TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= TR.Phytophthora_sojae.1 located on gi|113926705|gb|AAQY01000043.1|:subseq(83956,3493)strand - positions 3478,2000 (498 letters) Database: A.taiwanensis/genome.fa 5379 sequences; 6,149,411 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABJQ01000989.1| Ascogregarina taiwanensis Contig1141, whole g... 53 7e-08 gb|ABJQ01004901.1| Ascogregarina taiwanensis CLRanP104-A09.b1.ab... 47 7e-06 gb|ABJQ01003097.1| Ascogregarina taiwanensis Contig3430, whole g... 28 3.2 gb|ABJQ01002470.1| Ascogregarina taiwanensis Contig2776, whole g... 28 3.2 gb|ABJQ01003177.1| Ascogregarina taiwanensis Contig3511, whole g... 27 5.4 gb|ABJQ01002882.1| Ascogregarina taiwanensis Contig3205, whole g... 27 5.4 gb|ABJQ01002551.1| Ascogregarina taiwanensis Contig2858, whole g... 27 5.4 gb|ABJQ01002788.1| Ascogregarina taiwanensis Contig3107, whole g... 26 9.3 gb|ABJQ01001699.1| Ascogregarina taiwanensis Contig1938, whole g... 26 9.3 >gb|ABJQ01000989.1| Ascogregarina taiwanensis Contig1141, whole genome shotgun sequence Length = 858 Score = 53.1 bits (126), Expect = 7e-08 Identities = 22/45 (48%), Positives = 35/45 (77%) Frame = -2 Query: 416 AAESCYLKVICDKTRDKFVVGFHYLGPNAGEVTQAMGLAMKLGFT 460 A+ +C +K++C K+++ VVGFH +GP+AGE+TQ LA++LG T Sbjct: 857 ASPNCLVKLVCRKSQNLLVVGFHCVGPHAGELTQGYALALQLGAT 723 Score = 38.1 bits (87), Expect = 0.002 Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%) Frame = -2 Query: 466 DTVGIHPTTAETFTTLEITKSSGGT-TTGGGCUG 498 +TVGIHPT AE F + IT++SG + GGC G Sbjct: 512 NTVGIHPTDAEAFHNMTITRASGESWIAAGGCGG 411 >gb|ABJQ01004901.1| Ascogregarina taiwanensis CLRanP104-A09.b1.ab1, whole genome shotgun sequence Length = 775 Score = 46.6 bits (109), Expect = 7e-06 Identities = 35/116 (30%), Positives = 57/116 (49%) Frame = -1 Query: 361 MDYDKICTAVFTPIEYGCCGLSEEDSKERYGEDNIEVYHKNFVPLEWSLSEETRTAAESC 420 ++Y+ I + V+T E G +EE K + IE Y K P + T E Sbjct: 628 VNYEAIPSVVYTHPEVAGVGKTEEQLKA----EGIE-YKKGTFPFAANSRARTNDDFEG- 467 Query: 421 YLKVICDKTRDKFVVGFHYLGPNAGEVTQAMGLAMKLGFTYDQMVDTVGIHPTTAE 476 +KV+ +K+ DK ++G +GP AG++ Q + L M+ G + + + T HP AE Sbjct: 466 NVKVLTEKSTDK-ILGAWIIGPQAGDLIQELVLGMEYGASSEDIARTTHAHPALAE 302 >gb|ABJQ01003097.1| Ascogregarina taiwanensis Contig3430, whole genome shotgun sequence Length = 3026 Score = 27.7 bits (60), Expect = 3.2 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = +1 Query: 15 GGGSGGLACSKEAASFGQKVCVLDYVKP-SPQGTSWGLGGTCVNVGCIPKKLMHQS 69 G SG CS+ A G + L + P SP G S L G + CIP LMH++ Sbjct: 466 GEHSGNQHCSRRADLLGHNL--LGHATPVSPPGNS-NLSG----IACIPPSLMHRA 612 >gb|ABJQ01002470.1| Ascogregarina taiwanensis Contig2776, whole genome shotgun sequence Length = 2219 Score = 27.7 bits (60), Expect = 3.2 Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 8/98 (8%) Frame = -2 Query: 406 EWSLSEETRTAAESCYLKVICDKTRDKFVVGFHYLGPNAGEVTQAMG-LAMKLGFT---- 460 EW +S E R + + +V+ D++ V L + AMG L +G Sbjct: 1240 EWEISVEHRKLVQQLF-EVVFDRSAALSAVAVVALAGRTCRLQPAMGGLTCAIGGALYSK 1064 Query: 461 ---YDQMVDTVGIHPTTAETFTTLEITKSSGGTTTGGG 495 Y + + T AET + +T+ S G T GGG Sbjct: 1063 CEMYQRALKGYLSVVTDAETAKLMHLTEVSDGVTKGGG 950 >gb|ABJQ01003177.1| Ascogregarina taiwanensis Contig3511, whole genome shotgun sequence Length = 2910 Score = 26.9 bits (58), Expect = 5.4 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 10/45 (22%) Frame = -3 Query: 378 CCGLSEEDSKERYGE--------DNIEVYHKNFVP--LEWSLSEE 412 CCG S ++ER+GE D +++ NF+ + WS E Sbjct: 2233 CCGFSRFHNRERFGERPRGSHVNDTVDILVVNFINNIMHWSF*RE 2099 >gb|ABJQ01002882.1| Ascogregarina taiwanensis Contig3205, whole genome shotgun sequence Length = 2418 Score = 26.9 bits (58), Expect = 5.4 Identities = 24/77 (31%), Positives = 30/77 (38%) Frame = -3 Query: 15 GGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIPKKLMHQSSLIGE 74 G SGG C + G L + P G G GG C+ GC L+ S Sbjct: 361 GSNSGG--CCAGSNCGGCCAWSLLRISECPCGCCAGRGGGCLRCGCCESSLLRNS----- 203 Query: 75 LMHHDSANFGWNIASAD 91 + H AN G AS+D Sbjct: 202 MSPHSCAN-GCCYASSD 155 >gb|ABJQ01002551.1| Ascogregarina taiwanensis Contig2858, whole genome shotgun sequence Length = 1904 Score = 26.9 bits (58), Expect = 5.4 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Frame = -3 Query: 40 VKPSPQGTSWGLGGTCVN--VGCIPKKLMHQSSLIGELMHHDSANFGWNIAS 89 V PSPQ G C N V C + QSS I L +H + +G+ AS Sbjct: 1401 VPPSPQH------GHCPNAPVACT*HSQLQQSSSINTLKYHPTLGYGYAQAS 1264 >gb|ABJQ01002788.1| Ascogregarina taiwanensis Contig3107, whole genome shotgun sequence Length = 1635 Score = 26.2 bits (56), Expect = 9.3 Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 13/69 (18%) Frame = +2 Query: 147 RKGTKQITTRDVVIAVGGRPKELTCPGGEH-------------AISSDDIFWMKKKEPGK 193 R+GT Q RDV + P +L GGE + ++++FW+ G+ Sbjct: 1328 REGTLQRLPRDVQVNFLSEPSKLVGLGGESKCLGRIELRVRVGPVVAEEVFWVLPNAVGQ 1507 Query: 194 TLVVGASYV 202 ++G +++ Sbjct: 1508 LDILGNTWL 1534 >gb|ABJQ01001699.1| Ascogregarina taiwanensis Contig1938, whole genome shotgun sequence Length = 572 Score = 26.2 bits (56), Expect = 9.3 Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 10/104 (9%) Frame = -1 Query: 252 KTVPQSITKLENGQLLV----KWTTEDGESCEEAFDTV------LNATGRDPDVAKLGLD 301 K + QS+ L+ G L KW T G S ++ V + + D A+ Sbjct: 323 KGLVQSVYNLDGGYALKITSGKWYTPSGRSIQKERKIVDGQFIEVMPDSMETDSAR---- 156 Query: 302 KARVKLNEKTGRIWVKNEQTSTPNIYAIGDVIDAPELTPVAIQA 345 KAR + GR V TP++ D + PELT + A Sbjct: 155 KARPVFKSEGGRT-VYGGGAITPDVMVTPDTLTTPELTLAKVLA 27 Database: A.taiwanensis/genome.fa Posted date: Feb 9, 2011 9:02 AM Number of letters in database: 6,149,411 Number of sequences in database: 5379 Lambda K H 0.317 0.135 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,731,525 Number of Sequences: 5379 Number of extensions: 56302 Number of successful extensions: 274 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 265 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 274 length of query: 498 length of database: 2,049,803 effective HSP length: 91 effective length of query: 407 effective length of database: 1,560,314 effective search space: 635047798 effective search space used: 635047798 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 56 (26.2 bits)