T-COFFEE, Version_8.99(Thu Feb 17 19:24:49 CET 2011 - Revision 594)
Cedric Notredame
CPU TIME:6 sec.
SCORE=96
*
BAD AVG GOOD
*
SecS : 96
SecSAAT : 98
A.tai : 96
B.hom : 96
C.mer : 96
C.owc : 96
E.sil : 96
H.ara : 95
N.gru : 93
P.pal : 95
P.tri : 95
P.ult : 96
S.par : 96
T.tra : 95
cons : 96
SecS 1 MNRESFAAGERLVSPAYVRQGCEARRSHEHLIRLLLEKGKCP 42
SecSAAT 1 ------------------------------------------ 0
A.tai 1 -----------------------------------LHQRRVP 7
B.hom 1 MNEKNFEYARSLIPATYVNQGRDAIKRRENLVKDLLTHRKIP 42
C.mer 1 -----------LADPAYVTVAEAARRSRTALFRQLLTQRRLL 31
C.owc 1 ---------------------------------------KWP 3
E.sil 1 -------------------------------VTALLSNRRLP 11
H.ara 1 ------------------------------------------ 0
N.gru 1 -----------LIQANHVKQALQAVNKQQKMYKTLLSQRQLP 31
P.pal 1 ---------------------------------------KLP 3
P.tri 1 -------------------------------LRTLLVNRRLP 11
P.ult 1 MNAKNAQLAEAFVAPTYVEQGLAAIRNREQLFTALLSQRRVP 42
S.par 1 ------------VDAAYIRQGSDALKSHEKKLTALLAQRKLP 30
T.tra 1 ----------------YVRQGGVSLGGRARAVRSLLSQRQLP 26
cons 1 42
SecS 43 ENGWDESTLELFLHELAIMDSNNFL------------GNCGV 72
SecSAAT 1 ------------------------------------------ 0
A.tai 8 DEPWDELSITLLLQELAGMDMNNAC------------RVAGA 37
B.hom 43 EIGWDDQSIELFLNDLSLMDSNNFL------------GNSGV 72
C.mer 32 PQGLDEHTVRLLVDELAGLDANQFI------------DQANV 61
C.owc 4 ELGWDEMSIELLLSDLAQMDSNNFP------------ANIGA 33
E.sil 12 TRGWDDAQIEYLLTEISLMDSNNFS------------ENVGV 41
H.ara 1 ------------------------------------------ 0
N.gru 32 KEGFSDQQIESLLSFFASMDTNNYE------------NHIGI 61
P.pal 4 DVGWDDNVIEWFINEISMMDSNNFI------------ENIGV 33
P.tri 12 EHGWSDVQIQHVLYTMATLDTNNKRSGSSSSDDSGSSRWCGV 53
P.ult 43 DDGWDEQTVELVLQSLAAMDSNNFR------------TNIGA 72
S.par 31 EDGWDDLSIQVLLNDLAQMDSNNFA------------HNAGA 60
T.tra 27 RQGWNEASISAFLDELATMDSNNFA------------DRAGV 56
cons 43 84
SecS 73 GEREGRVASALVARRHYRFIHGIGR------------SGDIS 102
SecSAAT 1 ------------------------------------------ 0
A.tai 38 GEREGRIFSPLVYRRHFGMSHGIGRLYLFYAGSSICRSGDIM 79
B.hom 73 GEREGRIASTLVAKRHFYLAHGIGR------------AGDVA 102
C.mer 62 GEREGRIYSELVRARHFGMAHGMGR------------AGDLA 91
C.owc 34 GEREARVYSDLVARRHFRMAHGIGR------------SGDIA 63
E.sil 42 GEREGRVYSGLVARRNFRLSHGVGR------------SGDIA 71
H.ara 1 ------------------------------------------ 0
N.gru 62 GEREGRVFSKLVEKRHFYLSHGIGR------------SGELT 91
P.pal 34 GEREGRLYSQIVARRHFGLAHGIGR------------SGDIN 63
