T-COFFEE, Version_8.99(Thu Feb 17 19:24:49 CET 2011 - Revision 594)
Cedric Notredame
CPU TIME:5 sec.
SCORE=94
*
BAD AVG GOOD
*
SecS : 95
SecSAAT : 97
A.tai : 92
B.hom : 95
C.mer : 95
C.owc : 95
E.sil : 96
H.ara : 92
N.gru : 92
P.pal : 94
P.tri : 94
P.ult : 95
S.par : 95
T.tra : 94
cons : 94
SecS 1 MNRESFAAGERLVSPAYVRQGCEARRSHEHLIRLLLEKGKCP 42
SecSAAT 1 ------------------------------------------ 0
A.tai 1 ------------------------------------------ 0
B.hom 1 ------------------------------------------ 0
C.mer 1 MDADLLEKARALADPAYVTVAEAARRSRTALFRQLLTQRRLL 42
C.owc 1 ----------------------------------LSRQRKWP 8
E.sil 1 -----------------TRKGRMHLFSYNTQVTALLSNRRLP 25
H.ara 1 ---------------------------------------KLP 3
N.gru 1 -----------LIQANHVKQALQAVNKQQKMYKTLLSQRQLP 31
P.pal 1 ---------------------------------------KLP 3
P.tri 1 ------------------------------------------ 0
P.ult 1 MNAKNAQLAEAFVAPTYVEQGLAAIRNREQLFTALLSQRRVP 42
S.par 1 -----------FVDAAYIRQGSDALKSHEKKLTALLAQRKLP 31
T.tra 1 MDEGNLKLAQEFLPEEYVRQGGVSLGGRARAVRSLLSQRQLP 42
cons 1 42
SecS 43 ENGWDESTLELFLHELAIMDSNNFLGNCGVGEREGRVASALV 84
SecSAAT 1 ------------------------------------------ 0
A.tai 1 ---------------------NNACRVAGAGEREGRIFSPLV 21
B.hom 1 ---------RLFLNDLSLMDSNNFLGNSGVGEREGRIAST-V 32
C.mer 43 PQGLDEHTVRLLVDELAGLDANQFIDQANVGEREGRIYSELV 84
C.owc 9 ELGWDEMSIELLLSDLAQMDSNNFPANIGAGEREARVYSDLV 50
E.sil 26 TRGWDDAQIEYLLTEISLMDSNNFSENVGVGEREGRVYSGLV 67
H.ara 4 ------------------------------GRRSWCSWPTL- 14
N.gru 32 KEGFSDQQIESLLSFFASMDTNNYENHIGIGEREGRVFSKLV 73
P.pal 4 DVGWDDNVIEWFINEISMMDSNNFIENIGVGEREGRLYSQIV 45
P.tri 1 ---------------------------CGVGEREGRVYSALV 15
P.ult 43 DDGWDEQTVELVLQSLAAMDSNNFRTNIGAGEREARVFSSLV 84
S.par 32 EDGWDDLSIQVLLNDLAQMDSNNFAHNAGAGEREARVASSLV 73
T.tra 43 RQGWNEASISAFLDELATMDSNNFADRAGVGEREARVFSPLV 84
cons 43 84
SecS 85 ARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKITNSLVLDII 126
SecSAAT 1 ------------------------------------------ 0
A.tai 22 YRRHFGMSHGIGRSGDIMALQPKAAGSSLINILSQYLVLDII 63
B.hom 33 AKRHFYLAHGIGRAGDVAAIQ-KAAGSSLICELTRKMAVDFI 73
C.mer 85 RARHFGMAHGMGRAGDLAASQPKACGASILVRLCAALLLDAL 126
C.owc 51 ARRHFRMAHGIGRSGDIAAIQPKAAGSSLIMKLVNIMCLDVI 92
E.sil 68 ARRNFRLSHGVGRSGDIAEVQPKAAGSSLLAKLTHALAKDAL 109
H.ara 15 SRKTCCVWRGCEQYKR--------IG---------------- 32
N.gru 74 EKRHFYLSHGIGRSGELTSNQPKAAGSSIILQLCNYLVNHAI 115
P.pal 46 ARRHFGLAHGIGRSGDINEQQPKAAGSSLIQKLTNYLVLDAL 87
P.tri 16 SSRHFGLSHGVGRSGDIAEPQPKALGSTVLAKLTLCLVLDAV 57
P.ult 85 AKRHFHLCHGVGRSGDVAAVQPKAAGSSLIVQLTNALAKDLL 126
S.par 74 RNRCFHLAHGVGRSGDICAVQPKAAGSSLLVQLTNCLVLDML 115
T.tra 85 ARRHFGLGHGVGRSGELAAVQPKAAGSSLMYKLANALVLHAL 126
cons 85 126
