TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= TR.Phytophthora_sojae.1 located on gi|113926705|gb|AAQY01000043.1|:subseq(83956,3493)strand - positions 3478,2000 (498 letters) Database: E.siliculosus/genome.fa 35 sequences; 195,934,119 total letters Searching...................................done Score E Sequences producing significant alignments: (bits) Value emb|FN649740.1| Ectocarpus siliculosus strain Ec 32, whole genom... 114 1e-24 emb|FN649749.1| Ectocarpus siliculosus strain Ec 32, whole genom... 79 4e-14 emb|FN649751.1| Ectocarpus siliculosus strain Ec 32, whole genom... 52 5e-06 emb|FN649726.1| Ectocarpus siliculosus strain Ec 32, whole genom... 51 1e-05 emb|FN649760.1| Ectocarpus siliculosus strain Ec 32, whole genom... 49 7e-05 emb|FN649750.1| Ectocarpus siliculosus strain Ec 32, whole genom... 43 0.003 emb|FN649748.1| Ectocarpus siliculosus strain Ec 32, whole genom... 37 0.27 emb|FN649736.1| Ectocarpus siliculosus strain Ec 32, whole genom... 35 0.78 emb|FN649729.1| Ectocarpus siliculosus strain Ec 32, whole genom... 35 1.0 emb|FN649727.1| Ectocarpus siliculosus strain Ec 32, whole genom... 32 5.1 emb|FN649741.1| Ectocarpus siliculosus strain Ec 32, whole genom... 32 6.6 >emb|FN649740.1| Ectocarpus siliculosus strain Ec 32, whole genome shotgun sequence assembly, chromosome LG15 Length = 5788546 Score = 114 bits (284), Expect = 1e-24 Identities = 51/64 (79%), Positives = 56/64 (87%) Frame = +3 Query: 5 TSYDYDLVVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIPKK 64 + YDYDLVVIGGGSGGLAC+KEAA G+KV LD+VKPS G+ WGLGGTCVNVGCIPKK Sbjct: 911844 SEYDYDLVVIGGGSGGLACAKEAARLGKKVACLDFVKPSVMGSKWGLGGTCVNVGCIPKK 912023 Query: 65 LMHQ 68 LMHQ Sbjct: 912024 LMHQ 912035 Score = 74.3 bits (181), Expect = 1e-12 Identities = 37/51 (72%), Positives = 43/51 (84%) Frame = +3 Query: 158 VVIAVGGRPKELTCPGGEHAISSDDIFWMKKKEPGKTLVVGASYVALECAG 208 VV+AVGGRP +L C GGE A++SDDIF + + PGKTLVVGASYVALECAG Sbjct: 913890 VVVAVGGRPNQLPCEGGELAMTSDDIFAL-RTPPGKTLVVGASYVALECAG 914039 Score = 62.8 bits (151), Expect = 4e-09 Identities = 31/50 (62%), Positives = 37/50 (74%) Frame = +1 Query: 207 AGFLKGMGYDVKVMVRSILLRGFDQDMANKIGEYMEVQSGIEFIRKTVPQ 256 AGFL G+G D VMVRSILLRGFDQ +A +IG +ME + G F+R VPQ Sbjct: 914500 AGFLTGLGVDTTVMVRSILLRGFDQGIAERIGSFMEAE-GTRFLRPAVPQ 914646 Score = 48.5 bits (114), Expect = 7e-05 Identities = 21/45 (46%), Positives = 33/45 (73%), Gaps = 1/45 (2%) Frame = +3 Query: 317 KNEQTSTPNIYAIGDVIDA-PELTPVAIQAGRLLSRRLYNNSTAQ 360 +NE+T+ ++ IGD ++ PELTP A+QAGRLL+ RL+ +A+ Sbjct: 916560 RNEETTVAGVFGIGDAVEGVPELTPSAVQAGRLLAMRLFGGESAK 916694 Score = 44.7 bits (104), Expect = 0.001 Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 23/134 (17%) Frame = +2 Query: 18 SGGLACSKEAASFGQKVCVLDY---VKPSPQGTSWGLGGTCVNVGCIPKKLMHQSSLIGE 74 SG + S + FG C + + + S+ L CV C + ++ Sbjct: 912116 SGVVLVSSDRVVFGSSCCYVAFH*HERTHALWLSFALRRVCVADVCTCTQTLNADKNQAA 912295 Query: 75 LMH---HDSANFGW----------------NIASADGSAS-TFSWKQLVANVDGYIRGIN 114 L+ D+ FGW +A +G S T W+ +V V YI+G+N Sbjct: 912296 LLAGHAKDAPFFGWPAGPEGEDGSRLEEAGGVAGGEGKRSVTHDWEVMVQGVQNYIKGLN 912475 Query: 115 FKYKVELRSKYVKY 128 FKY+ +LRSK V + Sbjct: 912476 FKYRTDLRSKGVSH 912517 Score = 42.4 bits (98), Expect = 0.005 Identities = 19/40 (47%), Positives = 25/40 (62%) Frame = +3 Query: 446 EVTQAMGLAMKLGFTYDQMVDTVGIHPTTAETFTTLEITK 485 +V Q G+ ++LG T D + VGIHPT AE T L+ TK Sbjct: 920826 KVMQGFGVGIRLGMTMDDLRQLVGIHPTVAEELTLLQTTK 920945 Score = 41.6 bits (96), Expect = 0.008 Identities = 17/35 (48%), Positives = 24/35 (68%) Frame = +1 Query: 391 GEDNIEVYHKNFVPLEWSLSEETRTAAESCYLKVI 425 GE+N+EV+H F PLEW ++ E +CY+KVI Sbjct: 917800 GEENVEVFHSAFTPLEWQMNSE--RPQNACYVKVI 917898 Score = 38.9 bits (89), Expect = 0.054 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 4/60 (6%) Frame = +2 Query: 336 PELTPVAIQAGRLLSRRLYN----NSTAQMDYDKICTAVFTPIEYGCCGLSEEDSKERYG 391 P TPVA++ + +N S + MDY +CT VFTP+ G G SE D+ + G Sbjct: 917423 PSPTPVAVRVLDVYCCPFHNFFVPGSASAMDYSNVCTTVFTPLG*GGWGFSEGDAIKTMG 917602 Score = 38.1 bits (87), Expect = 0.093 Identities = 15/27 (55%), Positives = 21/27 (77%) Frame = +2 Query: 422 LKVICDKTRDKFVVGFHYLGPNAGEVT 448 ++ +CD T + VVG H+LGPNAGEV+ Sbjct: 920420 VQAVCDLTDSQRVVGLHFLGPNAGEVS 920500 >emb|FN649749.1| Ectocarpus siliculosus strain Ec 32, whole genome shotgun sequence assembly, chromosome LG24 Length = 3847105 Score = 79.3 bits (194), Expect = 4e-14 Identities = 36/66 (54%), Positives = 50/66 (75%), Gaps = 2/66 (3%) Frame = -2 Query: 32 QKVCVLDYVKPSPQGTSWGLGGTCVNVGCIPKKLMHQSSLIGELMH--HDSANFGWNIAS 89 +KV + D+VKPSPQGT WGLGGTCVNVGC+PKKLMH + L+GE + +++ + G + + Sbjct: 2944062 KKVVLFDFVKPSPQGTKWGLGGTCVNVGCVPKKLMHYAGLLGEGTYSMYNNGSAGTRLMA 2943883 Query: 90 ADGSAS 95 + G AS Sbjct: 2943882 S*GVAS 2943865 Score = 72.8 bits (177), Expect = 3e-12 Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 2/66 (3%) Frame = -2 Query: 158 VVIAVGGRPK-ELTCPGG-EHAISSDDIFWMKKKEPGKTLVVGASYVALECAGFLKGMGY 215 V+IAVGGRP PG EHA++SDD+F ++ PGKTLVVGASY+ALECAGF++ +G Sbjct: 2941776 VIIAVGGRPVIPDDVPGAREHALTSDDLFSLRTS-PGKTLVVGASYIALECAGFMRELGL 2941600 Query: 216 DVKVMV 221 DV V V Sbjct: 2941599 DVTVRV 2941582 Score = 50.4 bits (119), Expect = 2e-05 Identities = 22/29 (75%), Positives = 27/29 (93%) Frame = -3 Query: 6 SYDYDLVVIGGGSGGLACSKEAASFGQKV 34 SYDYDL