TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= TR1 #anophagefferens # scaffold_11:subseq(783554,7436).pep (488 letters) Database: T.trahens/genome.fa 131 sequences; 28,680,627 total letters Searching.................................................................done Score E Sequences producing significant alignments: (bits) Value gb|GL349462.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 417 e-117 gb|GL349497.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 246 2e-65 gb|GL349487.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 187 1e-47 gb|GL349508.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 146 3e-35 gb|GL349480.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 126 4e-29 gb|GL349444.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 84 3e-16 gb|GL349463.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 73 5e-13 gb|GL349457.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 35 0.15 gb|GL349482.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 32 0.75 gb|GL349443.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 32 1.3 gb|GL349465.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 31 2.2 gb|GL349439.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 31 2.2 gb|GL349437.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 31 2.2 gb|GL349500.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 30 3.7 gb|GL349436.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 30 3.7 gb|GL349496.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 30 4.9 gb|GL349452.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 30 4.9 gb|GL349445.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 30 4.9 gb|GL349460.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 29 6.3 gb|GL349434.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 29 8.3 >gb|GL349462.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.30, whole genome shotgun sequence Length = 406747 Score = 417 bits (1073), Expect = e-117 Identities = 234/494 (47%), Positives = 305/494 (61%), Gaps = 7/494 (1%) Frame = -1 Query: 2 FDYDXXXXXXXXXXLACSKECAKLGAKVAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKLM 61 +DYD L+C+++ AKLGAKVA+LDFVKPSP G+ WGLGGTCVNVGCIPKKLM Sbjct: 25561 YDYDLVVVGGGSGGLSCARQAAKLGAKVAILDFVKPSPQGTAWGLGGTCVNVGCIPKKLM 25382 Query: 62 HTASIIGETLXXXXXXXXXXXXXXXXHDWESMKSTVQDHIKSLNFKYRVALREAGITYLN 121 HTA+++ + H W+++ V HI SLN+ YR ALR+ GI Y N Sbjct: 25381 HTAALL-KGAADDAKAYGWSVPDGLEHSWDTLVDAVGSHIGSLNWGYRTALRDEGIDYKN 25205 Query: 122 RLGEFEDKNTISLTDKKGNKTSVTAARFIVAVGGRPN-KLGCPGG-EHAIDSDDLFSLPK 179 LG D +T+ +K +T +A ++AVGGRP PG EHAI SDD+F Sbjct: 25204 ELGSIVDAHTVKGVSRKKVETLYSAKYIVIAVGGRPYVPEDVPGALEHAITSDDIFWRFD 25025 Query: 180 APGRVLCVGGGYIALECGGFTAGMGYPTTCMVRSILLRGFDRECVGKIEAHIKHHGVQLQ 239 PG+ LCVG Y+ALE GF G+GY TT VRSILLRGFD+ K+ +++H G + Sbjct: 25024 PPGKTLCVGASYVALEIAGFLTGLGYDTTVAVRSILLRGFDQGMAEKVGKYMEHEGTTFK 24845 Query: 240 VGVTPAKIEKDAATGVLTV-----TDSGGGVHEYDTVLVATGRYADTAALGIDNVPGASA 294 V I KD A+G L V TD EYDTVL ATGR ADTA LG++NV Sbjct: 24844 