SecS 127 KL-AGVH---TVANCFVVPMATGMS-LTLCFLTLRH--KR-P 160
SecSAAT 1 ------------------------------------------ 0
A.tai 64 RE-AGIK---SAAGCLVLPMATGMT-LHFCLSQFH------- 93
B.hom 74 QT-CGIT---EVKDCIVLPLATGMS-ISMCLLSLRL--NN-P 107
C.mer 127 HV-AGFR---SCRRVALLPIATGMA-MTLCLLALRW--QR-P 160
C.owc 93 RL-AGVH---AANACIALPLATGMA-MVMTLLTLAQ--TRPP 127
E.sil 110 RL-AGLG---NARACLVLPMATGMS-LALTFAALRA--AK-P 143
H.ara 33 ------------------AACSDWDVAMLVLLQLKK--TR-P 53
N.gru 116 QL-AGCK---NVKKSIVVPMCTGMT-LALCLRSLANSLEQ-P 151
P.pal 88 RI-AGLE--KSIDACLVLPMATGMT-IALTLMTMRQ--TK-P 122
P.tri 58 RRGSGLHPQTAAKSGILLPLCTGMS-MALVLGTLRQ--LQ-D 95
P.ult 127 RE-AGLR---SITSALVLPVATGMS-LTLVLLTLRA--QK-P 160
S.par 116 HL-AGIK---NAKSAIVLPVATGMA-LLFAMLTL-------- 144
T.tra 127 RL-AGMR---VAKKAIIVPTATGMA-LVLCLLALCE--SR-H 160
cons 127 168
SecS 161 KAKYIIWPRIDQKSCFKSMITAGFEPVVIENVL---EGD-EL 198
SecSAAT 1 ------------------------------------------ 0
A.tai 94 QGSDILWSRIDQKSCFKAM----------------------- 112
B.hom 108 TAKYVIWFRVDQKTCLKSILTTGLEPIIIDPVP---EGD-EL 145
C.mer 161 AADRVLWIRIDQKACLKCIRAAGYQIDVLENKL---DGD-QV 198
C.owc 128 SARKVLWLRIDQKSCIKAITACGFEVVVVDNAI---EGD-EV 165
E.sil 144 AAKTIVWPRMDQKSCLKAIVAAGFTPIVVENLI---QGD-AV 181
H.ara 54 AARYVIWPRVDQKSCFKAILAAGLTPLVLANCL--------L 87
N.gru 152 NKKYVIWPRIDQQSVLKSIDTAGFTPIVIENVL---NEDGSI 190
P.pal 123 KATYVLWPRIDQKSCLKSIVTASLTPIVIENQL---IDD-VI 160
P.tri 96 NQNIVLWSRIDQKSCFKAIQSAGLECVVVPTRL---AGD-AV 133
P.ult 161 DAKYVIWPRIDQKSCFKSILTAGLTPLVLENTLSE-DGD-QL 200
S.par 145 ----------QQKSCFKSMVTAGLEPVVIENVL---DGD-EL 172
T.tra 161 ARRYVIWPRIDQKTAFKAILTAGLTPLVVEPRKCPRGSD-AL 201
cons 169 210
SecS 199 RTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAV 240
SecSAAT 1 --DLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAV 40
A.tai 113 ------------------------------------------ 112
B.hom 146 NTNLGALREKLESIKREEILCIIPTTSVFAPRLPDDIVGVSK 187
C.mer 199 VTDMEALEKRLAASDPSRYAAVISTTSCFAPRAPDRVVAIAQ 240
C.owc 166 RTDLSALQHQVNTVGKDNILCIVSTTSCFAPRCPDRIVEIAK 207
E.sil 182 ATDVDGVRAAVESCGAENVLCVVTTTSCFAPRLPDKVDEVAR 223
H.ara 88 KTDLVGMAALMDQYGSESILAVSSTTSCFAPRAYDAVKEIAQ 129
N.gru 191 EANLQSIESKIQQVGAENILCVLSTTSCFAPRVPDDVFEIGK 232
P.pal 161 TTNLQTIEETIKSLGAENILCVMSTTSCFAPRIPDKIIEISE 202
P.tri 134 VTDLDAFQASLLTYG-DRVLAVVTTTSCFAPRVPDQVDAVAR 174
P.ult 201 RTDMDGLQRLIDAHRSGDVLAVLSTTSCFAPRGYDDVEAIAR 242
S.par 173 RTDLAALEAKMRELGPENILCVLSTTSCFAPRGYDRVDEIAQ 214
T.tra 202 VTDVDGVRAAIESVGADNVLCILSTTSCFAPRTPDKVVALAE 243
cons 211 252
SecS 241 ICANYDIPHIVNNAYGVQSSKCMHLIQQGARV--GRIDAFVQ 280
SecSAAT 41 ICANYDIPHIVNNAYGVQSSKCMHLIQQGARV--GRIDAFVQ 80
A.tai 113 ------------------------------------------ 112
