------------    0 
C.mur              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
P.ult              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             325                                       360 


sbp2             361 TQKSKASQGSDLEQNEASRKNKKKKEKSTSKYEVLT  396 
sbp2uniotRNA       1 ------------------------------------    0 
B.hom              1 ------------------------------------    0 
C.mur              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
P.ult              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             361                                       396 


sbp2             397 VQEPPRIEDAEEFPNLAVASERRDRIETPKFQSKQQ  432 
sbp2uniotRNA       1 ------------------------------------    0 
B.hom              1 ------------------------------------    0 
C.mur              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
P.ult              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             397                                       432 


sbp2             433 PQDNFKNNVKKSQLPVQLDLGGMLTALEKKQHSQHA  468 
sbp2uniotRNA       1 ------------------------------------    0 
B.hom              1 ------------------------------------    0 
C.mur              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
P.ult              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             433                                       468 


sbp2             469 KQSSKPVVVSVGAVPVLSKECASGERGRRMSQMKTP  504 
sbp2uniotRNA       1 ------------------------------------    0 
B.hom              1 ------------------------------------    0 
C.mur              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
P.ult              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             469                                       504 


sbp2             505 HNPLDSSAPLMKKGKQREIPKAKKPTSLKKIILKER  540 
sbp2uniotRNA       1 ------------------------------------    0 
B.hom              1 ------------------------------------    0 
C.mur              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
P.ult              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             505                                       540 


sbp2             541 QERKQRLQENAVSPAFTSDDTQDGESGGDDQFPEQA  576 
sbp2uniotRNA       1 ------------------------------------    0 
B.hom              1 ------------------------------------    0 
C.mur              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
P.ult              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             541                                       576 


sbp2             577 ELSGPEGMDELISTPSVEDKSEEPPGTELQRDTEAS  612 
sbp2uniotRNA       1 ------------------------------------    0 
B.hom              1 ------------------------------------    0 
C.mur              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
P.ult              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             577                                       612 


sbp2             613 HLAPNHTTFPKIHSRRFRDYCSQMLSKEVDACVTDL  648 
sbp2uniotRNA       1 ------------------------------------    0 
B.hom              1 -----------------QKRGKE-------------    6 
C.mur              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 --------------RKIREYVNYPLDPDYENIIFQM   22 
P.pal              1 -----------------QEYMNQVCTKEIDDTAREF   19 
P.tri              1 -----------------RPYATLISDESVKPLLTEM   19 
P.ult              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 -----------------REYVDQLVPPELNRLIPPM   19 

cons             613                                       648 


sbp2             649 LKELVRFQDRMYQKDPVKAKTKRRLVLGLREVLKHL  684 
sbp2uniotRNA       1 --------DRMYQKDPVKAKTKRRLVLGLREVLKHL   28 
B.hom              7 ----AG-------------------TKKKAEEEKTK   19 
C.mur              1 ----------------------RVFTVGVREAMRCL   14 
C.par              1 ----------------------RVFTVGVREAMRCL   14 
N.gru             23 LTKLQFYQFRLKKTDKKKFKQRLRYVIGIREVLKGL   58 
P.pal             20 IVKIKQFQDNYALKNPD--KPKKRFITGLREIERAA   53 
P.tri             20 FGELMRLQKRAVDENN--TKVKRRLVMGLREVARGI   53 
P.ult              1 ------LQERAHHQNSLQDKRSRRLVLGLHEVKRGV   30 
S.par              1 --------------NPLKAKKTRRLVFGLREVKRGL   22 
T.tra             20 LKELSRLQERARVLNPTKA--KRRLVTGLREVVKFV   53 