RPVVVDSIAKDEASGKLKVVLKSRTDGTTEEEEYDTVLFATGRKADTANLGLENV---GI 24674 Query: 295 NVNAKTKKLECVDEQLPGAPHVYAIGDVVEGRPELTPVAIEAGLRLARRLFGGKTEPMDY 354 +AKT K+ + + ++A+GDV++ + ELTPVAI AG LA RLF GKT M+Y Sbjct: 24673 VPDAKTGKIAVDEAEATCVDSIFALGDVID-QLELTPVAIAAGRLLASRLFDGKTTLMNY 24497 Query: 355 ECVATTIFTPLEYGTIGLSEDDAKAQLGECNVESYISEFAPLEYALSETRSERGDGCFAK 414 + T +FTPLEYG +GLSE+DA A+ G N+E + + LE+ + + +AK Sbjct: 24496 TNIPTAVFTPLEYGAVGLSEEDAAAEYGIDNIEVFHTYPQVLEHTVPHREENQ---VYAK 24326 Query: 415 LVVDKSTGKVVGFHYLGPNAGEITQGFSIAMRKGATYADFISTVGIHPTVAEEFTSMTVT 474 L+V K+ V+G HY GPNAGE+ QG IA+ GAT A F +TVGIHPT+AEEFTSM +T Sbjct: 24325 LIVRKADDVVIGVHYAGPNAGEVIQGLGIAVMAGATKAMFDATVGIHPTIAEEFTSMEIT 24146 Query: 475 KSSGESAAKGGCUG 488 ++SG+SA + GC G Sbjct: 24145 RASGKSALRTGC*G 24104 >gb|GL349497.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.65, whole genome shotgun sequence Length = 192353 Score = 246 bits (629), Expect = 2e-65 Identities = 166/476 (34%), Positives = 235/476 (49%), Gaps = 7/476 (1%) Frame = +2 Query: 3 DYDXXXXXXXXXXLACSKECAKLGAKVAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKLMH 62 +YD + ++ A+ GA+VAV++ + LGGTCVNVGC+PKK+M Sbjct: 103451 EYDLVVIGGGSGGMGLARRAAEYGARVAVVEKDR---------LGGTCVNVGCVPKKVMW 103603 Query: 63 TASIIGETLXXXXXXXXXXXXXXXXHDWESMKSTVQDHIKSLNFKYRVALREAGITYLNR 122 A+ + TL DW ++K+ ++ LN Y L +A I Y+ Sbjct: 103604 NAANLASTLGYMPGYGLGVSKEALALDWPTLKANRDAYVARLNGIYERNLAKANIEYVVG 103783 Query: 123 LGEFEDKNTISLTDKKGNKTSVTAARFIVAVGGRPN-KLGCPGGEHAIDSDDLFSLPKAP 181 K +++T G+ T + A +A GG P GGEH I SD F L +AP Sbjct: 103784 SASVAGKGLVAVTAADGSVTELKAPHVAIATGGYPCIPPEMVGGEHVITSDGFFELEEAP 103963 Query: 182 GRVLCVGGGYIALECGGFTAGMGYPTTCMVRS-ILLRGFDRECVGKIEAHIKHHGVQLQV 240 + +G GYIA+E G A +G VR LR FD + V + ++H G+ L Sbjct: 103964 AKAAIIGAGYIAVELAGVLAELGTEVHLYVRKHAALRAFDADVVESLTDALEHSGIILHT 104143 Query: 241 GVTPAKIEKDAATGVLTVTDSGGGVHE---YDTVLVATGRYADTAALGIDNVPGASANVN 297 + KD +G LTVT +G V +D + A GR +T LG+ A V Sbjct: 104144 FSPIGSVAKDEVSGKLTVTTAGENVEVIDGFDVAVAAIGRCPNTDGLGL-----AELGVA 104308 Query: 298 AKTKKLECVDE-QLPGAPHVYAIGDVVEGRPELTPVAIEAGLRLARRLF-GGKTEPMDYE 355 + VD+ Q VYA+GDV R +LTPVAI AG +LA RLF G T MDY Sbjct: 104309 VQDSGHIVVDDFQNTSVEGVYALGDVCNKRVDLTPVAIAAGRKLAARLFKGDATAKMDYT 104488 Query: 356 CVATTIFTPLEYGTIGLSEDDAKAQLGECNVESYISEFAPLEYALSETRSERGDGCFAKL 415 VAT +F+ GT+GL+E +A+ Q G+ V ++ S F + YA+ + + + KL Sbjct: 104489 NVATVVFSHPPIGTVGLTEAEAREQFGDDAVTTFRSRFTNMFYAMGDDKPKT----MMKL 104656 Query: 416 VVDKSTGKVVGFHYLGPNAGEITQGFSIAMRKGATYADFISTVGIHPTVAEEFTSM 471 V +V G H LG A EI QGF++A++ GAT AD +T IHPT AEE +M Sbjct: 104657 VCVGDEHRVAGIHILGLGADEIIQGFAVAVKMGATKADLDATCAIHPTAAEELVTM 104824 >gb|GL349487.