T-COFFEE, Version_8.99(Thu Feb 17 19:24:49 CET 2011 - Revision 594)
Cedric Notredame
CPU TIME:5 sec.
SCORE=93
*
BAD AVG GOOD
*
eEFSec : 93
eEFSec_GTP_ : 93
eEFSec_DomII_ : 97
B.hom : 94
C.mer : 96
C.owc : 92
E.sil : 93
H.ara : 90
N.gru : 93
P.pal : 95
P.tri : 93
P.ult : 91
S.par : 93
T.tra : 93
cons : 93
eEFSec 1 MAGRRVNVNVGVLGHIDSGKTALARALSTTASTAAF 36
eEFSec_GTP_ 1 ------------LGHIDSGKTALARALSTTASTAAF 24
eEFSec_DomII_ 1 ------------------------------------ 0
B.hom 1 ------NINVGVMGHVDSGKTSLVKSLSAILSTASL 30
C.mer 1 ---RFLNINVAVMGHVDVGKTTLVRFLSEILSTAAL 33
C.owc 1 ---RVLNVNLGVLGHIDSGKTALAKALSTVASTAAF 33
E.sil 1 -----LNINVGILGHVDSGKTSLVKALSTVLSTASL 31
H.ara 1 -----VNVNVGVLGHVDSGKTSLVRALSTHLSTAAL 31
N.gru 1 ---RILNVNVGILGHVDSGKTSLCKALSTHASTAAF 33
P.pal 1 ---KPLNINIGIMGHVDSGKTSLAKALSTSLSTAAL 33
P.tri 1 -----LNVNLGVLGHVDSGKTSLVKALSTLLSTAAL 31
P.ult 1 -----VNVNVGVLGHVDSGKTSLVRVLSTQLSTAAL 31
S.par 1 -----VNVNVGILGHVDSGKTSLVRSLSTHLSTAAL 31
T.tra 1 A-SRVLNVNVGLLGHVDSGKTSLAKALSTLASTAAF 35
cons 1 36
eEFSec 37 DKQPQSRERGITLDLGFSCFSV-PLPARLRSSLPEF 71
eEFSec_GTP_ 25 DKQPQSRERGITLDLGFSCFSV-PLPARLRSSLPEF 59
eEFSec_DomII_ 1 ------------------------------------ 0
B.hom 31 DKNPQSRQRGITLDLGFSAFLS-DIPSHIS------ 59
C.mer 34 DKHPASRELGRTIDLGFSCTRL-PASPVVVQLVDDE 68
C.owc 34 DKNPQSQARGITLDLGFSSLSVTPMPEH-------- 61
E.sil 32 DKNPQSRERGITLDLGFSAFTV-SLPEHLPHLTGHE 66
H.ara 32 DKSPQSQRRGITLDLGFSSFRL-DIGPS-------- 58
N.gru 34 DKSPQSKERGITQDLGFSAF---------------- 53
P.pal 34 DKSPASQERGITLDLGFSAFHS-ELPDRLK------ 62
P.tri 32 DKSKQSRQRGMTLDLGFSCFFL-DMPSHLQASYP-- 64
P.ult 32 DKHPQSQQRGITLDLGFSAFRV-P------------ 54
S.par 32 DKNPQSKARGITLDLGFSSLQL-PFT---------- 56
T.tra 36 DKHPQSQVRGITLDLGFSALRV-PLPPA-------- 62
cons 37 72
eEFSec 72 QAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGA 107
eEFSec_GTP_ 60 QAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGA 95
eEFSec_DomII_ 1 ------------------------------------ 0
B.hom 60 -------------SIQYTLVDCPGHASLIRTILGGA 82
C.mer 69 AASLE---NVSYEGLQLTWIDCPGHASLLRTVLLGA 101
C.owc 62 -------------LLQFTLVDCPGHADLIRTIIGGA 84
E.sil 67 VFAPPSTAAAFTRTLPTRQVDCPGHASLIRTIIGGA 102
H.ara 59 -------------FLQVTLVDCPGHTSLFQTVLGGA 81
N.gru 54 --------------IQYTLVDCPGHASLIRTIIGGA 75
P.pal 63 -------------SIQYTLVDCPGHASLIKTIIGGS 85
P.tri 65 --------DPDKKNLQITLVDCPGHASLIRTIIGGA 92
P.ult 55 --------------IQITLVDCPGHASLFKTILGGA 76
S.par 57 --------------AQLTLVDCPGHASLIKTVIGGA 78
T.tra 63 -------------LIQFTLVDCPGHASLIKTIIGGA 85
cons 73 108
eEFSec 108 QIIDLMMLVIDVTKGMQTQSAECLVIGQIAC---QK 140
eEFSec_GTP_ 96 QIIDLMMLVIDVTKGMQTQSAECLVIGQIAC---QK 128
eEFSec_DomII_ 1 ------------------------------------ 0
B.hom 83 QIIDMLIIVIDCLKGIQAQTAECIVIGEITT---NK 115
C.mer 102 SVMDLLLLVVDASAGIQAQTLECLALAAIFT---KH 134
C.owc 85 QIIDMMMLVVDVNKGIQTQTAECLVIGEIMC---DI 117