B.hom 188 LAKEFSVPVIVNNAYGLQSGATCKAIDRAIRV--GRIDMLVS 227
C.mer 241 LCARYGIPHLINHAYGVQSRRCNGLVCAACRL--GRVDAVIF 280
C.owc 208 ICATESIPHVINNAYGIQSSKITALIQDAHKA--GRVDAFVQ 247
E.sil 224 ICAASGVGHVINNAYGVQCSKTCRLVNRAMAV--GRVDAVVQ 263
H.ara 130 LCQERNIAHVINNAYGVQASACVHQIDLAMRI--GRVDAVVQ 169
N.gru 233 ICFKYGIGQVVNNAYGVQSKIIMERINKTIASSKSTITCFVQ 274
P.pal 203 LCKKYDVGHVINNAYGLQCTKITHQISQSVRL--GRVDYVVQ 242
P.tri 175 LCAEQCVPHVINNAYGLQSSDTSKLLNRACAV--GRVDAIVC 214
P.ult 243 VCQTHDIAHVINNAYGVQASKCTHVVNQAMRV--GRVDAIVQ 282
S.par 215 LCRQYDIGHVINNAYGLQSSKCTHLVNQAFRL--GRVDACIQ 254
T.tra 244 LASEYGIGHVVNNAYGVQSRRCMGLLNEAARV--GRLDAFVQ 283
cons 253 294
SecS 281 SLDKNFMVPVGGAIIAGF-NDSFIQEISKMYPGRASASPSLD 321
SecSAAT 81 SLDKNFMVPVGGAIIAGF-N---------------------- 99
A.tai 113 ------------------------------------------ 112
B.hom 228 STDKNMLVPVGGALVYSP-QSGMVDLVRKNYPGRASMSPILD 268
C.mer 281 SFDKNFMVPVGGAGVAGT-SPTFIEAVESLYPGRASVAPVVD 321
C.owc 248 SSDKNLMVPVGGALVAGH-DRAFIKRIGEMYPGRASAAPSVD 288
E.sil 264 STDKNFLVPVGGAVVCGP-DATFIEQVGKSYAGRASSGPCLD 304
H.ara 170 SLDKNFLVPVGGAIVCST-SSEIVDSVAKFYPGRASATPALD 210
N.gru 275 STDKNFMVPVGGAVVSSGSDITFIDKVSKIYAGRASMTPILD 316
P.pal 243 STDKNFMVPVGGAIVASP-LAENIDRLAKNYPGRASGAPILD 283
P.tri 215 STDKNFMVPIGGAIVLSP-DESLIQNVGKVYAGRASASPMLD 255
P.ult 283 SLDKNFMVPVGGAIVCAP-SAEMVASVSKCYPGRAAITPTLD 323
S.par 255 STDKNFLVPVGGAVISVT-SGL-CTSDRQDV----------- 283
T.tra 284 STDKNFMVPVGGAVVASA-NKAFVDAVSLLYPGRASAAPIVD 324
cons 295 336
SecS 322 VLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYN-ER 362
SecSAAT 100 ------------------------------------------ 99
A.tai 113 ------------------------------------------ 112
B.hom 269 VFITLLSMGKRELRSVLKEREDCYQYLLDRLGEVAGRYK-QR 309
C.mer 322 LFITLLQLGRDGFSGLLRERERRFQRFQAQLAPVLAKHG-ER 362
C.owc 289 IFITLLSMGQQGFRSLLKQRKVVFEQLRAKLGAFAVSQG-ER 329
E.sil 305 LFITLLSMGQEGWRRLLAERETLF------------------ 328
H.ara 211 FFITMLQMGKNGYRRLLEERKHLAAYMREKLEVLAAEEG-EH 251
N.gru 317 LFITLLSMGKDGWEKLLAEREVLFQHFVSEIESKLTNTQ-SK 357
P.pal 284 LFITLLSMGRAGYRRLLDERKQLLPYFIDEMSKVVKEVGVGR 325
P.tri 256 LFITLCSMGLRGYQQLLTSRRILLPTFTERLKEVANKYG-ER 296
P.ult 324 FFITMLQMGRKGYRQLLQERKTLAKYLQEQLQIVAHEVG-ER 364
S.par 284 ------------------------------------------ 283
T.tra 325 LFITLLAMGEEGWTELLASRADVFGYAQAELAQVAERTG-LR 365
cons 337 378
SecS 363 L----LHTPHNPISLAMTLKTLDEH-----RDKAVTQLGSML 395
SecSAAT 100 ------------------------------------------ 99
A.tai 113 ------------------------------------------ 112
B.hom 310 V----LRTPRNPISIAVT------------------------ 323
C.mer 363 L----LHTPDNPISFAISLEHTMLE-----GGIEPTAIGSML 395
C.owc 330 L----LETPHNPISLG-------------------------- 341
E.sil 329 --------------------------------------GSML 332