P.tri 54 GEREGRVYSALVSSRHFGLSHGVGR------------SGDIA 83
P.ult 73 GEREARVFSSLVAKRHFHLCHGVGR------------SGDVA 102
S.par 61 GEREARVASSLVRNRCFHLAHGVGR------------SGDIC 90
T.tra 57 GEREARVFSPLVARRHFGLGHGVGR------------SGELA 86
cons 85 126
SecS 103 AVQPKAAGSSLLNKITNSLVLDIIKL-AGVH---TVANCFVV 140
SecSAAT 1 ------------------------------------------ 0
A.tai 80 ALQPKAAGSSLINILSQYLVLDIIRE-AGIK---SAAGCLVL 117
B.hom 103 AIQPKAAGSSLICELTRKMAVDFIQT-CGIT---EVKDCIVL 140
C.mer 92 ASQPKACGASILVRLCAALLLDALHV-AGFR---SCRRVALL 129
C.owc 64 AIQPKAAGSSLIMKLVNIMCLDVIRL-AGVH---AANACIAL 101
E.sil 72 EVQPKAAGSSLLAKLTHALAKDALRL-AGLG---NARACLVL 109
H.ara 1 ----KAAGSSLLVQLANALAKDVLRL-AGLR---AVXSALVL 34
N.gru 92 SNQPKAAGSSIILQLCNYLVNHAIQL-AGCK---NVKKSIVV 129
P.pal 64 EQQPKAAGSSLIQKLTNYLVLDALRI-AGLE--KSIDACLVL 102
P.tri 84 EPQPKALGSTVLAKLTLCLVLDAVRRGSGLHPQTAAKSGILL 125
P.ult 103 AVQPKAAGSSLIVQLTNALAKDLLRE-AGLR---SITSALVL 140
S.par 91 AVQPKAAGSSLLVQLTNCLVLDMLHL-AGIK---NAKSAIVL 128
T.tra 87 AVQPKAAGSSLMYKLANALVLHALRL-AGMR---VAKKAIIV 124
cons 127 168
SecS 141 PMATGMSLTLCFLTLRHK---------------------R-P 160
SecSAAT 1 ------------------------------------------ 0
A.tai 118 PMATGMTLHFCLSQFHQ------------------------- 134
B.hom 141 PLATGMSISMCLLSLRLN---------------------N-P 160
C.mer 130 PIATGMAMTLCLLALRW---------------------QR-P 149
C.owc 102 PLATGMAMVMTLLTLAQT---------------------RPP 122
E.sil 110 PMATGMSLALTFAALRAA---------------------K-P 129
H.ara 35 PVATGMSLCWCXLQLKKT---------------------R-P 54
N.gru 130 PMCTGMTLALCLRSLANS-------------------LEQ-P 151
P.pal 103 PMATGMTIALTLMTMRQT---------------------K-P 122
P.tri 126 PLCTGMSMALVLGTLRQLQD-----NHQTSANA----AIK-P 157
P.ult 141 PVATGMSLTLVLLTLRAQ---------------------K-P 160
S.par 129 PVATGMALLFAMLTLQAQARV----------------PGR-P 153
T.tra 125 PTATGMALVLCLLALCAQDEEANREEHGSSADDGGASESR-H 165
cons 169 210
SecS 161 -KAKYIIWPRIDQKSCFKSMITAGFEPVVIENVL------EG 195
SecSAAT 1 ------------------------------------------ 0
A.tai 135 --GSDILWSRIDQKSCFKAMLLTGAKPKIMPVKQ------NG 168
B.hom 161 -TAKYVIWFRVDQKTCLKSILTTGLEPIIIDPVP------EG 195
C.mer 150 -AADRVLWIRIDQKACLKCIRAAGYQIDVLENKL------DG 184
C.owc 123 -SARKVLWLRIDQKSCIKAITACGFEVVVVDNAI------EG 157
E.sil 130 -AAKTIVWPRMDQKSCLKAIVAAGFTPIVVENLI------QG 164
H.ara 55 -AARYVIWPRVDQKSCFKAILAAGLTPLVLANCLVVADEVCG 95
N.gru 152 -NKKYVIWPRIDQQSVLKSIDTAGFTPIVIENVL------NE 186
P.pal 123 -KATYVLWPRIDQKSCLKSIVTASLTPIVIENQL------ID 157