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.55, whole genome shotgun sequence Length = 273410 Score = 187 bits (476), Expect = 1e-47 Identities = 156/494 (31%), Positives = 231/494 (46%), Gaps = 25/494 (5%) Frame = +2 Query: 3 DYDXXXXXXXXXXLACSKECAKLGAKVAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKL-- 60 +YD LA ++ A+ GA+V + + + LGGTCVNVGC+PKK+ Sbjct: 156761 EYDLAVLGGGSGGLATARRAAEHGARVVLAEGGR---------LGGTCVNVGCVPKKVTW 156913 Query: 61 --MHTASIIGETLXXXXXXXXXXXXXXXXH---DWESMKSTVQDHIKSLNFKYRVALREA 115 ++T L + ++K+ +++ LN Y AL+ A Sbjct: 156914 EAVNTLEAANHDLGAFGGYSGPDDARSHVEAKIHYPTLKARRDAYVERLNGIYASALKNA 157093 Query: 116 G-----ITYLN---RLGEFEDKNTISLTDKKGNKTSVTAARFIVAVGGRPNKLGCPGG-- 165 G I L RL + D + + K+ T +A+ ++A G P G Sbjct: 157094 GGSGGSIDILREDARLWKDSDGHVAGVEGKE-TGTVASASSVVIATGSTPLFPASVAGAA 157270 Query: 166 EHAIDSDDLFSLPKAPGRVLCVGGGYIALECGGFTAGMGYPTTCMVRS-ILLRGFDRECV 224 E DSD F+ K P V VGGGYIA+E G A +G TT +VR +LR D + Sbjct: 157271 ELGSDSDAFFTWSKPPASVAVVGGGYIAVELAGMLAALGSETTMLVRGPQVLRHIDPQIA 157450 Query: 225 GKIEAHIKHHGVQLQVGVTPAKIEKDAATGVLTVT--DSGGGVHEYDTVLVATGRYADTA 282 + + + GV L++ + + K + G+L V D+ + +D VL ATGR T Sbjct: 157451 DVLHSQLTSAGVDLRLNTGVSAVTK-GSDGLLEVASPDAQLPLGMWDKVLFATGRAPLTQ 157627 Query: 283 ALGIDNVPGASANVNAKTKKLECVD-EQLPGAPHVYAIGDVVEGRPELTPVAIEAGLRLA 341 LG+ A + VD PHV+AIGDV +LTPVAI+AG LA Sbjct: 157628 GLGL-----RDAGIELNDAGAIVVDPHHQTSIPHVFAIGDVANTPGDLTPVAIKAGRTLA 157792 Query: 342 RRLF---GGKTEPMDYECVATTIFTPLEYGTIGLSEDDAKAQLGECNVESYISEFAPLEY 398 LF P+DY + T +FT G++GLSE +A A+ G V+ Y + F L Y Sbjct: 157793 EWLFNPAAAGAPPLDYATIPTVMFTHPPIGSVGLSEAEAVAKFGADAVKVYSASFTNLFY 157972 Query: 399 ALSETRSERGDGCFAKLVVDKS-TGKVVGFHYLGPNAGEITQGFSIAMRKGATYADFIST 457 L E ++ ++VV+ + + +V+G H +G EI QGF +A+ GAT AD +T Sbjct: 157973 GLHEPADKQ--PTLMRIVVNTADSERVLGIHGIGRGMDEIMQGFGVAVTMGATKADLDAT 158146 Query: 458 VGIHPTVAEEFTSM 471 + IHPT EE +M Sbjct: 158147 IAIHPTAGEELVTM 158188 >gb|GL349508.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.76, whole genome shotgun sequence Length = 62085 Score = 146 bits (369), Expect = 3e-35 Identities = 133/461 (28%), Positives = 192/461 (41%), Gaps = 8/461 (1%) Frame = +1 Query: 19 SKECAKLGAKVAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKLMH-TASIIGETLXXXXXX 77 + C G VA++D +P GGTC GC PKK++ TA ++ Sbjct: 47971 ASRCRNAGWSVAIVD-ERP--------FGGTCALRGCDPKKVLRRTAEVVDAARLMNGHG 48123 Query: 78 XXXXXXXXXXHDWESMKSTVQDHIKSLNFKYRVALREAGITYLNRLGEFEDKNTISLTDK 137 DW ++ + + + A + GI +F +NTIS+ + Sbjct: 48124 ITGPAPTV---DWPALMAFKRSFTDPVPNAREKAFADKGIATFKGTAQFIGENTISVGED 48294 Query: 138 KGNKTSVTAARFIVAVGGRPNKLGCPGGEHAIDSDDLFSLPKAPGRVLCVGGGYIALECG 197 + + A ++ G +P L PG EH I SDD L P RVL +GGGY++ E Sbjct: 48295 R-----LEARYIVITSGAKPVPLSMPGAEHVITSDDFLELEALPKRVLLIGGGYVSFEFA 48459 Query: 198 GFTAGMGYPTTCMVRSIL-LRGFDRECVGKIEAHIKHHGVQLQVGVTPAKIEK-DAATGV 255 A G + R L+ FD + V + + G+ + IE+ + GV Sbjct: 48460 HIAARAGAEVVMVDRGERPLKAFDPDLVDMLVDRTRALGITFRAKAEVTAIEQANGGLGV 48639 Query: 256 LTVTDSGGGVHEYDTVLVATGRYADTAALGIDNVPGASANVNAKTKKLECVDEQLPGA-- 313 + D E D V+ GR A +AL D ANV A +E V+E L Sbjct: 48640 IARIDGAEERFEADLVVHGAGRAAAISALEPD-----KANVKADGTGVE-VNEYLQSLTN 48801 Query: 314 PHVYAIGD-VVEGRPELTPVAIEAGLRLARRLFGGKTEPMDYECVATTIFTPLEYGTIGL 372 P VYA GD P LTPVA +A L G DY V + +FT E +GL Sbjct: 48802 PAVYAAGDAAATAGPPLTPVASLEAKAVAANLLEGNHATPDYTGVPSAVFTVPELVRVGL 48981 Query: 373 SEDDAKAQ--LGECNVESYISEFAPLEYALSETRSERGDGCFAKLVVDKSTGKVVGFHYL 430 SE DA AQ EC F+ + ET + AK++V+ +G+++G H