E.sil 103 QIMDMMLLVVDATKGIQAQTTECVVIGEAVMSSGAD 138
H.ara 82 AIIDTVVLVTDCRKGLEAQTIESLLLASLVCP--RK 115
N.gru 76 QIIDFMVLVIDAVKGVQTQTAECIVIGEISC---NN 108
P.pal 86 QIIDMMFLVIDITKGIQTQTAECIVIGEITC---KK 118
P.tri 93 QIIDMVLLVVDAVKGWQAQTTECLVLAELTS---PY 125
P.ult 77 RIIDMVLLVVDAQKGLQPQTIESLLVAELAVA--HH 110
S.par 79 HIIDMALLVIDAVKGIQMQTIESTVLAEIAT---SH 111
T.tra 86 SIIDIMVLVVDAKAGFQTQTAECLVIGELTA---DT 118
cons 109 144
eEFSec 141 LVVVLNKIDLL-PE--GKRQAAIDKMTKKMQK-TLE 172
eEFSec_GTP_ 129 LVVVLNKIDLL-PE--GKRQAAIDKMTKKMQK-TLE 160
eEFSec_DomII_ 1 ------------------------------------ 0
B.hom 116 AIIALNKIDLI-PE--AERSDRIKTVISSLQK-TLS 147
C.mer 135 VVVALHKC---------------------------- 142
C.owc 118 LVVALNKIDQI-PE--DQRAQTIEKVTRGLAK-TFA 149
E.sil 139 VIVVLNKVDLI-PE--QERKARLRQAETEIAA-QLA 170
H.ara 116 LVIVLTKTDLL-SALDVERAAAIGAVTSEVQT-FVA 149
N.gru 109 LIVALNKVDMI-PA--DQREDRVDKIKKSLIKNVFS 141
P.pal 119 AIVVLNKIDQL-PI--ESRQNKID------------ 139
P.tri 126 LVVALNKADQF-PP--PERDQLLEQAAAKIRD-RLK 157
P.ult 111 VVIALNKVDLLLPE--SEREVRIRSLETEIQR-VLD 143
S.par 112 VIVVLNKVDLL-TD--KA--TQLPAMLATIRT-FLS 141
T.tra 119 LMVALNKIDLF-PE--EKRASKVAKMTKRVAA-TLK 150
cons 145 180
eEFSec 173 N----TKFRGAPIIPVAAKPGGPEAP---------- 194
eEFSec_GTP_ 161 N----TKFRGAPIIPVAAKPGGPEAP---------- 182
eEFSec_DomII_ 1 ------------------------------------ 0
B.hom 148 K----TRFKNASIV---------------------- 157
C.mer 143 ------------------------------------ 142
C.owc 150 T----TKFGQVAVIPVAARPATGPA----------- 170
E.sil 171 G----TKVPE-PLSGVTPPRPPSSCS---------- 191
H.ara 150 THFSSLKDVTIPVVPVVVGTGH-------------- 171
N.gru 142 Q----TKFKNPPIVSVCADPREESE----------- 162
P.pal 140 ------------------------------------ 139
P.tri 158 A----TRFANAPIVGVAACVGGEKVA---------- 179
P.ult 144 AKFPRLRGQNVPIVAVAAAPAD-SAD---------- 168
S.par 142 SS---PTLQDCPIVPVAAGDAD-G-A---------- 162
T.tra 151 P----TAFANSDILPVSASSGKRASKVAKMTKRVAA 182
cons 181 216
eEFSec 195 ---------------ETEAPQGIPELIEL------L 209
eEFSec_GTP_ 183 ---------------ETEAPQGIPELIEL------L 197
eEFSec_DomII_ 1 ------------------------------------ 0
B.hom 158 ------------------------------------ 157
C.mer 143 ------------------------------------ 142
C.owc 171 --------------------IGVENLIQVVQVEAVL 186
E.sil 192 ---------------EETSAMGIDTVAGE------L 206
H.ara 172 ------------------KTEGIPHLLEV------L 183
N.gru 163 ---------------SITKEQGLKNLIAE------F 177
P.pal 140 ---------------------GVDRLIKE------L 148
P.tri 180 ---------------AASEDMSKLEVRNT------L 194
P.ult 169 -----------------EAKVGISTLVET------I 181
S.par 163 -----------------RAPQGMPDLLAT------M 175
T.tra 183 TLKPTAFANSDILPVSASSGDGLSDLVDA------L 212
cons 217 252
eEFSec 210 TSQISIPTRDP-SGPFLMSVDHCFSIKGQGTVMTGT 244
eEFSec_GTP_ 198 TSQ--------------------------------- 200
eEFSec_DomII_ 1 ---------------FLMSVDHCFSIKGQGTVMTGT 21
