TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= TR.Phytophthora_sojae.1 located on gi|113926705|gb|AAQY01000043.1|:subseq(83956,3493)strand - positions 3478,2000 (498 letters) Database: P.ultimum/genome.fa 82 sequences; 42,801,618 total letters Searching.................................................................................done Score E Sequences producing significant alignments: (bits) Value gb|GL376634.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 832 0.0 gb|GL376632.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 251 1e-66 gb|GL376566.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 161 2e-39 gb|GL376629.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 150 3e-36 gb|GL376611.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 48 2e-05 gb|GL376565.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 43 8e-04 gb|GL376573.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 42 0.001 gb|GL376607.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 32 1.1 gb|GL376564.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 31 2.5 gb|GL376596.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 30 5.7 gb|GL376620.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 29 9.7 gb|GL376577.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 29 9.7 >gb|GL376634.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875582037, whole genome shotgun sequence Length = 1414051 Score = 832 bits (2148), Expect = 0.0 Identities = 402/498 (80%), Positives = 439/498 (88%) Frame = -3 Query: 1 DEAETSYDYDLVVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWGLGGTCVNVGC 60 D +YDYDLVVIGGGSGGLACSKEAA +G+KVCVLDYVKPS GTSWGLGGTCVNVGC Sbjct: 1305455 DADAVTYDYDLVVIGGGSGGLACSKEAAKYGKKVCVLDYVKPSLVGTSWGLGGTCVNVGC 1305276 Query: 61 IPKKLMHQSSLIGELMHHDSANFGWNIASADGSASTFSWKQLVANVDGYIRGINFKYKVE 120 IPKKLMHQSSLIGE +H DS FGW + TF W Q++ +V+ YI+ INFKYKVE Sbjct: 1305275 IPKKLMHQSSLIGETIHKDSKAFGWTVGE-----QTFDWAQMLKSVNSYIKSINFKYKVE 1305111 Query: 121 LRSKYVKYENFLGSFVDAHTLELWHPRKGTKQITTRDVVIAVGGRPKELTCPGGEHAISS 180 LR K VKYEN LGSF+DAHTLELWHP+KGTK +TTRDVVIAVGGRPK L C GG+ AISS Sbjct: 1305110 LRDKKVKYENLLGSFIDAHTLELWHPKKGTKTVTTRDVVIAVGGRPKPLACEGGDLAISS 1304931 Query: 181 DDIFWMKKKEPGKTLVVGASYVALECAGFLKGMGYDVKVMVRSILLRGFDQDMANKIGEY 240 DDIFW +K+ PGKTLVVGASYVALECAGF+KGMGYDVK+MVRSILLRGFDQDMA+KIGE+ Sbjct: 1304930 DDIFW-RKEAPGKTLVVGASYVALECAGFMKGMGYDVKIMVRSILLRGFDQDMADKIGEF 1304754 Query: 241 MEVQSGIEFIRKTVPQSITKLENGQLLVKWTTEDGESCEEAFDTVLNATGRDPDVAKLGL 300 MEV+S IEFIR VPQSI KLENGQLLVKWTT DGE+CEEAFDTVLNATGRDPDVAKLGL Sbjct: 1304753 MEVESKIEFIRGCVPQSIMKLENGQLLVKWTTADGEACEEAFDTVLNATGRDPDVAKLGL 