L Sbjct: 48982 SEADATAQGLEFECKFSDMRGWFSVRR--VGETHAA------AKVLVEHGSGRILGAHIL 49137 Query: 431 GPNAGEITQGFSIAMRKGATYADFISTVGIHPTVAEEFTSM 471 GP A E F +AMR G D V +P+ + S+ Sbjct: 49138 GPEASETINLFGLAMRTGLKAEDLKGLVSAYPSAGSDIGSL 49260 Score = 117 bits (293), Expect = 2e-26 Identities = 125/497 (25%), Positives = 202/497 (40%), Gaps = 12/497 (2%) Frame = +3 Query: 4 YDXXXXXXXXXXLACSKECAKLGAKVAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKLMHT 63 YD + + A+LGA+VA++ +GGTCVNVGC+P K + Sbjct: 46233 YDLAVIGAGSAGFSAAITAAELGARVALIGHGT---------IGGTCVNVGCVPSKTLIR 46385 Query: 64 ASIIGETLXXXXXXXXXXXXXXXXH--DWE---SMKSTVQDHIKSLNFKYRVALREAGIT 118 A+ ETL DW S K + ++ +K +A E GIT Sbjct: 46386 AA---ETLHQGRAAERFAGIEARVGLTDWSATVSQKDELVGALRQAKYKDLLAAYE-GIT 46553 Query: 119 YLNRLGEFEDKNTISLTDKKGNKTSVTAARFIVAVGGRPNKLGCPGGEHA--IDSDDLFS 176 Y+ E + ++ + A + ++ G RP PG E + S + Sbjct: 46554 YV------EGRARLATDGVLVEGEPLRAGKVVITTGARPALPSIPGIEEVSYLTSTTVLE 46715 Query: 177 LPKAPGRVLCVGGGYIALECGGFTAGMGYPTTCMVRSILLRGFDRECVGKIEAHIKHHGV 236 + + P +L +GGGYI E A G T R LL + E + + + G+ Sbjct: 46716 IAELPRSLLIIGGGYIGCELAQLFARAGVEVTIACRRGLLPAAEPEVGTALTGYFEDEGI 46895 Query: 237 QLQVGVTPAKIEKDAATGVLTVTDSGGGVH-EYDTVLVATGRYADTAALGIDNVPGASAN 295 +++ G+ +I + +L G V E + VL+A+GR +T +G+ A A Sbjct: 46896 RVRSGLKYRQIRETEDGVILNALAEGNDVRLEAERVLIASGRRPNTEEMGL-----AEAG 47060 Query: 296 VNAKTKKLECVDEQL-PGAPHVYAIGDVVEGRPELTPVAIEAGLRLARRLFGGKTEPMDY 354 V VDE+L +YA GDV GR + +A A A G + D Sbjct: 47061 VVLLPNGGIEVDERLRTTKAGIYAAGDVT-GRDQFVYMAAYAARLAAENALNGDSRRYDN 47237 Query: 355 ECVATTIFTPLEYGTIGLSEDDAKAQLGECNVESYIS-EFAPLEYALSETRSERGDGCFA 413 + +FT + ++GL+E A Q G S +S + P A +TR Sbjct: 47238 AAMPAVVFTDPQVASVGLTE-AAAGQAGHRVKTSLLSLDQVPRALAARDTRG------LI 47396 Query: 414 KLVVDKSTGKVVGFHYLGPNAGEITQGFSIAMRKGATYADFISTVGIHPTVAE--EFTSM 471 KLV ++ T +++G H L P + Q +A++ G T A+ T+ + T E + + Sbjct: 47397 KLVAEEETDRLLGAHILAPEGADSIQTAVLAIKHGLTVAELAETIFPYLTTVEGLKLAAQ 47576 Query: 472 TVTKSSGESAAKGGCUG 488 T T+ + G G Sbjct: 47577 TFTRDVARLSCCAG*RG 47627 >gb|GL349480.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.48, whole genome shotgun sequence Length = 315632 Score = 126 bits (316), Expect = 4e-29 Identities = 120/453 (26%), Positives = 190/453 (41%), Gaps = 13/453 (2%) Frame = +2 Query: 47 GGTCVNVGCIPKK-LMHTASIIGETLXXXXXXXXXXXXXXXXHDWESMKSTVQDHIKSLN 105 GGTC+NVGCIP K L+HT + + D M + Q+ + +L Sbjct: 131336 GGTCLNVGCIPSKNLLHTTHLYHLSKGYFEEHGIVVPGEGTSIDVAKMMESKQEAVTTLT 131515 Query: 106 FKYRVALREAGITYLNRLGEFEDKNTISLTDKKGNKTSVTAARFIVAVGGRPNKLG-CPG 164 ++ G+TY G+ N +++ G + + A + ++A G P +L P Sbjct: 131516 RGIEGLFKKNGVTYSQGWGKITSPNEVTVDLNDGGQEVIPAKKIVIATGSDPIELPFMPY 131695 Query: 165 GEH-AIDSDDLFSLPKAPGRVLCVGGGYIALECGGFTAGMGYPTTCM-VRSILLRGFDRE 222 E + S +L + P ++ +GGG I LE G A +G T + + G D E Sbjct: 131696 DEKKVVSSTGALALEEVPKKMAVIGGGVIGLELGSVWARLGAEVTVIEFMPAIGAGMDAE 131875 Query: 223 CVGKIEAHIKHHGVQLQVG--VTPAKIEKDAATGVLTVTDSGGGVH----EYDTVLVATG 276 + +K G++ VT A D GV+ T++ G + D LV+ G Sbjct: 131876 IAKNFQRILKRQGLKFMTSTKVTGADTSGD---GVVIHTEAAKGGKAKSLDVDVALVSVG 132046 