B.hom 158 -------------APLYFIYDHCFQLAGKGCVMTGT 180
C.mer 143 ------------------------------------ 142
C.owc 187 AKSVPRQRHDS-AAPFVFAVDHCFAIKGQGTVLTGT 221
E.sil 207 SRRARVPSRRA-SAPLYFAFDHCFSVRGQGTILTGT 241
H.ara 184 RTHLQAPERDT-SGDFRLAVDHCFAVPGHGTVLTGT 218
N.gru 178 QKHVKISEKDE-NEPFLYMVDHCFTIKGKGTIITGT 212
P.pal 149 TNYVELPRRDD-QGPFLFEFDHCFQIKGQGSVMTGT 183
P.tri 195 QDKLPPPKRTP-EGSFYFSVDHCFSIRGRGTVLTGT 229
P.ult 182 RSHLYLPERNP-TGPFSLAIDHCFAIQGNGTILTGT 216
S.par 176 QRHLHLPTRSG-DGPLCYAIDHCFPLRGKGTVLTGT 210
T.tra 213 TAAVRLPTRNEAEDAFLFAIDHCFQVKGQGTVVTGT 248
cons 253 288
eEFSec 245 ILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSA 280
eEFSec_GTP_ 201 ------------------------------------ 200
eEFSec_DomII_ 22 ILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSA 57
B.hom 181 VLSGSVSVNDEIEFPSLHLTRKVKSIQMFHKGIDKV 216
C.mer 143 ------------------------------------ 142
C.owc 222 ALSGQIQVNENIEIPTAKLSRKIKSIQMFHRPVQQI 257
E.sil 242 VLTGEVKVNQLVELPSLRLQKKVKSMQMFRKPVSIA 277
H.ara 219 VLSGALSKGSELELLPSGMKTTVKTLQVFRQDVERC 254
N.gru 213 VLQGSVSIGKTIQIPSIGEEKKVKSIQMFKTPVDKA 248
P.pal 184 VLRGSVEINQNIHIPQLNIEKKVKSMQMFHKPVKKA 219
P.tri 230 VLNGAASVNDVLEFPTLGLDRKIKSIQMFKRQVQRI 265
P.ult 217 VLSGSVKVNDEVEIPSLQVVKKVKSMQMFKQSVTSA 252
S.par 211 VLSGTVRVNDTIAIPILGTEKKVKSLQMFHTSVEKA 246
T.tra 249 IQRGSVAVGQTIEFPALGLSKKVKSMQMFKAPVERA 284
cons 289 324
eEFSec 281 MQGDRLGICVTQFDPKLLERGLVCA-PESLHTVHAA 315
eEFSec_GTP_ 201 ------------------------------------ 200
eEFSec_DomII_ 58 MQGDRLGICVTQFDPKLLERGLVCA----------- 82
B.hom 217 LKGDRAGICVQFW----------------------- 229
C.mer 143 ------------------------------------ 142
C.owc 258 TAGDRAGICVTQFDASTLERGYACA-AGAVIFAHAL 292
E.sil 278 RAGDRVGMCVASLDAKLMERGVVTT-PGSVRPISAA 312
H.ara 255 VQGDRVGLRVNGLDPALVERALAVSPPGSLPAVTQV 290
N.gru 249 IKGDRIGIAVTKLDSKKLERGFACD-KGYIEIVDTI 283
P.pal 220 SQGDRVGICVTQLDANLLERGLLCT-PKTVPLLNGA 254
P.tri 266 QQGDRAGVCVSNLDAKLLERGIAAT-PGAVQLLKGA 300
P.ult 253 TQGDRVAIRVNGLDASLVERGMAIT-PHSMPYVTQV 287
S.par 247 IQGDRVGLRLHGLDAATLERGLAIT-PKSLSFVLNL 281
T.tra 285 VQGDRLGICVAQLNAKLLERGLACA-PGTIRAVSAA 319
cons 325 360
eEFSec 316 LISVEKIPYFRG-PLQTKAKFHITVGHETVMGRLMF 350
eEFSec_GTP_ 201 ------------------------------------ 200
eEFSec_DomII_ 83 ------------------------------------ 82
B.hom 230 ------------------------------------ 229
C.mer 143 ------------------------------------ 142
C.owc 293 IARVDKVRFFKL-PVLSKSRFHVSMGHETVMGTASF 327
E.sil 313 IALVRKVCR--------------------------- 321
H.ara 291 VIAVARVPLFQGGACKSGAKCHATVGHATVIATATF 326
N.gru 284 LANASRIRFFKK-EIKNSAKYHISIGHETVMGNVSL 318
P.pal 255 IVAIEKVRFYKN-EVKTKSQFHSQ------------ 277
P.tri 301 IALVRKVPYYVG-TLHSGSKFHISVGHTTIMATVTF 335
P.ult 288 VVPVHQIAFFQG-TCKSGAKFHATINHTTVVAIATF 322
S.par 282 VLQVHRVRFFGL-DCESGAKVHVTVGHSTVLAKATF 316