H.ara 252 V----LKVSTNEMTLATFCSEVE---DRQEKSRRLTLLGAML 286
N.gru 358 FSLIRGSLQRNQISFALSIDLPK---------EEALKVGVSL 390
P.pal 326 I----LNTQANTISFGIAIDSNDVS-KSVLAKDNISMIGSKL 362
P.tri 297 V----LECRTNCISFGVTLDGLRTS-----VSRDVSSLGAML 329
P.ult 365 V----LHVPFNEISFAMTLSTFSTASDARTKAQELTFFGAML 402
S.par 284 ------------------------------------------ 283
T.tra 366 L----LDVRGNDISMALSLDALSSE--CGGDDDAVTMLGSML 401
cons 379 420
SecS 396 FTRQVSGARVVP--LGSMQTV-SGYTFRGFMSHTNNYPCAYL 434
SecSAAT 100 ------------------------------------------ 99
A.tai 113 ------------------------------------------ 112
B.hom 324 ------------------------------------------ 323
C.mer 396 YARRCSGPRAVL--GTERRLV-QGVLLAGYGAHIADYPVPYL 434
C.owc 342 ------------------------------------------ 341
E.sil 333 FTRCVSGTRVVP--REQHKCV-GGIDFNGYGASVTGYPHDYL 371
H.ara 287 FSRGVCGA---------------------------------- 294
N.gru 391 FYRNCTGPRVVL--KGSSKTVLPHLSFVGYGSHTDSYPHHYI 430
P.pal 363 FMRSCSGARVIDVQSGQKKSV-GNIDFKNYGSHIDNYPTSYL 403
P.tri 330 FQRCVSGTRVVP--RGTVQRM-GGMEFCGFGSSHDAYPHAYL 368
P.ult 403 FSRGVSGTRY-------------------------------- 412
S.par 284 ------------------------------------------ 283
T.tra 402 FVRSVSGARVVV--PSKTKTI-GPVTFAHYGSHSSASSEPYV 440
cons 421 462
SecS 435 NAASAIGMKMQDVDLFIKRLDRCLKAVRKERSKESDDNYDKT 476
SecSAAT 100 ------------------------------------------ 99
A.tai 113 ------------------------------------------ 112
B.hom 324 ------------------------------------------ 323
C.mer 435 NLAAAIGIRDIDIERFCRRLDEVLGQVR-------------- 462
C.owc 342 ------------------------------------------ 341
E.sil 372 TAACAAGLSTEELDEFLIRLDKALRKAKA------------- 400
H.ara 295 ------------------------------------------ 294
N.gru 431 TLACAIGIEKEEIESFLTLLN--------------------- 451
P.pal 404 TVACAIGITKEDIDLFSKRLKKV------------------- 426
P.tri 369 TAACAIGLTASEGDDFFTRLDQTLHEFQKRQ----------- 399
P.ult 413 ------------------------------------------ 412
S.par 284 ------------------------------------------ 283
T.tra 441 NVAAAIGMTSTDIDRFVVRFEKTLAAWRKAH----------- 471
cons 463 504
SecS 477 EDVDIEEMALKLDNVLLDTYQDASS 501
SecSAAT 100 ------------------------D 100
A.tai 113 ------------------------L 113
B.hom 324 ------------------------L 324
C.mer 463 ----------------------GTR 465
C.owc 342 ------------------------M 342
E.sil 401 ---------------------ERAE 404
H.ara 295 ------------------------R 295
N.gru 452 ------------------------K 452
P.pal 427 ------------------------L 427
P.tri 400 ---------------------RRRA 403
P.ult 413 ------------------------V 413
S.par 284 ---------------------PRSI 287
T.tra 472 ---------------------ASPS 475
cons 505 529