TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000036_1.0 # Protein # Thioredoxin reductase 3 (TR3) # Homo sapiens # Complete (754 letters) Database: P.ultimum/genome.fa 82 sequences; 42,801,618 total letters Searching.................................................................................done Score E Sequences producing significant alignments: (bits) Value gb|GL376634.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 478 e-134 gb|GL376632.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 236 9e-62 gb|GL376566.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 145 2e-34 gb|GL376629.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 134 5e-31 gb|GL376560.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 77 7e-14 gb|GL376585.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 60 1e-08 gb|GL376631.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 57 7e-08 gb|GL376611.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 41 0.004 gb|GL376624.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 35 0.38 gb|GL376636.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 33 1.4 gb|GL376637.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 32 2.4 gb|GL376635.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 32 2.4 gb|GL376603.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 32 3.2 gb|GL376600.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 32 3.2 gb|GL376577.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 31 5.5 gb|GL376573.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 30 7.1 gb|GL376638.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 30 9.3 gb|GL376605.1| Pythium ultimum DAOM BR144 unplaced genomic scaff... 30 9.3 >gb|GL376634.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875582037, whole genome shotgun sequence Length = 1414051 Score = 478 bits (1229), Expect = e-134 Identities = 255/498 (51%), Positives = 336/498 (67%), Gaps = 7/498 (1%) Frame = -3 Query: 264 LAYDYDXXXXXXXXXXXXCAKEAAILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGCIPKK 323 + YDYD C+KEAA GKKV VLD+V PS GTSWGLGGTCVNVGCIPKK Sbjct: 1305443 VTYDYDLVVIGGGSGGLACSKEAAKYGKKVCVLDYVKPSLVGTSWGLGGTCVNVGCIPKK 1305264 Query: 324 LMHQAALLGQALC-DSRKFGWEYNQQVRHNWETMTKAIQNHISSLNWGYRLSLREKAVAY 382 LMHQ++L+G+ + DS+ FGW +Q +W M K++ ++I S+N+ Y++ LR+K V Y Sbjct: 1305263 LMHQSSLIGETIHKDSKAFGWTVGEQT-FDWAQMLKSVNSYIKSINFKYKVELRDKKVKY 1305087 Query: 383 VNSYGEFVEHHKIKATN-KKGQETYYTAAQFVIATGERPRYLGIQGDKEYCITSDDLFSL 441 N G F++ H ++ + KKG +T T VIA G RP+ L +G + I+SDD+F Sbjct: 1305086 ENLLGSFIDAHTLELWHPKKGTKTV-TTRDVVIAVGGRPKPLACEGG-DLAISSDDIFWR 1304913 Query: 442 PYCPGKTLVVGASYVALECAGFLAGFGLDVTVMVRSILLRGFDQEMAEKVGSYME-QHGV 500 PGKTLVVGASYVALECAGF+ G G DV +MVRSILLRGFDQ+MA+K+G +ME + + Sbjct: 1304912 KEAPGKTLVVGASYVALECAGFMKGMGYDVKIMVRSILLRGFDQDMADKIGEFMEVESKI 1304733 Query: 501 KFLRKFIPVMVQQLEKGSPGKLKVLAK-STEGTETIEGVYNTVLLAIGRDSCTRKIGLEK 559 +F+R +P + +LE G ++L K +T E E ++TVL A GRD K+GL+K Sbjct: 1304732 EFIRGCVPQSIMKLENG-----QLLVKWTTADGEACEEAFDTVLNATGRDPDVAKLGLDK 1304568 Query: 560 