Query: 277 RYADTAALGIDNVPGASANVNAKTKKLECVDEQLP-GAPHVYAIGDVVEGRPELTPVAIE 335 R LG+++V V + + DE P +YAIGDV +G L A E Sbjct: 132047 RRRFIDGLGLEDV-----GVATDERGMVLTDENFQTNVPSIYAIGDVRDGAM-LAHKAEE 132208 Query: 336 AGLRLARRLFGGKTEPMDYECVATTIFTPLEYGTIGLSEDDAKAQLGECNVESYISEFAP 395 G+ LA F G+ +DY + + I+T E +G +E++ K E V + F P Sbjct: 132209 EGVVLAEA-FHGEGFALDYNSIPSVIYTSPEVAWVGKNEEELK----EAGVAYNVGTF-P 132370 Query: 396 LEYALSETRSERGDGCFAKLVVDKSTGKVVGFHYLGPNAGEITQGFSIAMRKGATYADFI 455 + DG K++ DK T ++G H + +A E+ + + GA+ D Sbjct: 132371 MAANSRAKACGYADGMI-KVIADKETDAILGVHLIAESASELIPEAVLGVAFGASSEDIA 132547 Query: 456 STVGIHPTVAEEF--TSMTVTKSSGESAAKGGC 486 T HPT +E M VT A+G C Sbjct: 132548 MTCHAHPTQSEALKEACMAVTGKPIHF*AEGVC 132646 >gb|GL349444.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.12, whole genome shotgun sequence Length = 562821 Score = 83.6 bits (205), Expect = 3e-16 Identities = 107/432 (24%), Positives = 173/432 (40%), Gaps = 11/432 (2%) Frame = -2 Query: 47 GGTCVNVGCIPKKLMHTASIIGETLXXXXXXXXXXXXXXXXHD--WESMKSTVQDHIKSL 104 GG C+NVGC+P K + A E M+ ++ I + Sbjct: 90254 GGDCLNVGCVPSKALIAAGHAAYRARNAHEYGVTVDSVSVDFGQIMERMRE-IRAEISAD 90078 Query: 105 NFKYRVALREAGITYLNRLGEFEDKNTISLTDKKGNKTSVTAARFIVAVGGRPNKLGCPG 164 + +R L+E G+ G+F D +I + N + R +A GGRP PG Sbjct: 90077 DSAHR--LKENGVDVFFGRGKFIDAKSIEV-----NGVVLNFKRACIATGGRPGIPNIPG 89919 Query: 165 GEHA--IDSDDLFSLPKAPGRVLCVGGGYIALECGGFTAGMGYPTTCMVRS-ILLRGFDR 221 A + + +F+L + P R+ +G G I E A G RS +LR + Sbjct: 89918 LAEAEPLTNLSVFNLTELPSRLAVIGTGPIGCELAQTFARFGSLVVLTGRSGSILRNEEP 89739 Query: 222 ECVGKIEAHIKHHGVQLQVGVTPAKIEKDAATGV--LTVTDSGGGVHE---YDTVLVATG 276 + ++A ++ GV L++ + + D TGV L V + G V D +LVA G Sbjct: 89738 DAAVVLQAQLEAEGVDLRLNLEYISVRTDPETGVKILVVREDGADVETEIVVDEILVAAG 89559 Query: 277 RYADTAALGIDNVPGASANVNAKTKKLECVDEQLPGA-PHVYAIGDVVEGRPELTPVAIE 335 R + LG++ +A + V++ L VYA GDV Sbjct: 89558 RKPNVDNLGLE-----AAGIEYSPLHGIAVNDSLQTTNSSVYACGDVASSFQFTHMADAM 89394 Query: 336 AGLRLARRLFGGKTEPMDYECVATTIFTPLEYGTIGLSEDDAKAQLGECNVESYISEFAP 395 A + + LF G + D V +T E +GL E D + V + E A Sbjct: 89393 ARIVIRNALFFGSAKVTDL-VVPWCTYTYPEVAHVGLYERDLERAGASYTV--WKRELAH 89223 Query: 396 LEYALSETRSERGDGCFAKLVVDKSTGKVVGFHYLGPNAGEITQGFSIAMRKGATYADFI 455 + AL E+ + F K D + G+++G + AGE+ F+IA++ + Sbjct: 89222 NDRALCESETAG----FVKAFTD-AKGRILGATIVAEKAGEMISEFTIAIKHKIPLGELG 89058 Query: 456 STVGIHPTVAEE 467 + + +PT A E Sbjct: 89057 NVIHPYPTQAFE 89022 >gb|GL349463.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.31, whole genome shotgun sequence Length = 395032 Score = 72.8 bits (177), Expect = 5e-13 Identities = 116/482 (24%), Positives = 195/482 (40%), Gaps = 31/482 (6%) Frame = -1 Query: 18 CSKECAKLGAKVAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKLMHTASIIGETLXXXXXX 77 C+ AK G +VAV+D + +GG CV+ G IP K A I+ T Sbjct: 275545 CAIAAAKKGKRVAVVD--------AEADIGGVCVHTGTIPSKTFREA-ILHLTGYRNQSF 275393 Query: 78 XXXXXXXXXXHDWESMKSTVQDHIKSLNFKYRVALREAGITYLNRLGEFEDKNTIS---- 133 + + + V+ I + L I + F D NT++ Sbjct: 275392 YTGSSLARKTVTVKDIVNRVKAVIDKEHAIVSSQLLRNHIDIIPGHASFVDSNTVAIGKP 275213 Query: 