1304574 Query: 301 DKARVKLNEKTGRIWVKNEQTSTPNIYAIGDVIDAPELTPVAIQAGRLLSRRLYNNSTAQ 360 DKA VKLN KTGRIWV+NEQTSTPN+YAIGDVIDAPELTPVAIQAGRLL+RRLYNN T Sbjct: 1304573 DKAGVKLNPKTGRIWVENEQTSTPNVYAIGDVIDAPELTPVAIQAGRLLARRLYNNETTL 1304394 Query: 361 MDYDKICTAVFTPIEYGCCGLSEEDSKERYGEDNIEVYHKNFVPLEWSLSEETRTAAESC 420 MDYDK+CTAVFTPIEYGCCGLSEE S E++GEDN+E+YH+NF PLEWSLS TR AA SC Sbjct: 1304393 MDYDKVCTAVFTPIEYGCCGLSEEASIEKFGEDNLEIYHQNFTPLEWSLSSATRPAASSC 1304214 Query: 421 YLKVICDKTRDKFVVGFHYLGPNAGEVTQAMGLAMKLGFTYDQMVDTVGIHPTTAETFTT 480 Y+KVICDK+RDK+VVGFHYLGPNAGEVTQAMGLAMKLGFTYDQMV+ VGIHPTTAE FTT Sbjct: 1304213 YVKVICDKSRDKYVVGFHYLGPNAGEVTQAMGLAMKLGFTYDQMVNVVGIHPTTAEIFTT 1304034 Query: 481 LEITKSSGGTTTGGGCUG 498 LE+TKSSG + GGC G Sbjct: 1304033 LEVTKSSGASAAAGGC*G 1303980 >gb|GL376632.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875582035, whole genome shotgun sequence Length = 696189 Score = 251 bits (641), Expect = 1e-66 Identities = 169/485 (34%), Positives = 251/485 (51%), Gaps = 6/485 (1%) Frame = +1 Query: 3 AETSYDYDLVVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIP 62 A+T YDY + IGGGSGG+A ++ AA++G KV V V+ + GLGGTCVN GC+P Sbjct: 427324 ADTVYDY--IAIGGGSGGMASARRAATYGAKVLV---VERGRKYDGAGLGGTCVNYGCVP 427488 Query: 63 KKLMHQSSLIGELMHHDSANFGWNIASADGSASTFSWKQLVANVDGYIRGINFKYKVELR 122 KK+M ++ E +H + A++ + F WK + D YI +N Y+ L Sbjct: 427489 KKVMFNAASHVEHLHRN-ADYSITTTTKPFEFGDFDWKNMKTKRDAYIARLNGIYERNLG 427665 Query: 123 SKYVKYENFLGSFVDAHTLELWHPRKGTKQITTRDVVIAVGGRPKELTCPGGEHAISSDD 182 + + + V +E+ T + +++AVGG P PG EH I SDD Sbjct: 427666 NAQIDLVEGVAKLVAKDKVEV-----DGVVYTGKHILVAVGGVPSLPPIPGIEHVIDSDD 427830 Query: 183 IFWMKKKEPGKTLVVGASYVALECAGFLKGMGYDVKVMVR-SILLRGFD---QDMANKIG 238 F +++ +P K VVGA Y+A+E AG + D + R +LR FD +D+ N+ G Sbjct: 427831 FFKLEE-QPKKVAVVGAGYIAIEIAGIFNALKSDTSLFCRFDHVLRTFDPIVRDLINEEG 428007 Query: 239 EYMEVQSGIEFIRKTVPQSITKLENGQLLVKWTTEDGESCEEAFDTVLNATGRDPDVAKL 298 E ++GI F+R + + I K +G L + E F+ +L A GR+P L Sbjct: 428008 E----KAGINFVRNSRIERIDKQADGTLQITAKVNGEEQVIGGFNQILYAIGREPRTKDL 428175 Query: 299 GLDKARVKLNEKTGRIWVKNEQTSTPNIYAIGDVIDAP-ELTPVAIQAGRLLSRRLYNNS 357 GL++ VKLNEK + E TS IYAIGD ELTPVAI AGR LS RL+ Sbjct: 428176 GLEEVGVKLNEKGFIVVDAQENTSVSGIYAIGDATTTGWELTPVAIAAGRRLSDRLFGGE 428355 Query: 358 -TAQMDYDKICTAVFTPIEYGCCGLSEEDSKERYGEDNIEVYHKNFVPLEWSLSEETRTA 416 A + Y +I T VF+ G G +E ++ E++G +N++ Y FV L +++++ Sbjct: 428356 PNACLHYHQIPTVVFSHPPLGTIGYTEPEAIEKFGAENVKTYSSKFVNLLYAMADPDHKG 428535 Query: 417 AESCYLKVICDKTRDKFVVGFHYLGPNAGEVTQAMGLAMKLGFTYDQMVDTVGIHPTTAE 476 + L + + D+ VVG H G A E+ Q G+A+K+ T + V IHPT AE Sbjct: 428536 KTAMKLVTVGE---DEVVVGIHVAGEGADEMIQGFGVAVKMNATKADFDNIVAIHPTAAE 428706 Query: 477 TFTTL 481 T+ Sbjct: 428707 ELVTM 428721 >gb|GL376566.