VIGGGSGG+A +K+AAS+G+KV Sbjct: 2944469 SYDYDLAVIGGGSGGMAVAKKAASYGKKV 2944383 Score = 49.7 bits (117), Expect = 3e-05 Identities = 25/53 (47%), Positives = 36/53 (67%) Frame = -3 Query: 217 VKVMVRSILLRGFDQDMANKIGEYMEVQSGIEFIRKTVPQSITKLENGQLLVK 269 ++V VRSILLRGFDQ +A K+G+ M+ G++F+R VP I K+ Q V+ Sbjct: 2941064 MQVAVRSILLRGFDQQVAEKLGDVMK-DLGVKFVRPAVPSKIEKVRAPQFAVQ 2940909 Score = 48.1 bits (113), Expect = 9e-05 Identities = 21/36 (58%), Positives = 26/36 (72%) Frame = -2 Query: 374 IEYGCCGLSEEDSKERYGEDNIEVYHKNFVPLEWSL 409 +EYGCCGLSEED+ YGED++E Y F LE S+ Sbjct: 2939367 VEYGCCGLSEEDAIRLYGEDDVETYLFGFGTLEQSV 2939260 Score = 48.1 bits (113), Expect = 9e-05 Identities = 20/50 (40%), Positives = 31/50 (62%) Frame = -2 Query: 434 VVGFHYLGPNAGEVTQAMGLAMKLGFTYDQMVDTVGIHPTTAETFTTLEI 483 V+GFH++GPNAGE+TQ GLA++LG V +H +F+ + + Sbjct: 2937258 VIGFHFVGPNAGEITQGFGLAVRLGAKKSDFNKLVSMHSLPRASFSVVTL 2937109 Score = 43.5 bits (101), Expect = 0.002 Identities = 19/32 (59%), Positives = 24/32 (75%) Frame = -2 Query: 344 QAGRLLSRRLYNNSTAQMDYDKICTAVFTPIE 375 QAG LL+ RLY +T QMDY + TAVFTP++ Sbjct: 2939787 QAGELLASRLYARATEQMDYSLVATAVFTPVK 2939692 Score = 38.5 bits (88), Expect = 0.071 Identities = 22/79 (27%), Positives = 39/79 (49%) Frame = -1 Query: 48 SWGLGGTCVNVGCIPKKLMHQSSLIGELMHHDSANFGWNIASADGSASTFSWKQLVANVD 107 S L T ++ GC+ L +I HD+ FGW + + + W+ +V V Sbjct: 2943664 SLALRHTRLSWGCVGDSL----GVITGAGMHDAKAFGWKVGNPE-----HDWEAMVETVQ 2943512 Query: 108 GYIRGINFKYKVELRSKYV 126 +++ +NF+Y+V L+S V Sbjct: 2943511 NHVKMLNFRYRVGLKSAQV 2943455 Score = 37.4 bits (85), Expect = 0.16 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 11/49 (22%) Frame = -3 Query: 312 GRIWVKNEQTSTPNIYAIGDVIDA-----------PELTPVAIQAGRLL 349 G+I V+NEQT+ +I+AIGD PELTPVA+Q +L Sbjct: 2940116 GKIPVENEQTNVEHIFAIGDCTSVDVMFHESHWANPELTPVAVQVRSML 2939970 Score = 35.0 bits (79), Expect = 0.78 Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = -3 Query: 468 VGIHPTTAETFTTLEITKSSG-GTTTGGGCUG 498 VGIHP+ AE+F + IT+SSG GGC G Sbjct: 2936750 VGIHPSDAESFCAMGITRSSGVSFVAEGGCGG 2936655 >emb|FN649751.1| Ectocarpus siliculosus strain Ec 32, whole genome shotgun sequence assembly, chromosome LG26 Length = 7107661 Score = 52.4 bits (124), Expect = 5e-06 Identities = 26/68 (38%), Positives = 38/68 (55%) Frame = +2 Query: 3 AETSYDYDLVVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIP 62 A++S YDLV++G G C+ E+A +G+ VC++D S LGG CV+ G IP Sbjct: 5686088 AKSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVD--------KSSQLGGVCVHTGTIP 5686243 Query: 63 KKLMHQSS 70 K + S Sbjct: 5686244 SKTFRRVS 5686267 >emb|FN649726.1| Ectocarpus siliculosus strain Ec 32, whole