cons             649                               *  :    684 


sbp2             685 KLKKLKCVIISPNCEKIQSKGGLDDTLHTIIDYACE  720 
sbp2uniotRNA      29 KLKKLKCVIISPNCEKIQSKGGLDDTLHTIIDYACE   64 
B.hom             20 KRKREEAMVLESDSEESSEEMEEEEEEEEEKAAAEE   55 
C.mur             15 RHKKLQALIVAPDIEGGDIEGGLRHHVIHILMQAQE   50 
C.par             15 RHKKLKALIVAPDIEGDGVEGSLRHHVIHILLQAQE   50 
N.gru             59 KLKHIRAVVIAPNIDKVTTPGGLDTKIEEIIQKCNE   94 
P.pal             54 DCGKLSAVIIAPNIEDINCPGGLNESIKSIIRLCRS   89 
P.tri             54 RSHKVKLVAMANNLDD---YGAIDEKLQEILDLADE   86 
P.ult             31 LAKKICLLIVGTDIEQCD---VLDEKLDEILAIATK   63 
S.par             23 KNLKVMCLLVAYDVDECAAEGGLDDKIVELIDLARA   58 
T.tra             54 KVGTAKAVIVAPDIEKVEADGGLDDKIAFIRTRAAE   89 

cons             685        : :  : :                  .    720 


sbp2             721 QNIPFVFALNRKALGRSLNKAVPVSVVGIFSYDGAQ  756 
sbp2uniotRNA      65 QNIPFVFALNRKALGRSLNKAVPVSVVGIFSYDGAQ  100 
B.hom             56 EELDRSETSKEKKERNTMNETAKK------------   79 
C.mur             51 FNIPVIFALNRHRIGRAMGKHMRMSVLGLLSTRGVE   86 
C.par             51 LNIPTIFALNRHRIGRAMGKHMRMSVLGLLSIRGVE   86 
N.gru             95 QELPVFFALTKKKLGTAMKTSTKISLVGLYSMDGAF  130 
P.pal             90 KQLLYTFALSRRIIGRLINVHIKVSAFGILFHDGAE  125 
P.tri             87 NEVPIFYEFTKRALGKVMGKTVKIAVVGVQNAEGAH  122 
P.ult             64 QEVPIIYPMSRRKLGRVLSKSVRVSCVGVYSMEGAN   99 
S.par             59 NKIPVVFALSKRKLGKAVLKTIRVSCVGIYSVDGAN   94 
T.tra             90 LGIPLVYALSRNRLGRAMGRKLKISVAAILFYDGVN  125 

cons             721   :      ...     :                    756 


sbp2             757 DQFHKMVELTVAARQAYKTMLENVQQELVGEPRPQA  792 
sbp2uniotRNA     101 ------------------------------------  100 
B.hom             80 ------------------------------------   79 
C.mur             87 RQFQTVAHTAKVLQRLYNF-----------------  105 
C.par             87 KQFQAISHTAQLLRKLYHF-----------------  105 
N.gru            131 DEFKKAK-----------------------------  137 
P.pal            126 DIYNRLSKLTLASRDTFRKQQ---------------  146 
P.tri            123 QQFKKLLAI---------------------------  131 
P.ult            100 DLFQDI------------------------------  105 
S.par             95 DMWASVQKTV--------------------------  104 
T.tra            126 TEFNRMVELADEGRAAF-------------------  142 

cons             757                                       792 


sbp2             793 PPSLPTQGPSCPAEDGPPALKEKEEPHYIEIWKKHL  828 
sbp2uniotRNA     101 ------------------------------------  100 
B.hom             80 ------------------------------------   79 
C.mur            106 ------------------------------------  105 
C.par            106 ------------------------------------  105 
N.gru            138 ------------------------------------  137 
P.pal            147 ------------------------------------  146 
P.tri            132 ------------------------------------  131 
P.ult            106 ------------------------------------  105 
S.par            105 ------------------------------------  104 
T.tra            143 ------------------------------------  142 

cons             793                                       828 


sbp2             829 EAYSGCTLELEESLEASTSQMMNLNL  854 
sbp2uniotRNA     101 -------------------------D  101 
B.hom             80 ---------------------EMPSQ   84 
C.mur            106 ----------------------CIEH  109 
C.par            106 ----------------------CIEN  109 
N.gru            138 ------------------------QI  139 
P.pal            147 ---------------------QQVQQ  151 
P.tri            132 ----------------------STKA  135 
P.ult            106 ------------------------LK  107 
S.par            105 ----------------------ASLQ  108 
T.tra            143 ----------------------DAAL  146 

cons             829                             854