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875581352, whole genome shotgun sequence Length = 165876 Score = 161 bits (407), Expect = 2e-39 Identities = 121/377 (32%), Positives = 182/377 (48%), Gaps = 32/377 (8%) Frame = -1 Query: 151 KQITTRDVVIAVGGRPKELTCPGGEHAISSDDIFWMKKKEPGKTLVVGASYVALECAGFL 210 K++ ++++IAVGG+P PG EH I SD F ++ P K VVGA Y+A+E AG L Sbjct: 133809 KEVKAKNILIAVGGKPLIPDIPGKEHCIDSDGFFELEVL-PKKVAVVGAGYIAVELAGVL 133633 Query: 211 KGMGYDVKVMVRSI-LLRGFDQD---------------------MANKIGEYMEVQSGIE 248 G+G D + R +LR FD M + + + + + Sbjct: 133632 NGLGSDTTIFCRKHGVLRTFDVSRSVLLDVHLTLMYPALNLSIFM*DSVRDMLHDAMAKD 133453 Query: 249 FIRKTVPQSITKLENGQLLVKWTTEDGESCEEAFDTVLNATGRDPDVAKLGLDKARVKLN 308 I ++ ++E K S FDT++ A GR P + L L A +K Sbjct: 133452 GITLRANSNVARVELAADGTKTLALQDGSEHTGFDTIIYAAGRVPLTSSLNLSAAGIK-T 133276 Query: 309 EKTGRIWVKNEQ-TSTPNIYAIGDVIDAPELTPVAIQAGRLLSRRLYN---NSTAQMDYD 364 + G I V Q TS N++A+GDV LTPVAI AGR LS RL+ ++ A++ YD Sbjct: 133275 DSHGFIKVDAYQATSKSNVFAVGDVCGTTALTPVAIAAGRRLSDRLFGGERHADAKISYD 133096 Query: 365 KICTAVFTPIEYGCCGLSEEDSKERYGEDNIEVYHKNFVPLEWSLSEETRTAAESCY--- 421 I T VF+ G GL+E +++++YG+ I+ Y FV + + L E ++ Sbjct: 133095 NIPTVVFSHPPIGTIGLTEIEARKKYGDAAIKTYTSRFVNMYYGLVNEVADDGKAAKPKP 132916 Query: 422 ---LKVICDKTRDKFVVGFHYLGPNAGEVTQAMGLAMKLGFTYDQMVDTVGIHPTTAETF 478 +K++C +K VVG H +G A E+ Q G+A+K+G T + + IHPT AE Sbjct: 132915 MTAMKLVCLGDDEK-VVGLHIIGMAADEMLQGFGVAVKMGATKADFDNCIAIHPTGAEEL 132739 Query: 479 TTLEITKSSGGTTTGGG 495 T+ S TT G Sbjct: 132738 VTMAPWGLSSQ*TTMSG 132688 Score = 80.5 bits (197), Expect = 4e-15 Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 19/182 (10%) Frame = -2 Query: 8 DYDLVVIGGGSGGLACSKEAASF-GQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIPKKLM 66 +YD +VIG GSGG+A S+ AAS+ +V V++ + LGGTCVNVGC+PKK+M Sbjct: 134291 EYDYLVIGAGSGGMASSRRAASYPNTRVAVVEKAR---------LGGTCVNVGCVPKKIM 134139 Query: 67 HQSSLIGELMHHDSANFGWNIASAD--GSASTFSWKQLVANVDGYIRGINFKYKVELRSK 124 + ++ + ++H D+ ++G+ G +F W +L D Y+ +N Y+ + Sbjct: 134138 YLAADMNHMLHRDAFHYGFETQDGKRIGENVSFHWNKLKERRDAYVLRLNGIYE-----R 133974 Query: 125 YVKYENFLGS-----------FVDAHTLELWHPR-----KGTKQITTRDVVIAVGGRPKE 168 Y + L S V+ E W R K ++T R ++ ++G R + Sbjct: 133973 YAPHVAILSS*IVATVAV*RVVVECMRTETWRTRRWICCKVLPRLTRRAMLKSMGRRSRP 133794 Query: 169 LT 170 T Sbjct: 133793 RT 133788 >gb|GL376629.