P.tri 158 -YRNIVLWSRIDQKSCFKAIQSAGLECVVVPTRL------AG 192
P.ult 161 -DAKYVIWPRIDQKSCFKSILTAGLTPLVLENTLS----EDG 197
S.par 154 HTKRYVLWPRIXQKSCFKSMVTAGLEPVVIENVL------DG 189
T.tra 166 -ARRYVIWPRIDQKTAFKAILTAGLTPLVVEPRKC---PRGS 203
cons 211 252
SecS 196 D-ELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLE 236
SecSAAT 1 ------DLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLE 36
A.tai 169 D-ALQTDVDAIRNALIAGGKDNIRCVITTTSTFAPREPDDVV 209
B.hom 196 D-ELNTNLGALREKLESIKREEILCIIPTTSVFAPRLPDDIV 236
C.mer 185 D-QVVTDMEALEKRLAASDPSRYAAVISTTSCFAPRAPDRVV 225
C.owc 158 D-EVRTDLSALQHQVNTVGKDNILCIVSTTSCFAPRCPDRIV 198
E.sil 165 D-AVATDVDGVRAAVESCGAENVLCVVTTTSCFAPRLPDKVD 205
H.ara 96 G-XLKTDLVGMAALMDQYGSESILAVSSTTSCFAPRAYDAVK 136
N.gru 187 DGSIEANLQSIESKIQQVGAENILCVLSTTSCFAPRVPDDVF 228
P.pal 158 D-VITTNLQTIEETIKSLGAENILCVMSTTSCFAPRIPDKII 198
P.tri 193 D-AVVTDLDAFQASLLTYG-DRVLAVVTTTSCFAPRVPDQVD 232
P.ult 198 D-QLRTDMDGLQRLIDAHRSGDVLAVLSTTSCFAPRGYDDVE 238
S.par 190 D-ELRTDLAALEAKMRELGPENILCVLSTTSCFAPRGYDRVD 230
T.tra 204 D-ALVTDVDGVRAAIESVGADNVLCILSTTSCFAPRTPDKVV 244
cons 253 :: . : .: .*** **** * : 294
SecS 237 ELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARV--GRID 276
SecSAAT 37 ELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARV--GRID 76
A.tai 210 AVAK-------------------------------------- 213
B.hom 237 GVSKLAKEFSVPVIVNNAYGLQSGATCKAIDRAIRV--GRID 276
C.mer 226 AIAQLCARYGIPHLINHAYGVQSRRCNGLVCAACRL--GRVD 265
C.owc 199 EIAKICATESIPHVINNAYGIQSSKITALIQDAHKA--GRVD 238
E.sil 206 EVARICAASGVGHVINNAYGVQCSKTCRLVNRAMAV--GRVD 245
H.ara 137 EIAQLCQERNIAHVINNAYGVQASACVHQIDLAMRI--GRVD 176
N.gru 229 EIGKICFKYGIGQVVNNAYGVQSKIIMERINKTIASSKSTIT 270
P.pal 199 EISELCKKYDVGHVINNAYGLQCTKITHQISQSVRL--GRVD 238
P.tri 233 AVARLCAEQCVPHVINNAYGLQSSDTSKLLNRACAV--GRVD 272
P.ult 239 AIARVCQTHDIAHVINNAYGVQASKCTHVVNQAMRV--GRVD 278
S.par 231 EIAQLCRQYDIGHVINNAYGLQSSKCTHLVNQAFRL--GRVD 270
T.tra 245 ALAELASEYGIGHVVNNAYGVQSRRCMGLLNEAARV--GRLD 284
cons 295 :. 336
SecS 277 AFVQSLDKNFMVPVGGAIIAG-FNDSFIQ-------EISKMY 310
SecSAAT 77 AFVQSLDKNFMVPVGGAIIAG-FN------------------ 99
A.tai 214 ------------------------------------------ 213
B.hom 277 MLVSSTDKNMLVPVGGALVYS-PQSGMVD-------LVRKNY 310
C.mer 266 AVIFSFDKNFMVPVGGAGVAG-TSPTFIE-------AVESLY 299
C.owc 239 AFVQSSDKNLMVPVGGALVAG-HDRAFIK-------RIGEMY 272
E.sil 246 AVVQSTDKNFLVPVGGAVVCG-PDATFIEQARVTPEEISKSY 286