IGVKINEKSGKIPVNDVEQTNVPYVYAVGDILEDKPELTPVAIQSGKLLAQRLFGASLEK 619 GVK+N K+G+I V + EQT+ P VYA+GD++ D PELTPVAIQ+G+LLA+RL+ Sbjct: 1304567 AGVKLNPKTGRIWVEN-EQTSTPNVYAIGDVI-DAPELTPVAIQAGRLLARRLYNNETTL 1304394 Query: 620 CDYINVPTTVFTPLEYGCCGLSEEKAIEVYKKENLEIYHTLFWPLEWTVAGREN---NTC 676 DY V T VFTP+EYGCCGLSEE +IE + ++NLEIYH F PLEW+++ ++C Sbjct: 1304393 MDYDKVCTAVFTPIEYGCCGLSEEASIEKFGEDNLEIYHQNFTPLEWSLSSATRPAASSC 1304214 Query: 677 YAKIICNKFDHDRVIGFHILGPNAGEVTQGFAAAMKCGLTKQLLDDTIGIHPTCGEVFTT 736 Y K+IC+K V+GFH LGPNAGEVTQ AMK G T + + +GIHPT E+FTT Sbjct: 1304213 YVKVICDKSRDKYVVGFHYLGPNAGEVTQAMGLAMKLGFTYDQMVNVVGIHPTTAEIFTT 1304034 Query: 737 LEITKSSGLDITQKGCUG 754 LE+TKSSG GC G Sbjct: 1304033 LEVTKSSGASAAAGGC*G 1303980 >gb|GL376632.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875582035, whole genome shotgun sequence Length = 696189 Score = 236 bits (601), Expect = 9e-62 Identities = 165/504 (32%), Positives = 250/504 (49%), Gaps = 12/504 (2%) Frame = +1 Query: 246 QTFQAYQSGLLQKLLQEDLAYDYDXXXXXXXXXXXXCAKEAAILGKKVMVLDFVVPSPQG 305 Q +QS L + + D YDY A+ AA G KV+V++ +G Sbjct: 427276 QQLHQHQSLSLSRSMSADTVYDY--IAIGGGSGGMASARRAATYGAKVLVVE------RG 427431 Query: 306 TSW---GLGGTCVNVGCIPKKLMHQAALLGQALCDSRKFG-------WEYNQQVRHNWET 355 + GLGGTCVN GC+PKK+M AA + L + + +E+ +W+ Sbjct: 427432 RKYDGAGLGGTCVNYGCVPKKVMFNAASHVEHLHRNADYSITTTTKPFEFGD---FDWKN 427602 Query: 356 MTKAIQNHISSLNWGYRLSLREKAVAYVNSYGEFVEHHKIKATNKKGQETYYTAAQFVIA 415 M +I+ LN Y +L + V + V K++ YT ++A Sbjct: 427603 MKTKRDAYIARLNGIYERNLGNAQIDLVEGVAKLVAKDKVEVDG-----VVYTGKHILVA 427767 Query: 416 TGERPRYLGIQGDKEYCITSDDLFSLPYCPGKTLVVGASYVALECAGFLAGFGLDVTVMV 475 G P I G E+ I SDD F L P K VVGA Y+A+E AG D ++ Sbjct: 427768 VGGVPSLPPIPGI-EHVIDSDDFFKLEEQPKKVAVVGAGYIAIEIAGIFNALKSDTSLFC 427944 Query: 476 R-SILLRGFDQEMAEKVGSYMEQHGVKFLRKFIPVMVQQLEKGSPGKLKVLAKSTEGTET 534 R +LR FD + + + E+ G+ F+R +++++K + G L++ AK G E Sbjct: 427945 RFDHVLRTFDPIVRDLINEEGEKAGINFVRNS---RIERIDKQADGTLQITAK-VNGEEQ 428112 Query: 535 IEGVYNTVLLAIGRDSCTRKIGLEKIGVKINEKSGKIPVNDVEQTNVPYVYAVGDILEDK 594 + G +N +L AIGR+ T+ +GLE++GVK+NEK G I V+ E T+V +YA+GD Sbjct: 428113 VIGGFNQILYAIGREPRTKDLGLEEVGVKLNEK-GFIVVDAQENTSVSGIYAIGDATTTG 428289 Query: 595 PELTPVAIQSGKLLAQRLFGASLEKC-DYINVPTTVFTPLEYGCCGLSEEKAIEVYKKEN 653 ELTPVAI +G+ L+ RLFG C Y +PT VF+ G G +E +AIE + EN Sbjct: 428290 WELTPVAIAAGRRLSDRLFGGEPNACLHYHQIPTVVFSHPPLGTIGYTEPEAIEKFGAEN 428469 Query: 654 LEIYHTLFWPLEWTVAGRENNTCYAKIICNKFDHDRVIGFHILGPNAGEVTQGFAAAMKC 713 ++ Y + F L + +A ++ A + + + V+G H+ G A E+ QGF A+K Sbjct: 428470 VKTYSSKFVNLLYAMADPDHKGKTAMKLVTVGEDEVVVGIHVAGEGADEMIQGFGVAVKM 428649 Query: 714 GLTKQLLDDTIGIHPTCGEVFTTL 737 TK D+ + IHPT E T+ Sbjct: 428650 NATKADFDNIVAIHPTAAEELVTM 428721 >gb|GL376566.