134 ---LTDKKG-------------NKTSVTAARFIVAVGGRPNKLG-CP-GGEHAIDSDD-L 174 L D++ K VTA +F+++VG RP + G P + DSD+ L Sbjct: 275212 WSHLPDRRARLNAMEGFSVTSDEKRRVTADKFLLSVGTRPARPGHIPFEAKQVFDSDEML 275033 Query: 175 FSLPKAPGRVLCVGGGYIALECG---GFTAGMGYPTTCMVRSILLRGFDRECVGKIEAHI 231 P ++ VG G I +E G + +L D E V + + Sbjct: 275032 IDDWVIPRTLIVVGAGVIGMEYASMMNIIPGSRVYVVDQRPTQILPFADTEMVEALCHLM 274853 Query: 232 KHHGVQLQVGVTPAKIE---KDAATGVLTVTDSGGGVHEYDTVLVATGRYADTAALGIDN 288 + G + +G T + + + +TV + G V D +L A GR A+T +L + Sbjct: 274852 RQQGARFLLGETVSSCDVTVRSDGRETVTVELASGKVLFGDALLYAVGRQANTDSLNL-- 274679 Query: 289 VPGASANVNAKTKKLECVDEQ-LPGAPHVYAIGDVVEGRPELTPVAIEAGLRLARRLFGG 347 ++ + + L VD++ + HVYA GD + G P L V+ + G +A +F Sbjct: 274678 ---SAIGLETDKRGLISVDDKFMTSVGHVYAAGDCI-GFPALASVSGQQGRLVADYMFDD 274511 Query: 348 KTEPMDYE-CVATTIFTPLEYGTIGLSEDDAKAQLGECNVESYISEFAPLEYALSETRSE 406 T+ ++ + I+T E IG+SE + A + VE ++ +A L+++ Sbjct: 274510 ITDRVETQGDFPYGIYTVPELSFIGMSERELTA--AQIPVEVGLASYA----ELAKSAMI 274349 Query: 407 RGDGCFAKLVVDKSTGKVVGFHYLGPNAGEITQGFSIAMRKGATYADFISTVGIHPTVAE 466 G KL+ T +++G +G A EI AM T F++ V +P+ +E Sbjct: 274348 GGSYGLLKLLFCPHTFRLLGASAIGEGATEIIHVAQTAMALNGTIDLFLTQVFNYPSYSE 274169 Query: 467 EF 468 F Sbjct: 274168 AF 274163 >gb|GL349457.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.25, whole genome shotgun sequence Length = 436284 Score = 34.7 bits (78), Expect = 0.15 Identities = 43/154 (27%), Positives = 62/154 (40%), Gaps = 14/154 (9%) Frame = -2 Query: 183 RVLCVGGGYIALECGGFTAGMGYP----TTCMVRSILLRG---FDRECVGKIEAHIKHHG 235 R + +GGG + +E A YP T L+ R E + G Sbjct: 136109 RAMVIGGGIVGVELAAELAE-AYPDFEVTLAHSGDQLMSSSPSVPRAAAEYAERSLSLSG 135933 Query: 236 VQLQVG--VTPAKIEKDAATGVLTVTDSGGGV-HEYDTVLVATGRYADTAALGIDNVPGA 292 V+L +G +T A L + +G + +E D V VATG +T L PG Sbjct: 135932 VRLALGHRITALPQAAPGAPHPLRLGAAGTDIEYESDMVFVATGLLPNTGFLSQPAAPGN 135753 Query: 293 SANV----NAKTKKLECVDEQLPGAPHVYAIGDV 322 +A + +AK L APHV+A+GDV Sbjct: 135752 AAPLAHALDAKGFVTVTPALNLDSAPHVFALGDV 135651 >gb|GL349482.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.50, whole genome shotgun sequence Length = 300393 Score = 32.3 bits (72), Expect = 0.75 Identities = 19/50 (38%), Positives = 22/50 (44%) Frame = +2 Query: 155 GRPNKLGCPGGEHAIDSDDLFSLPKAPGRVLCVGGGYIALECGGFTAGMG 204 G GC GG A + + A GRVLC GG CGG +G G Sbjct: 274556 GGQGACGCEGGGEAAAAGGCIACCGAGGRVLCWAGGGRGGVCGGGGSGGG 274705 >gb|GL349443.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.11, whole genome shotgun sequence Length = 571036 Score = 31.6 bits (70), Expect = 1.3 Identities = 21/63 (33%), Positives = 29/63 (46%) Frame = +3 Query: 216 LRGFDRECVGKIEAHIKHHGVQLQVGVTPAKIEKDAATGVLTVTDSGGGVHEYDTVLVAT 275 L G R +G++ H+ HH K+ D TG L D GGG + D LV + Sbjct: 106830 LVGNRRHVLGRV--HVAHHSA--------GKMLSDEVTGAL---DGGGGAADADLALVGS 106970 Query: 276 GRY 278 GR+ Sbjct: 106971 GRH 106979 >gb|GL349465.