H.ara 177 AVVQSLDKNFLVPVGGAIVCS-TSSEIVD-------SVAKFY 210
N.gru 271 CFVQSTDKNFMVPVGGAVVSSGSDITFID-------KVSKIY 305
P.pal 239 YVVQSTDKNFMVPVGGAIVAS-PLAENID-------RLAKNY 272
P.tri 273 AIVCSTDKNFMVPIGGAIVLS-PDESLIQ-------NVGKVY 306
P.ult 279 AIVQSLDKNFMVPVGGAIVCA-PSAEMVA-------SVSKCY 312
S.par 271 ACIQSTDKNFLVPVGGAVISX-SPQAFVQ-------AIGKMY 304
T.tra 285 AFVQSTDKNFMVPVGGAVVAS-ANKAFVD-------AVSLLY 318
cons 337 378
SecS 311 PGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQI 352
SecSAAT 100 ------------------------------------------ 99
A.tai 214 ------------------------------------------ 213
B.hom 311 PGRASMSPILDVFITLLSMGKRELRSVLKEREDCYQYLLDRL 352
C.mer 300 PGRASVAPVVDLFITLLQLGRDGFSGLLRERERRFQRFQAQL 341
C.owc 273 PGRASAAPSVDIFITLLSMGQQGFRSLLKQRKVVFEQLRAKL 314
E.sil 287 AGRASSGPCLDLFITLLSMGQEGWRRLLAERETLVEPFRRRL 328
H.ara 211 PGRASATPALDFFITMLQMGKNGYRRLLEERKHLAAYMREKL 252
N.gru 306 AGRASMTPILDLFITLLSMGKDGWEKLLAEREVLFQHFVSEI 347
P.pal 273 PGRASGAPILDLFITLLSMGRAGYRRLLDERKQLLPYFIDEM 314
P.tri 307 AGRASASPMLDLFITLCSMGLRGYQQLLTSRRILLPTFTERL 348
P.ult 313 PGRAAITPTLDFFITMLQMGRKGYRQLLQERKTLAKYLQEQL 354
S.par 305 PGRASNAPALDLFITMLHLGRRGYKALLDERKRLVPYFSAAL 346
T.tra 319 PGRASAAPIVDLFITLLAMGEEGWTELLASRADVFGYAQAEL 360
cons 379 420
SecS 353 KKLSEAYN-ERL----LHTPHNPISLAMTLKTLDEH------ 383
SecSAAT 100 ------------------------------------------ 99
A.tai 214 ------------------------------------------ 213
B.hom 353 GEVAGRYK-QRV----LRTPRNPISIAVTLDNPFPEDD---- 385
C.mer 342 APVLAKHG-ERL----LHTPDNPISFAISLEHTMLE------ 372
C.owc 315 GAFAVSQG-ERL----LETPHNPISLAITLSTFG-------- 343
E.sil 329 REVAESNG-ERL----LESSGNTISFAVTLDSLXQAS----- 360
H.ara 253 EVLAAEEG-EHV----LKVSTNEISYAMTLATFCSEVE---- 285
N.gru 348 ESKLTNTQ-SKFSLIRGSLQRNQISFALSIDLP--------- 379
P.pal 315 SKVVKEVGVGRI----LNTQANTISFGIAIDSNDVSK----- 347
P.tri 349 KEVANKYG-ERV----LECRTNCISFGVTLDGLVRPPRQDED 385
P.ult 355 QIVAHEVG-ERV----LHVPFNEISFAMTLSTFSTASD---- 387
S.par 347 TSVATAHG-ERV----LVTRHNDISFCLTLSHVG-------- 375
T.tra 361 AQVAERTG-LRL----LDVRGNDISMALSLDALSSEC----- 392
cons 421 462
SecS 384 -------RDKAVTQLGSMLFTRQVSGARVVPL--GSMQTV-S 415
SecSAAT 100 ------------------------------------------ 99
A.tai 214 ------------------------------------------ 213
B.hom 386 ---SFEYSDEDITKFGAMLYTRGVSGSRCVGF--HNKKSV-G 421
C.mer 373 -------GGIEPTAIGSMLYARRCSGPRAVLG--TERRLV-Q 404
C.owc 344 ---------SDATRLGSFLFTRCVSGTRCAVALAPATTSV-G 375