T.tra 320 VVRVSRIPYFRG-EIKSRAKFHLTVGHETVMATLQF 354
cons 361 396
eEFSec 351 FSPAPDNFDQEPILDSFNFSQEYLFQEQYLSKDLTP 386
eEFSec_GTP_ 201 ------------------------------------ 200
eEFSec_DomII_ 83 ------------------------------------ 82
B.hom 230 ------------------------------------ 229
C.mer 143 ------------------------------------ 142
C.owc 328 FTQENAS----------------------------- 334
E.sil 322 ------------------------------------ 321
H.ara 327 FA---------------------------------- 328
N.gru 319 I----------------------------------- 319
P.pal 278 ------------------------------------ 277
P.tri 336 WESLDG------------------------------ 341
P.ult 323 FSPEYVAQI-EPIADANS------------------ 339
S.par 317 FHGSHAS----------------------------- 323
T.tra 355 F----------------------------------- 355
cons 397 432
eEFSec 387 AVTDNDEADKKAGQATEGHCPRQQWALVEFEKPVTC 422
eEFSec_GTP_ 201 ------------------------------------ 200
eEFSec_DomII_ 83 ------------------------------------ 82
B.hom 230 -------------------------ALLQLEQTIYA 240
C.mer 143 ------------------------------------ 142
C.owc 335 -------------NSGQPPAPLATFALIELDHPVAC 357
E.sil 322 ------------------------------------ 321
H.ara 329 ------------------------FALLQFE----- 335
N.gru 320 ------------------------ARAIEFEKPVCC 331
P.pal 278 ------------------------YALLTFEHPVLC 289
P.tri 342 ------------------QESLLHWALLDFQIPVHC 359
P.ult 340 -----GGSDLKAVEEGKEIKSVSYFALLQFD----- 365
S.par 324 ------------------------FA-VELS----- 329
T.tra 356 ------------------------YAVLELESPVLC 367
cons 433 468
eEFSec 423 PRLCLVIGSRLDADI----HTNTCRLAFHGILLHGL 454
eEFSec_GTP_ 201 ------------------------------------ 200
eEFSec_DomII_ 83 ------------------------------------ 82
B.hom 241 PLGALLIGSQLNSQV----D-GTCRIAFYAKVIQAL 271
C.mer 143 ------------------------------------ 142
C.owc 358 LSNALLIGSRLDLDPD--VHTKACRLAFSGRVHEAL 391
E.sil 322 ------------------------------------ 321
H.ara 336 ------------------------------------ 335
N.gru 332 YPNSNYIASKLDTDI----NANMCRLAFNGKVIKMW 363
P.pal 290 PLNSVIIGSKLDVNL----DTSSCRIAFHGELVEGI 321
P.tri 360 PMDSLVIGSRLDTVDNSTGSASACRLAFSGRLMQSV 395
P.ult 366 ------------------------------------ 365
S.par 330 ------------------------------------ 329
T.tra 368 APDAMIIGSRLDSDV----DGNVCRLAFSGSL---- 395
cons 469 504
eEFSec 455 EDRN-YADSFLPRLKVYKLKHKHGLVERAMDDYSVI 489
eEFSec_GTP_ 201 ------------------------------------ 200
eEFSec_DomII_ 83 ------------------------------------ 82
B.hom 272 SPK----KEDLSVLRVFKPKQRTAIVDRIVNEREVI 303
C.mer 143 ------------------------------------ 142
C.owc 392 TDKS-YRETFLPKLKVFKRKSRTGTVERILDDYTLI 426
E.sil 322 ------------------------------------ 321
H.ara 336 -------------------------------RAVFC 340
N.gru 364 NKSNVSKEQLVNSLPVFKYKEKKAVVDRVVDANTII 399