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875582032, whole genome shotgun sequence Length = 863081 Score = 150 bits (379), Expect = 3e-36 Identities = 142/487 (29%), Positives = 221/487 (45%), Gaps = 14/487 (2%) Frame = +3 Query: 6 SYDYDLVVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIPKKL 65 S DYD+VVIGGG GG + +AA G K ++ +GT LGGTC+NVGCIP K Sbjct: 652233 SSDYDVVVIGGGPGGYVAAIKAAQLGLKTACIE-----SRGT---LGGTCLNVGCIPSKA 652388 Query: 66 MHQSSLIGELMHHDSANFGWNIASADGSASTFSWKQLVANVDGYIRGINFKYKVELRSKY 125 + S+ + HD + +G + S + + +L+ + D ++ + + + Sbjct: 652389 LLHSTHLYHSAQHDFSKYGIEV-----SGVSMDFGKLMKSKDKAVKTLTGGIEQLFKKNK 652553 Query: 126 VKYENFLGSFVDAHTLELWHPRKGTKQITTRDVVIAVGGR-----PKELTCPGGEHAISS 180 V Y G V + + + G + ++ ++++IA G P + G+ S+ Sbjct: 652554 VTYIKGHGKIVAKNEIAVTLNDSGNQTVSAKNILIATGSEVTPLPPVPVDNAAGKIVDST 652733 Query: 181 DDIFWMKKKEPGKTLVVGASYVALECAGFLKGMGYDVKVMVRSILLR---GFDQDMANKI 237 + KK P +V+GA + LE K +G KV V L R G D ++ + Sbjct: 652734 GAL--ELKKVPEHLVVIGAGVIGLELGSVYKRLG--AKVTVVEYLDRVCPGLDLELGKEF 652901 Query: 238 GEYMEVQS-GIEFIRKTVPQSITKLENGQLLVKWTTE---DGESCEEAFDTVLNATGRDP 293 + ++ Q G EF K + +K++ + V TTE G + D VL ATGR P Sbjct: 652902 TKLLKKQGLGFEFSTKV---TASKVDGDK--VTLTTEPAAGGAASTIECDAVLVATGRRP 653066 Query: 294 DVAKLGLDKARVKLNEKTGRIWV-KNEQTSTPNIYAIGDVIDAPELTPVAIQAGRLLSRR 352 LGL+ ++ +K GRI V ++ +T PNI+AIGDVI P L A + G + Sbjct: 653067 FTGGLGLENMGIQ-TDKFGRIQVDEHFRTQIPNIFAIGDVIAGPMLAHKAEEEG-IACVE 653240 Query: 353 LYNNSTAQMDYDKICTAVFTPIEYGCCGLSEEDSKERYGEDNIEVYHKNFVPLEWSLSEE 412 ++Y+ I ++T E G +EE KE E N + Sbjct: 653241 TIAGKHGHVNYNAIPGVIYTFPEVASVGKTEEQLKE-------EGVAYNVGKFPMLANSR 653399 Query: 413 TRTAAESCYL-KVICDKTRDKFVVGFHYLGPNAGEVTQAMGLAMKLGFTYDQMVDTVGIH 471 R E+ L KVI DK DK ++G H + NAGE+ L M+ G + + T H Sbjct: 653400 ARAVGEADGLVKVIADKATDK-ILGVHIIASNAGEMISEGVLGMEYGAASEDIARTCHAH 653576 Query: 472 PTTAETF 478 PT +E F Sbjct: 653577 PTLSEAF 653597 >gb|GL376611.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875582014, whole genome shotgun sequence Length = 494327 Score = 48.1 bits (113), Expect = 2e-05 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +3 Query: 8 DYDLVVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIPKKLMH 67 DYDLVVIG G C+ E+A G++V ++D +GG CV+ G IP K Sbjct: 329151 DYDLVVIGSGPSATQCAIESAKQGKRVAIVD--------KKTSVGGVCVHTGTIPSKTFR 329306 Query: 68 QSSL-IGELMHH 78 ++ L + HH Sbjct: 329307 EAVLHLSGYRHH 329342 Score = 47.0 bits (110), Expect = 4e-05 Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 8/175 (4%) Frame = +2 Query: 327 YAIGDVIDAPELTPVAIQAGRLLSRRLYNNS----TAQMDYDKICTAVFTPIEYGCCGLS 382 YA+GD I AP L +++ GRL + +++ T+Q++ ++T E G + Sbjct: 330518 YAVGDCIGAPSLASTSMEQGRLAACHMWDQEEQLVTSQLENGNYPYGIYTIPEISMVGKT 330697 Query: 383 EED-SKERYGEDNIEVYHKNFVPLEWSLSEETRTAAESCYLKVICDKTRDKFVVGFHYLG 441 E+ +KE N E+ + L + + LK++ D T K + G H +G Sbjct: 330698 EQQLTKEGV---NFEIGIAKYSEL---AKGQMSGSTAGGMLKILFDPTTLK-LFGVHAIG 330856 Query: 442 PNAGEVTQAMGLAMKLGFTYDQMVDTVGIHPTTAETFTTLEIT---KSSGGTTTG 493 A E+ +A+ +G + D V +PT AE + + + S G TG Sbjct: 330857 EGATEIIHIGQVAIAMGCSVTYFRDAVFNYPTLAEAYRVAALNGLGRLSRGMDTG 331021 >gb|GL376565.