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.33, whole genome shotgun sequence Length = 407772 Score = 30.8 bits (68), Expect = 2.2 Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 11/120 (9%) Frame = +1 Query: 218 GFDRECVGKIEA---------HIKHHGVQLQVGVTPAKIEKDAATGVLTVTDSGGGVHEY 268 G DR C G + ++ HG + K AATGV TDSGG V Sbjct: 403036 GRDRVCAGSDDVWGVVAVEIGYLDFHGAGAVCVDDKGRGGKGAATGVAPQTDSGGVVAGG 403215 Query: 269 DTVLVATGRYADTAALGIDNVPGASANVNAKTKKLECVDEQLPGAPHVYAIGD--VVEGR 326 D V A G + + + G A + + + L VD++ A V + D VV GR Sbjct: 403216 DEVDGAVG-------VKVGVIDGTGAEEDTRDEGLRLVDKE---AAAVVGVEDERVVVGR 403365 >gb|GL349439.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.7, whole genome shotgun sequence Length = 618594 Score = 30.8 bits (68), Expect = 2.2 Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Frame = +2 Query: 320 GDVVEG---RPELTPVAIEAGLRLARRLFGGKTEPMDYECVATTIFTPLEYGTIGLSEDD 376 GDV G R TPV+IE G R ARRL T L+YG IG++ED+ Sbjct: 497684 GDVTRGSCVRTHTTPVSIEVGAR-ARRL---------------TTALQLKYGGIGVNEDE 497815 >gb|GL349437.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.5, whole genome shotgun sequence Length = 654703 Score = 30.8 bits (68), Expect = 2.2 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Frame = -3 Query: 420 STGKVVGFHYLGPNAGEITQGFSIAMRKGA-TYADFISTVGIHPTVAEEFTSMTVTKSSG 478 +TG+V L P G++T I KG Y +T +PT A+E +T+T S Sbjct: 83693 ATGQVT-LGSLEPTTGKVTPACDIPQPKGPYVYPGAYTTEMAYPTDADELALVTITPS-- 83523 Query: 479 ESAAKGGCUG 488 GGC G Sbjct: 83522 -----GGCIG 83508 >gb|GL349500.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.68, whole genome shotgun sequence Length = 140327 Score = 30.0 bits (66), Expect = 3.7 Identities = 46/179 (25%), Positives = 68/179 (37%), Gaps = 14/179 (7%) Frame = -2 Query: 187 VGGGYIALECGGFTAGMGYPTTCMVRSI-LLRGFDRECVGKIEAHIKH-HGVQLQVGVTP 244 VG G+I LE G + + ++ DRE ++ I+ G L V V Sbjct: 21247 VGAGFIGLELADALVASGVDVVLLEYAPQIMPPMDREMADALQTRIEGGSGDALFVAVGD 21068 Query: 245 AKIEKDAATG--VLTVTDSGGGVHEYDTVLVATGRYADTAALGIDNVPGASANVNAKTKK 302 I + T L + +G + D V+VA G A++ + + A Sbjct: 21067 GVIGFRSRTSGHPLEILTAGHEAYPCDLVVVAVGVKAESGLARDAGIALGARGAIAVDAS 20888 Query: 303 LECVDEQLPGAPHVYAIGDVVE------GRP---ELTPVAIEAGLRLARRLFG-GKTEP 351 D P V+A+GDVVE GRP L A AG +A + G G+ P Sbjct: 20887 FRTSD------PRVFAVGDVVETADRVTGRPMSLALAGPANRAGRIVADTIVGAGRAAP 20729 >gb|GL349436.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.4, whole genome shotgun sequence Length = 664084 Score = 30.0 bits (66), Expect = 3.7 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 1/96 (1%) Frame = +2 Query: 215 LLRGFDRECVGKIEAHIKHHGVQLQVGVTPAKIEKDAATGV-LTVTDSGGGVHEYDTVLV 273 LL G + V EA + H V + + DA V L D GGG E D+ LV Sbjct: 573959 LLLGLCQRDVANGEALRRDHVVGVLESSLLLLVSLDALLEVRLGHADGGGGAREDDS-LV 574135 Query: 274 ATGRYADTAALGIDNVPGASANVNAKTKKLECVDEQ 309 G A AALG+ GA + A + ++ D++ Sbjct: 574136 GDGHVAGVAALGLGTGLGAVVDQLALARLVDGEDDK 574243 >gb|GL349496.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.64, whole genome shotgun sequence Length = 195173 Score = 29.6 bits (65), Expect = 4.9 Identities = 23/74 (31%), Positives = 32/74 (43%) Frame = -2 Query: 240 VGVTPAKIEKDAATGVLTVTDSGGGVHEYDTVLVATGRYADTAALGIDNVPGASANVNAK 299 VGV + TG+L D GGG+ E D +L + A G+ ++ G V A Sbjct: 84901 VGVDRLDNLRGEDTGLLGEADKGGGLDEVDDLLEGGDGTVNVGA-GVGDLVGGHGLVEAL 84725 Query: 300 TKKLECVDEQLPGA 313 + VDE GA Sbjct: 84724 DDEAARVDEPEAGA 84683 >gb|GL349452.