P.pal 322 DVTN--KQLLNNHLHIYKIKAKEGQIERIHSESTLI 355
P.tri 396 DPG-----KDISKLRLYTPKERRGTISRLGDPHKVF 426
P.ult 366 -------------------------------QPVLC 370
S.par 330 ------------KLHIGKIKERHGLVEKCGEHGVAI 353
T.tra 396 ------------------------------------ 395
cons 505 540
eEFSec 490 GRSLFKK-ETNIQLFVGLKVHLS----TGELGIIDS 520
eEFSec_GTP_ 201 ------------------------------------ 200
eEFSec_DomII_ 83 ------------------------------------ 82
B.hom 304 GTNLTEK-GGTIAAFVGLDVVTK----SGLKGRIDA 334
C.mer 143 ------------------------------------ 142
C.owc 427 GKGLFKK-ETTLEPFLGLQVGLS----SGEVGEIEG 457
E.sil 322 ------------------------------------ 321
H.ara 341 ------P-PATLVVCSRLDL---------------- 353
N.gru 400 GKNLLTSKTQSLQFFIGKKIDILIDDQPRFSGIIDS 435
P.pal 356 GKNIFGK-DTDLSKFIGMKVIFD----NGMFDV--- 383
P.tri 427 GSDLFKK-ETNMKAFFGMKVQTE----RNEIGEIKS 457
P.ult 371 ------P-RDALVICSRLDL---------------- 383
S.par 354 VKDLFRK-ETNLDIFKGLTVQNE---RSRALGAIDG 385
T.tra 396 ------------------------------------ 395
cons 541 576
eEFSec 521 AFGQSGKFKIHIPGGLSPESKKILTPALKKRARAGR 556
eEFSec_GTP_ 201 ------------------------------------ 200
eEFSec_DomII_ 83 ------------------------------------ 82
B.hom 335 PFGKSGKFK--------------------------- 343
C.mer 143 ------------------------------------ 142
C.owc 458 AFGQSGKFRVRMRQAVSDATKATLAASDK------- 486
E.sil 322 ------------------------------------ 321
H.ara 354 -DAKRFSCRLAFY----------------------- 365
N.gru 436 PFGQSGKFK--------------------------- 444
P.pal 384 ------------------------------------ 383
P.tri 458 SFGTSGKYRVFFPAGTEAKEGEPL------------ 481
P.ult 384 -DPKKFACRLAFH----------------------- 395
S.par 386 AFGKTGKCRVQFTDGSTQPG---------------- 405
T.tra 396 ------------------------------------ 395
cons 577 612
eEFSec 557 GEATRQEESAERSEPSQHVVLSLTFKRYVFDTHKRM 592
eEFSec_GTP_ 201 ------------------------------------ 200
eEFSec_DomII_ 83 ------------------------------------ 82
B.hom 344 ------------------------------------ 343
C.mer 143 ------------------------------------ 142
C.owc 487 ------------------------------------ 486
E.sil 322 ------------------------------------ 321
H.ara 366 ------------------------------------ 365
N.gru 445 ------------------------------------ 444
P.pal 384 ------------------------------------ 383
P.tri 482 ---------------------ILRF----------- 485
P.ult 396 ------------------------------------ 395
S.par 406 ------------------------------------ 405
T.tra 396 ------------------------------------ 395
cons 613 648
eEFSec 593 VQSP 596
eEFSec_GTP_ 201 ---I 201
eEFSec_DomII_ 83 ---P 83
B.hom 344 ---V 344
C.mer 143 ---D 143
C.owc 487 PKGK 490
E.sil 322 ---F 322
H.ara 366 ---G 366
N.gru 445 ---V 445
P.pal 384 ---L 384
P.tri 486 KRFA 489
P.ult 396 ---G 396
S.par 406 DRLV 409
T.tra 396 ---V 396
cons 649 652