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875581314, whole genome shotgun sequence Length = 162732 Score = 42.7 bits (99), Expect = 8e-04 Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 8/164 (4%) Frame = -2 Query: 158 VVIAVGGRPKELTCPGGEHAISSDDIFWMKKKEP-GKTL-VVGASYVALECAGFLKGMGY 215 VVIA G P++L PGG+H+ I +K K P GK + V+GA + + + FL +G Sbjct: 48923 VVIATGVLPRDLKIPGGDHSKVLSYIDVLKHKAPVGKRVAVIGAGGIGFDVSEFLTHIGK 48744 Query: 216 DVKVMVRSILLRGFDQDMANKIGEYMEVQSGIEFIRKTVPQSITKLENGQLLVKWTTEDG 275 + V ++ + + D +N V+ G++ +++ VP ++ L+ + +T+ G Sbjct: 48743 SASLDV-NLFAKEWGIDTSN------SVRGGVQGVKQEVPAPEREV---YLMQRKSTKHG 48594 Query: 276 ESCEEAFDTVLNATGRDPDVAKLG------LDKARVKLNEKTGR 313 + + + + + DV +G +D A + +K G+ Sbjct: 48593 KDLGKTTGWIHRLSLKHRDVKMIGGVNYDKVDDAGLHYTDKEGK 48462 >gb|GL376573.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875581402, whole genome shotgun sequence Length = 979788 Score = 42.4 bits (98), Expect = 0.001 Identities = 21/64 (32%), Positives = 33/64 (51%) Frame = +3 Query: 2 EAETSYDYDLVVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWGLGGTCVNVGCI 61 E + S +DL+VIG G G C+ ++A G+ V ++D GG CV+ G + Sbjct: 621240 ELKASEHFDLIVIGSGPAGQKCAIDSAKHGKSVAIIDKRDMH--------GGVCVHTGTV 621395 Query: 62 PKKL 65 P K+ Sbjct: 621396 PSKV 621407 Score = 36.2 bits (82), Expect = 0.079 Identities = 42/165 (25%), Positives = 66/165 (40%), Gaps = 13/165 (7%) Frame = +3 Query: 327 YAIGDVIDAPELTPVAIQAGRLLSRRLYNNSTAQMDYDKICTA---VFTPIEYGCC---G 380 YA GD I P L +++ GRL S + D T + T + G G Sbjct: 622509 YAAGDCIGFPALASTSMEQGRLASVHMRTEKPTNKTGDSESTDPQFMRTRMRSGDVFPFG 622688 Query: 381 LSEEDSKERYGEDNIEVYHKNFVPLEWSLSEETRTAAESC------YLKVI-CDKTRDKF 433 + G++ ++ +N VP E L+ A +LK+I C KT Sbjct: 622689 IYTVPEISMVGKNEQQLTKEN-VPYEVGLARYEELAKGQMLGGVPGFLKIIFCPKTLQ-- 622859 Query: 434 VVGFHYLGPNAGEVTQAMGLAMKLGFTYDQMVDTVGIHPTTAETF 478 ++G H +G A E+ + M G T + + V +PT AE + Sbjct: 622860 LLGVHAIGEGATEIIHIGQVVMSTGGTIEYFRNAVFNYPTLAEAY 622994 >gb|GL376607.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875582010, whole genome shotgun sequence Length = 314107 Score = 32.3 bits (72), Expect = 1.1 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 1/89 (1%) Frame = -3 Query: 408 SLSEETRTAAESCYLKVICDKTRDKFVVGFHYLGPNA-GEVTQAMGLAMKLGFTYDQMVD 466 SL + + ES +K+IC T + H L + V AM ++ + + Sbjct: 183458 SLLDPPPPSRESWMVKLICSATHKQLTSKHHLLLRSLYSRVPSAMSASLIVSMILSGLCP 183279 Query: 467 TVGIHPTTAETFTTLEITKSSGGTTTGGG 495 + +PT+A + +T +SG GGG Sbjct: 183278 DLAANPTSASAKSESSLTGTSGSWRNGGG 183192 >gb|GL376564.