E.sil 361 ------GAPASAAFFGSMLFTRCVSGTRVVPR--EQHKCV-G 393
H.ara 286 ---DRQEKSRRLTLLGAMLFSRGVCGARVVSC--LDSKCI-A 321
N.gru 380 --------KEEALKVGVSLFYRNCTGPRVVLK--GSSKTVLP 411
P.pal 348 ----SVLAKDNISMIGSKLFMRSCSGARVIDVQSGQKKSV-G 384
P.tri 386 DVAYRTSVSRDVSSLGAMLFQRCVSGTRVVPR--GTVQRM-G 424
P.ult 388 ----ARTKAQELTFFGAMLFSRGVSGTRVVSC--LDNKTI-G 422
S.par 376 --------GNDATFLGSMLFSRGVSGTRVVTG--TSRATI-V 406
T.tra 393 -----GGDDDAVTMLGSMLFVRSVSGARVVVP--SKTKTI-G 426
cons 463 504
SecS 416 GYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRC 457
SecSAAT 100 ------------------------------------------ 99
A.tai 214 ------------------------------------------ 213
B.hom 422 KYEFANYGGHTDHYPHAYFTSAAAIGVKKEEIDVFIDRLEKN 463
C.mer 405 GVLLAGYGAHIADYPVPYLNLAAAIGIRDIDIERFCRRLDEV 446
C.owc 376 PVSLSNFGAHHSAYHGAYLTAAAAIGMTEQEVDALIDRLTAA 417
E.sil 394 GIDFNGYGASVTGYPHDYLTAACAAGLSTEELDEFLIRLDKA 435
H.ara 322 GYEFDSFGAHYDEFPVAYVTFACVLGMQKTEVDMLMTKLRKT 363
N.gru 412 HLSFVGYGSHTDSYPHHYITLACAIGIEKEEIESFLTLLN-- 451
P.pal 385 NIDFKNYGSHIDNYPTSYLTVACAIGITKEDIDLFSKRLKKV 426
P.tri 425 GMEFCGFGSSHDAYPHAYLTAACAIGLTASEGDDFFTRLDQT 466
P.ult 423 GYTFESYGAHSDHFPAPYLTVACAIGMTKDEVDALVVKLRKT 464
S.par 407 GHAFEGFGAHSATYPTAYLSAACAIGMTQD------------ 436
T.tra 427 PVTFAHYGSHSSASSEPYVNVAAAIGMTSTDIDRFVVRFEKT 468
cons 505 546
SecS 458 LKAVRKERSKESDDNYDKTEDVDIEEMALKLDNVLLDTYQDA 499
SecSAAT 100 ------------------------------------------ 99
A.tai 214 ------------------------------------------ 213
B.hom 464 WKQYQKDL---------------------------------E 472
C.mer 447 LGQVRG------------------------------------ 452
C.owc 418 FKDL-------------------------------------- 421
E.sil 436 LRKAKAE----------------------------------R 443
H.ara 364 IHDWRKK----------------------------------- 370
N.gru 452 ------------------------------------------ 451
P.pal 427 ------------------------------------------ 426
P.tri 467 LHEFQKRQR--------------------------------R 476
P.ult 465 IHEWRTKHNRSS---------------------------SNS 479
S.par 437 ------------------------------------------ 436
T.tra 469 LAAWRKAHA--------------------------------S 478
cons 547 588
SecS 500 SS 501
SecSAAT 100 -D 100
A.tai 214 -V 214
B.hom 473 KK 474
C.mer 453 TR 454
C.owc 422 -R 422
E.sil 444 AE 445
H.ara 371 QN 372
N.gru 452 -K 452
P.pal 427 -L 427
P.tri 477 RA 478
P.ult 480 VD 481
S.par 437 -V 437
T.tra 479 PS 480
cons 589 590