T-COFFEE, Version_8.99(Thu Feb 17 19:24:49 CET 2011 - Revision 594)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=95
*
 BAD AVG GOOD
*
sbp2           :  94
sbp2uniotRNA   :  96
C.muris        :  97
C.owc          :  94
C.par          :  97
N.gru          :  95
P.pal          :  94
P.tri          :  93
S.par          :  95
T.tra          :  95
cons           :  95

sbp2               1 MASEGPREPESEGIKLSADVKPFVPRFAGLNVAWLE   36 
sbp2uniotRNA       1 ------------------------------------    0 
C.muris            1 ------------------------------------    0 
C.owc              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons               1                                        36 


sbp2              37 SSEACVFPSSAATYYPFVQEPPVTEQKIYTEDMAFG   72 
sbp2uniotRNA       1 ------------------------------------    0 
C.muris            1 ------------------------------------    0 
C.owc              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons              37                                        72 


sbp2              73 ASTFPPQYLSSEITLHPYAYSPYTLDSTQNVYSVPG  108 
sbp2uniotRNA       1 ------------------------------------    0 
C.muris            1 ------------------------------------    0 
C.owc              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons              73                                       108 


sbp2             109 SQYLYNQPSCYRGFQTVKHRNENTCPLPQEMKALFK  144 
sbp2uniotRNA       1 ------------------------------------    0 
C.muris            1 ------------------------------------    0 
C.owc              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             109                                       144 


sbp2             145 KKTYDEKKTYDQQKFDSERADGTISSEIKSARGSHH  180 
sbp2uniotRNA       1 ------------------------------------    0 
C.muris            1 ------------------------------------    0 
C.owc              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             145                                       180 


sbp2             181 LSIYAENSLKSDGYHKRTDRKSRIIAKNVSTSKPEF  216 
sbp2uniotRNA       1 ------------------------------------    0 
C.muris            1 ------------------------------------    0 
C.owc              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             181                                       216 


sbp2             217 EFTTLDFPELQGAENNMSEIQKQPKWGPVHSVSTDI  252 
sbp2uniotRNA       1 ------------------------------------    0 
C.muris            1 ------------------------------------    0 
C.owc              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             217                                       252 


sbp2             253 SLLREVVKPAAVLSKGEIVVKNNPNESVTANAATNS  288 
sbp2uniotRNA       1 ------------------------------------    0 
C.muris            1 ------------------------------------    0 
C.owc              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             253                                       288 


sbp2             289 PSCTRELSWTPMGYVVRQTLSTELSAAPKNVTSMIN  324 
sbp2uniotRNA       1 ------------------------------------    0 
C.muris            1 ------------------------------------    0 
C.owc              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             289                                       324 


sbp2             325 LKTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHP  360 
sbp2uniotRNA       1 ------------------------------------    0 
C.muris            1 ------------------------------------    0 
C.owc              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             325                                       360 


sbp2             361 TQKSKASQGSDLEQNEASRKNKKKKEKSTSKYEVLT  396 
sbp2uniotRNA       1 ------------------------------------    0 
C.muris            1 ------------------------------------    0 
C.owc              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             361                                       396 


sbp2             397 VQEPPRIEDAEEFPNLAVASERRDRIETPKFQSKQQ  432 
sbp2uniotRNA       1 ------------------------------------    0 
C.muris            1 ------------------------------------    0 
C.owc              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             397                                       432 


sbp2             433 PQDNFKNNVKKSQLPVQLDLGGMLTALEKKQHSQHA  468 
sbp2uniotRNA       1 ------------------------------------    0 
C.muris            1 ------------------------------------    0 
C.owc              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             433                                       468 


sbp2             469 KQSSKPVVVSVGAVPVLSKECASGERGRRMSQMKTP  504 
sbp2uniotRNA       1 ------------------------------------    0 
C.muris            1 ------------------------------------    0 
C.owc              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             469                                       504 


sbp2             505 HNPLDSSAPLMKKGKQREIPKAKKPTSLKKIILKER  540 
sbp2uniotRNA       1 ------------------------------------    0 
C.muris            1 ------------------------------------    0 
C.owc              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             505                                       540 


sbp2             541 QERKQRLQENAVSPAFTSDDTQDGESGGDDQFPEQA  576 
sbp2uniotRNA       1 ------------------------------------    0 
C.muris            1 ------------------------------------    0 
C.owc              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             541                                       576 


sbp2             577 ELSGPEGMDELISTPSVEDKSEEPPGTELQRDTEAS  612 
sbp2uniotRNA       1 ------------------------------------    0 
C.muris            1 ------------------------------------    0 
C.owc              1 ------------------------------------    0 
C.par              1 ------------------------------------    0 
N.gru              1 ------------------------------------    0 
P.pal              1 ------------------------------------    0 
P.tri              1 ------------------------------------    0 
S.par              1 ------------------------------------    0 
T.tra              1 ------------------------------------    0 

cons             577                                       612 


sbp2             613 HLAPNHTTFPKIHSRRFRDYCSQMLSKEVDACVTDL  648 
sbp2uniotRNA       1 ------------------------------------    0 
C.muris            1 ------------------------------------    0 
C.owc              1 -------------------YCSQKVGAELDSATAIV   17 
C.par              1 ------------------------------------    0 
N.gru              1 ------------NERKIREYVNYPLDPDYENIIFQM   24 
P.pal              1 -----------------QEYMNQVCTKEIDDTAREF   19 
P.tri              1 -----------------RPYATLISDESVKPLLTEM   19 
S.par              1 ------------------------------------    0 
T.tra              1 -----------------REYVDQLVPPELNRLIPPM   19 