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.20, whole genome shotgun sequence Length = 525314 Score = 29.6 bits (65), Expect = 4.9 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Frame = -1 Query: 245 AKIEKDAATGVLTVTDSGGGVHEY-DTVLVATGRYADTAALGIDNVPGASANVNAKTKKL 303 A+IE D ATGV++VTD G Y D+V +A + + GA+ +L Sbjct: 22511 ARIELDPATGVVSVTDLGSSNGTYVDSVRLAKNETVVIGPKSLVLLAGAAPGRGVVVVRL 22332 Query: 304 EC 305 C Sbjct: 22331 SC 22326 >gb|GL349445.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.13, whole genome shotgun sequence Length = 561051 Score = 29.6 bits (65), Expect = 4.9 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%) Frame = -1 Query: 332 VAIEAGLRLARRLFG----GKTEPMDYECVATTIFTPLEYGTIGLSEDDAKAQLGECNVE 387 V++ GL LA G +TEP+ VA + E G +GL+ DD + E VE Sbjct: 296559 VSLALGLELAAAALGLGLLTETEPLGLLGVAQLLLENKELGFVGLNVDDLAGPVDEPVVE 296380 Query: 388 SYISEFAPLEYALSETRSER 407 P++ + + R +R Sbjct: 296379 E-----EPVDTRVGKVRGQR 296335 Score = 29.3 bits (64), Expect = 6.3 Identities = 18/49 (36%), Positives = 26/49 (53%) Frame = +1 Query: 154 GGRPNKLGCPGGEHAIDSDDLFSLPKAPGRVLCVGGGYIALECGGFTAG 202 GGR +LG G EH + ++ AP R LC G ++A +CG + G Sbjct: 492736 GGR--RLGRSGIEHTGEGGNVGRRRLAPLRGLCELGCHVAAQCGTHSGG 492876 >gb|GL349460.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.28, whole genome shotgun sequence Length = 422706 Score = 29.3 bits (64), Expect = 6.3 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = -2 Query: 27 AKVAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKLMHTASI 66 A A D V SPA + W L CV + + HTAS+ Sbjct: 355967 AGAAATDAVPVSPASTVWTLASACVR-----RSMFHTASV 355863 >gb|GL349434.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.2, whole genome shotgun sequence Length = 680870 Score = 28.9 bits (63), Expect = 8.3 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%) Frame = +1 Query: 243 TPAKIEKDAATGVLTVTDSGGGVHEYDTVLVA--TGRYADTAALGIDNVPGASANVNAKT 300 +PA + D ATG LTV+ + G + ++V A TG + G D+ ++ A Sbjct: 61162 SPAVVGADVATGTLTVSITDGHTDDINSVAFAGSTGDGDNVFVSGSDDASIKVWDLRAPH 61341 Query: 301 KKLECVDEQLPGAPHVYAIGD 321 + + L G HV + GD Sbjct: 61342 IPVGVLIGHLEGVAHVASKGD 61404 Database: T.trahens/genome.fa Posted date: Feb 9, 2011 9:02 AM Number of letters in database: 28,680,627 Number of sequences in database: 131 Lambda K H 0.317 0.136 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,552,560 Number of Sequences: 131 Number of extensions: 343372 Number of successful extensions: 1973 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 22 Number of HSP's that attempted gapping in prelim test: 1740 Number of HSP's gapped (non-prelim): 588 length of query: 488 length of database: 9,560,209 effective HSP length: 103 effective length of query: 385 effective length of database: 9,546,716 effective search space: 3675485660 effective search space used: 3675485660 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 62 (28.5 bits)