genome shotgun sequence assembly, chromosome LG01 Length = 3745584 Score = 51.2 bits (121), Expect = 1e-05 Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 24/126 (19%) Frame = -1 Query: 9 YDLVVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIPKKLMH- 67 YD+VV+GGG GG + +++ G K V++ + LGGTC+NVGCIP K+ Sbjct: 2346042 YDVVVVGGGPGGYVAAIKSSQLGLKTAVVE--------SRGKLGGTCLNVGCIPSKVWKV 2345887 Query: 68 --------QSSLIGELMHHDSANFGWNIASADGSASTFS---------------WKQLVA 104 Q S++ D W++ S S WK +A Sbjct: 2345886 TGWHGVSCQFSIVSMFR*FDHDPLFWHLFREVSSYQCRSTAGMQHYCCTWYLCMWKLWIA 2345707 Query: 105 NVDGYI 110 VDG I Sbjct: 2345706 EVDGLI 2345689 Score = 45.8 bits (107), Expect = 4e-04 Identities = 22/55 (40%), Positives = 35/55 (63%) Frame = -1 Query: 422 LKVICDKTRDKFVVGFHYLGPNAGEVTQAMGLAMKLGFTYDQMVDTVGIHPTTAE 476 +K++ DK D+ ++G H LGPNAGE+ + LAM+ G + + + T HPT +E Sbjct: 2341227 VKILSDKETDR-ILGAHILGPNAGEMIAEVVLAMEYGASSEDIARTCHAHPTLSE 2341066 >emb|FN649760.1| Ectocarpus siliculosus strain Ec 32, whole genome shotgun sequence assembly, unassigned sequences LGUn Length = 58155991 Score = 48.5 bits (114), Expect = 7e-05 Identities = 23/48 (47%), Positives = 28/48 (58%) Frame = -1 Query: 434 VVGFHYLGPNAGEVTQAMGLAMKLGFTYDQMVDTVGIHPTTAETFTTL 481 V+G H +G A E+ Q G+AMKLG T V IHPT +E F TL Sbjct: 55096303 VIGLHVIGEGADEMMQGFGVAMKLGATKADFDSCVAIHPTASEEFVTL 55096160 Score = 44.3 bits (103), Expect = 0.001 Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 1/89 (1%) Frame = -2 Query: 183 IFWMKKKEPGKTLVVGASYVALECAGFLKGMGYDVKVMV-RSILLRGFDQDMANKIGEYM 241 ++ + +++P K V+GA Y+A+E AG + +G D ++V R LR FD M + + M Sbjct: 55098777 VYHLPQEQPKKVAVIGAGYIAVELAGVFQSLGTDTTLLVRRDRPLRSFDSLMVDTLMSEM 55098598 Query: 242 EVQSGIEFIRKTVPQSITKLENGQLLVKW 270 +SG+ P + TK+ +G+ V + Sbjct: 55098597 G-KSGL----TVRPHTTTKVNSGEFWVSF 55098526 Score = 44.3 bits (103), Expect = 0.001 Identities = 31/62 (50%), Positives = 38/62 (61%) Frame = -3 Query: 256 QSITKLENGQLLVKWTTEDGESCEEAFDTVLNATGRDPDVAKLGLDKARVKLNEKTGRIW 315 QS+TK +G L + T EDGES FD VL A GR+P + KLGLD A VK + G I Sbjct: 55098038 QSVTKEADGTLTL--TLEDGESLG-GFDQVLVAAGREPILDKLGLDSAGVKTDR--GHIT 55097874 Query: 316 VK 317 V+ Sbjct: 55097873 VR 55097868 Score = 35.0 bits (79), Expect = 0.78 Identities = 20/55 (36%), Positives = 31/55 (56%) Frame = -3 Query: 133 GSFVDAHTLELWHPRKGTKQITTRDVVIAVGGRPKELTCPGGEHAISSDDIFWMK 187 GSFV T+++ +G + T +++AVGGRP T G EH I S+ F ++ Sbjct: 55099268 GSFVGPKTVQV----EGV-EYTADHILVAVGGRPTMPTLEGAEHCIDSNGFFQLE 55099119 >emb|FN649750.1| Ectocarpus siliculosus strain Ec 32, whole genome shotgun sequence assembly, chromosome LG25 Length = 4542878 Score = 43.1 bits (100), Expect = 