cons             613                                       648 


sbp2             649 LKELVRFQD-RMYQKDPVKAKTKRRLVLGLREVLKH  683 
sbp2uniotRNA       1 --------D-RMYQKDPVKAKTKRRLVLGLREVLKH   27 
C.muris            1 -----------------------RVFTVGVREAMRC   13 
C.owc             18 LKQLHKFQERRLATIDPNKAKQRRWFVVGLKEVFKH   53 
C.par              1 -----------------------RVFTVGVREAMRC   13 
N.gru             25 LTKLQFYQF-RLKKTDKKKFKQRLRYVIGIREVLKG   59 
P.pal             20 IVKIKQFQD-NYALKNPDKP--KKRFITGLREIERA   52 
P.tri             20 FGELMRLQK-RAV--DENNTKVKRRLVMGLREVARG   52 
S.par              1 --------E-RARLTNPLKAKKTRRLVFGLREVKRG   27 
T.tra             20 LKELSRLQE-RARVLNPTKAK--RRLVTGLREVVKF   52 

cons             649                             *::*  :   684 


sbp2             684 LKLKKLKCVIISPNCEKIQSKGGLDDTLHTIIDYAC  719 
sbp2uniotRNA      28 LKLKKLKCVIISPNCEKIQSKGGLDDTLHTIIDYAC   63 
C.muris           14 LRHKKLQALIVAPDIEGGDIEGGLRHHVIHILMQAQ   49 
C.owc             54 LQRGKLRCLIVAPDIESVRSAGGLDDAISSILTEAH   89 
C.par             14 LRHKKLKALIVAPDIEGDGVEGSLRHHVIHILLQAQ   49 
N.gru             60 LKLKHIRAVVIAPNIDKVTTPGGLDTKIEEIIQKCN   95 
P.pal             53 ADCGKLSAVIIAPNIEDINCPGGLNESIKSIIRLCR   88 
P.tri             53 IRSHKVKLVAMANNLDD---YGAIDEKLQEILDLAD   85 
S.par             28 LKNLKVMCLLVAYDVDECAAEGGLDDKIVELIDLAR   63 
T.tra             53 VKVGTAKAVIVAPDIEKVEADGGLDDKIAFIRTRAA   88 

cons             685         : :: : :     *.:   :  :   .   720 


sbp2             720 EQNIPFVFALNRKALGRSLNKAVPVSVVGIFSYDGA  755 
sbp2uniotRNA      64 EQNIPFVFALNRKALGRSLNKAVPVSVVGIFSYDGA   99 
C.muris           50 EFNIPVIFALNRHRIGRAMGKHMRMSVLGLLSTRGV   85 
C.owc             90 AQDRPVVFALNRRKIARALNIHVPVSAVGIFTFDGL  125 
C.par             50 ELNIPTIFALNRHRIGRAMGKHMRMSVLGLLSIRGV   85 
N.gru             96 EQELPVFFALTKKKLGTAMKTSTKISLVGLYSMDGA  131 
P.pal             89 SKQLLYTFALSRRIIGRLINVHIKVSAFGILFHDGA  124 
P.tri             86 ENEVPIFYEFTKRALGKVMGKTVKIAVVGVQNAEGA  121 
S.par             64 ANKIPVVFALSKYDIGRATN----------------   83 
T.tra             89 ELGIPLVYALSRNRLGRAMGRKLKISVAAILFYDGV  124 

cons             721        : :.:  :.                      756 


sbp2             756 QDQFHKMVELTVAARQAYKTMLENVQQELVGEPRPQ  791 
sbp2uniotRNA     100 Q-----------------------------------  100 
C.muris           86 ERQFQTVAHTAKVLQRLYNFC---------------  106 
C.owc            126 HQEYKSMLLQSTEGRLAYFAMLEATHAQWVETPP--  159 
C.par             86 EKQFQAISHTAQLLRKLYHFC---------------  106 
N.gru            132 FDEFKKAK----------------------------  139 
P.pal            125 EDIYNRLSKLTLASRDTFRKQQQQ------------  148 
P.tri            122 HQQFKKLLAIS-------------------------  132 
S.par             84 ------------------------------------   83 
T.tra            125 NTEFNRMVELADEGRAAFD-----------------  143 

cons             757                                       792 


sbp2             792 APPSLPTQGPSCPAEDGPPALKEKEEPHYIEIWKKH  827 
sbp2uniotRNA     101 ------------------------------------  100 
C.muris          107 ------------------------------------  106 
C.owc            160 ------------------------------------  159 
C.par            107 ------------------------------------  106 
N.gru            140 ------------------------------------  139 
P.pal            149 ------------------------------------  148 
P.tri            133 ------------------------------------  132 
S.par             84 ------------------------------------   83 
T.tra            144 ------------------------------------  143 

cons             793                                       828 


sbp2             828 LEAYSGCTLELEESLEASTSQMMNLNL  854 
sbp2uniotRNA     101 --------------------------D  101 
C.muris          107 ------------------------IEH  109 
C.owc            160 ------------------------PTA  162 
C.par            107 ------------------------IEN  109 
N.gru            140 -------------------------QI  141 
P.pal            149 ------------------------VQQ  151 
P.tri            133 ------------------------TKA  135 
S.par             84 --------------------------Q   84 
T.tra            144 ------------------------AAL  146 

cons             829                              855