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875581313, whole genome shotgun sequence Length = 1115623 Score = 31.2 bits (69), Expect = 2.5 Identities = 16/53 (30%), Positives = 24/53 (45%) Frame = +2 Query: 7 YDYDLVVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWGLGGTCVNVG 59 ++YD VV+G G GL + A G K + + P+ T GG +G Sbjct: 283688 HEYDAVVVGAGGAGLRAAMGCAEAGLKTACISKLFPTRSHTVAAQGGINAALG 283846 >gb|GL376596.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875581981, whole genome shotgun sequence Length = 580909 Score = 30.0 bits (66), Expect = 5.7 Identities = 11/30 (36%), Positives = 21/30 (70%) Frame = -2 Query: 9 YDLVVIGGGSGGLACSKEAASFGQKVCVLD 38 +D+++IGGG+ G C+ +AA+ G V++ Sbjct: 468891 FDVLIIGGGATGSGCALDAATRGLNTAVVE 468802 >gb|GL376620.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875582023, whole genome shotgun sequence Length = 1683196 Score = 29.3 bits (64), Expect = 9.7 Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 8/98 (8%) Frame = +3 Query: 400 KNFVPLEWSLSEETRTAAESCYLKVICDKTRDKFVVGFHYLG--------PNAGEVTQAM 451 KN+VP+ ++ R ++KVI D F G G PN G + Sbjct: 421479 KNYVPVHQTMQLSDRQTVTGAWIKVI----NDLFYQGTRMFGVRLRQWRSPNTGTIDYTK 421646 Query: 452 GLAMKLGFTYDQMVDTVGIHPTTAETFTTLEITKSSGG 489 + + +D D + P ET T +E+ +++GG Sbjct: 421647 SIVTRQMMVFDD-DDASELLP---ETPTDVEVVRTTGG 421748 >gb|GL376577.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875581463, whole genome shotgun sequence Length = 305633 Score = 29.3 bits (64), Expect = 9.7 Identities = 17/35 (48%), Positives = 22/35 (62%) Frame = +2 Query: 343 IQAGRLLSRRLYNNSTAQMDYDKICTAVFTPIEYG 377 I+ RLL RL+ N AQ DY +IC ++ T EYG Sbjct: 128603 IKISRLLKDRLHCNVAAQTDYLQIC-SLCTGREYG 128704 Database: P.ultimum/genome.fa Posted date: Feb 9, 2011 9:02 AM Number of letters in database: 42,801,618 Number of sequences in database: 82 Lambda K H 0.317 0.135 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,391,423 Number of Sequences: 82 Number of extensions: 420402 Number of successful extensions: 1930 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 1790 Number of HSP's gapped (non-prelim): 343 length of query: 498 length of database: 14,267,206 effective HSP length: 106 effective length of query: 392 effective length of database: 14,258,514 effective search space: 5589337488 effective search space used: 5589337488 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 64 (29.3 bits)