0.003 Identities = 21/39 (53%), Positives = 26/39 (66%) Frame = -2 Query: 316 VKNEQTSTPNIYAIGDVIDAPELTPVAIQAGRLLSRRLY 354 V + TS +YA+GDV ELTP+AI AGR LS RL+ Sbjct: 4067914 VVGQNTSAEGVYALGDVTGRVELTPMAIAAGRTLSDRLF 4067798 Score = 42.7 bits (99), Expect = 0.004 Identities = 21/55 (38%), Positives = 30/55 (54%) Frame = -2 Query: 351 RRLYNNSTAQMDYDKICTAVFTPIEYGCCGLSEEDSKERYGEDNIEVYHKNFVPL 405 R L+N + DY + T VF+ CGL+E D++ YGED ++VY F L Sbjct: 4067365 RALFNKA----DYTNVPTVVFSHPPMATCGLTEPDARAAYGEDAVKVYQSKFTNL 4067213 Score = 38.9 bits (89), Expect = 0.054 Identities = 16/30 (53%), Positives = 24/30 (80%) Frame = -2 Query: 9 YDLVVIGGGSGGLACSKEAASFGQKVCVLD 38 YD +VIGGGSGG++ ++ AAS G KV +++ Sbjct: 4073977 YDYLVIGGGSGGVSSARRAASHGAKVALIE 4073888 Score = 38.9 bits (89), Expect = 0.054 Identities = 15/24 (62%), Positives = 20/24 (83%) Frame = -3 Query: 52 GGTCVNVGCIPKKLMHQSSLIGEL 75 GGTCVNVGC+PKK+M ++ I E+ Sbjct: 4073367 GGTCVNVGCVPKKVMFNAAHINEV 4073296 Score = 34.3 bits (77), Expect = 1.3 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = -3 Query: 182 DIFWMKKKEPGKTLVVGASYVALECAGFLKGMGYDVKVMVR 222 D F+ ++P K VVGA Y+A+E AG +G + + +R Sbjct: 4070181 DGFFDVTEQPKKVAVVGAGYIAVELAGIFDALGTETHLFIR 4070059 >emb|FN649748.1| Ectocarpus siliculosus strain Ec 32, whole genome shotgun sequence assembly, chromosome LG23 Length = 3983565 Score = 36.6 bits (83), Expect = 0.27 Identities = 14/27 (51%), Positives = 22/27 (81%) Frame = -3 Query: 9 YDLVVIGGGSGGLACSKEAASFGQKVC 35 +D +VIGGGSGG++ ++ AA++ KVC Sbjct: 2475940 FDYLVIGGGSGGVSSARRAATYDAKVC 2475860 Score = 35.0 bits (79), Expect = 0.78 Identities = 20/55 (36%), Positives = 31/55 (56%) Frame = -3 Query: 133 GSFVDAHTLELWHPRKGTKQITTRDVVIAVGGRPKELTCPGGEHAISSDDIFWMK 187 GSFV T+++ +G + T +++AVGGRP T G EH I S+ F ++ Sbjct: 2474542 GSFVGPKTVQV----EGV-EYTADHILVAVGGRPTMPTLEGAEHCIDSNGFFQLE 2474393 Score = 34.7 bits (78), Expect = 1.0 Identities = 12/15 (80%), Positives = 15/15 (100%) Frame = -3 Query: 51 LGGTCVNVGCIPKKL 65 +GGTCVNVGC+PKK+ Sbjct: 2475604 MGGTCVNVGCVPKKV 2475560 >emb|FN649736.1| Ectocarpus siliculosus strain Ec 32, whole genome shotgun sequence assembly, chromosome LG11 Length = 5521395 Score = 35.0 bits (79), Expect = 0.78 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +3 Query: 320 QTSTPNIYAIGDVIDAPELTPVAIQAGRLLSRRLYNNSTAQM 361 +TS P +YAIGDV P L A GR ++ L+N+ ++ Sbjct: 4354455 RTSNPRVYAIGDVTGPPGLASSAQMGGRAVATYLFNDKMQKL 4354580 >emb|FN649729.1| Ectocarpus siliculosus strain Ec 32, whole genome shotgun sequence assembly, chromosome LG04 Length = 5529539 Score = 34.7 bits (78), Expect = 1.0 Identities = 18/54 (33%), Positives = 27/54 (50%) Frame = -3 Query: 12 VVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIPKKL 65 VVIG G+ GL A G+ +++ +GG C+NVGC+P K+ Sbjct: 274449 VVIGSGAAGLLSVIIANGLGKTCALVE---------QHAMGGDCLNVGCVPSKV 274315 Score = 33.1 bits (74), Expect = 3.0 Identities = 16/30 (53%), Positives = 20/30 (66%) Frame = -2 Query: 283 DTVLNATGRDPDVAKLGLDKARVKLNEKTG 312 D +LNATGR P+V +GLD A V N + G Sbjct: 270403 DCLLNATGRVPNVFGVGLDDAGVDYNNRQG 270314 >emb|FN649727.1| Ectocarpus siliculosus strain Ec 32, whole genome shotgun sequence assembly, chromosome LG02 Length = 9289656 Score = 32.3 bits (72), Expect = 5.1 Identities = 24/73 (32%), Positives = 34/73 (46%) Frame = -1 Query: 11 LVVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIPKKLMHQSS 70 + V+GGG G+A + A+FG V V D P GT G G + V G L+H + Sbjct: 4139655 VAVVGGGFAGMAAAYHLAAFGSDVTVFD---PHEAGT--GSGASSVAAG-----LLHPLT 4139506 Query: 71 LIGELMHHDSANF 83 G+L+ F Sbjct: 4139505 PRGKLIWKGEEGF 4139467 Score = 31.6 bits (70), Expect = 8.7 Identities = 17/57 (29%), Positives = 28/57 (49%) Frame = +1 Query: 144 WHPRKGTKQITTRDVVIAVGGRPKELTCPGGEHAISSDDIFWMKKKEPGKTLVVGAS 200 WHPR+ TR ++I++G RP+ H S D I + ++E ++G S Sbjct: 3084778 WHPRRSPPPPRTRRLLISIGARPRPNYLVISRHRPSCDTIRRVHREEILPFFLLGRS 3084948 >emb|FN649741.1| Ectocarpus siliculosus strain Ec 32, whole genome shotgun sequence assembly, chromosome LG16 Length = 8064047 Score = 32.0 bits (71), Expect = 6.6 Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 6/122 (4%) Frame = -1 Query: 343 IQAGRLLSRRLYNNSTAQMDYDKICTAVFTPIEYGCCGLSEEDSKERYGEDNIEVYHKNF 402 +Q GR+L++ + S ++ D+ IC + TP ++ LS + S + N K F Sbjct: 4192937 LQ*GRILTKCRKSKSKSRSDWSNICYLLTTPFDFMEVPLSGKKSPGDFFYQNQNQRGKEF 4192758 Query: 403 -VPLEWSLSEETRTAAESCYLKVICDKTRDKFVVGF-----HYLGPNAGEVTQAMGLAMK 456 WS E AA+ Y C + + HYL P QA+ A Sbjct: 4192757 KTSKAWSTCRE--AAAKQVYDTTCCTLLIEGLSAPYHRDHGHYL*PEDSARRQAIKRAGS 4192584 Query: 457 LG 458 LG Sbjct: 4192583 LG 4192578 Database: E.siliculosus/genome.fa Posted date: Feb 9, 2011 9:02 AM Number of letters in database: 195,934,119 Number of sequences in database: 35 Lambda K H 0.317 0.135 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 131,490,919 Number of Sequences: 35 Number of extensions: 2302974 Number of successful extensions: 12911 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 11358 Number of HSP's gapped (non-prelim): 5909 length of query: 498 length of database: 65,311,373 effective HSP length: 117 effective length of query: 381 effective length of database: 65,307,278 effective search space: 24882072918 effective search space used: 24882072918 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 70 (31.6 bits)