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875581352, whole genome shotgun sequence Length = 165876 Score = 145 bits (366), Expect = 2e-34 Identities = 114/360 (31%), Positives = 173/360 (48%), Gaps = 31/360 (8%) Frame = -1 Query: 409 AAQFVIATGERPRYLGIQGDKEYCITSDDLFSLPYCPGKTLVVGASYVALECAGFLAGFG 468 A +IA G +P I G KE+CI SD F L P K VVGA Y+A+E AG L G G Sbjct: 133797 AKNILIAVGGKPLIPDIPG-KEHCIDSDGFFELEVLPKKVAVVGAGYIAVELAGVLNGLG 133621 Query: 469 LDVTVMVRSI-LLRGFDQEMAEKVGSYME-QHGVKFLRKFIPVMVQQLEKGSPGKLKVLA 526 D T+ R +LR FD + + ++ + L F+ V+ + + K + Sbjct: 133620 SDTTIFCRKHGVLRTFDVSRSVLLDVHLTLMYPALNLSIFM*DSVRDMLHDAMAKDGITL 133441 Query: 527 KST----------EGTETI-------EGVYNTVLLAIGRDSCTRKIGLEKIGVKINEKSG 569 ++ +GT+T+ ++T++ A GR T + L G+K + G Sbjct: 133440 RANSNVARVELAADGTKTLALQDGSEHTGFDTIIYAAGRVPLTSSLNLSAAGIK-TDSHG 133264 Query: 570 KIPVNDVEQTNVPYVYAVGDILEDKPELTPVAIQSGKLLAQRLFGASLE---KCDYINVP 626 I V+ + T+ V+AVGD+ LTPVAI +G+ L+ RLFG K Y N+P Sbjct: 133263 FIKVDAYQATSKSNVFAVGDVC-GTTALTPVAIAAGRRLSDRLFGGERHADAKISYDNIP 133087 Query: 627 TTVFTPLEYGCCGLSEEKAIEVYKKENLEIYHTLFWPLEWTV---------AGRENNTCY 677 T VF+ G GL+E +A + Y ++ Y + F + + + A + Sbjct: 133086 TVVFSHPPIGTIGLTEIEARKKYGDAAIKTYTSRFVNMYYGLVNEVADDGKAAKPKPMTA 132907 Query: 678 AKIICNKFDHDRVIGFHILGPNAGEVTQGFAAAMKCGLTKQLLDDTIGIHPTCGEVFTTL 737 K++C D ++V+G HI+G A E+ QGF A+K G TK D+ I IHPT E T+ Sbjct: 132906 MKLVCLG-DDEKVVGLHIIGMAADEMLQGFGVAVKMGATKADFDNCIAIHPTGAEELVTM 132730 Score = 44.7 bits (104), Expect = 4e-04 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 7/69 (10%) Frame = -2 Query: 310 LGGTCVNVGCIPKKLMHQAALLGQAL-CDSRKFGWE------YNQQVRHNWETMTKAIQN 362 LGGTCVNVGC+PKK+M+ AA + L D+ +G+E + V +W + + Sbjct: 134186 LGGTCVNVGCVPKKIMYLAADMNHMLHRDAFHYGFETQDGKRIGENVSFHWNKLKERRDA 134007 Query: 363 HISSLNWGY 371 ++ LN Y Sbjct: 134006 YVLRLNGIY 133980 Score = 33.9 bits (76), Expect = 0.64 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -1 Query: 228 QKTVPNIFVNKVHVGGCDQTFQAYQSGLLQKLL 260 ++TVPN+F+NK +GG +QSG L ++L Sbjct: 104139 RRTVPNVFLNKESIGGGSDVDALFQSGKLTEML 104041 >gb|GL376629.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875582032, whole genome shotgun sequence Length = 863081 Score = 134 bits (336), Expect = 5e-31 Identities = 128/476 (26%), Positives = 208/476 (43%), Gaps = 8/476 (1%) Frame = +3 Query: 267 DYDXXXXXXXXXXXXCAKEAAILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGCIPKK-LM 325 DYD A +AA LG K ++ +GT LGGTC+NVGCIP K L+ Sbjct: 652239 DYDVVVIGGGPGGYVAAIKAAQLGLKTACIE-----SRGT---LGGTCLNVGCIPSKALL 652394 Query: 326 HQAALLGQALCDSRKFGWEYNQQVRHNWETMTKAIQNHISSLNWGYRLSLREKAVAYVNS 385 H L A D K+G E + V ++ + K+ + +L G ++ V Y+ Sbjct: 652395 HSTHLYHSAQHDFSKYGIEVSG-VSMDFGKLMKSKDKAVKTLTGGIEQLFKKNKVTYIKG 652571 Query: 386 YGEFVEHHKIKAT-NKKGQETYYTAAQFVIATGERPRYLG---IQGDKEYCITSDDLFSL 441 +G+ V ++I T N G +T +A +IATG L + + S L Sbjct: 652572 HGKIVAKNEIAVTLNDSGNQTV-SAKNILIATGSEVTPLPPVPVDNAAGKIVDSTGALEL 652748 Query: 442 PYCPGKTLVVGASYVALECAGFLAGFGLDVTVM-VRSILLRGFDQEMAEKVGSYMEQHGV 500 P +V+GA + LE G VTV+ + G D E+ ++ +++ G+ Sbjct: 652749 KKVPEHLVVIGAGVIGLELGSVYKRLGAKVTVVEYLDRVCPGLDLELGKEFTKLLKKQGL 652928 Query: 501 KFLRKFIPVMVQQLEKGSPGKLKVLAKSTEGTETIEGVYNTVLLAIGRDSCTRKIGLEKI 560 F +F + G L + TIE + VL+A GR T +GLE + Sbjct: 652929 GF--EFSTKVTASKVDGDKVTLTTEPAAGGAASTIE--CDAVLVATGRRPFTGGLGLENM 653096 Query: 561 GVKINEKSGKIPVNDVEQTNVPYVYAVGDILEDKPELTPVAIQSGKLLAQRLFGASLEKC 620 G++ +K G+I V++ +T +P ++A+GD++ P L A + G + + G Sbjct: 653097 GIQ-TDKFGRIQVDEHFRTQIPNIFAIGDVIAG-PMLAHKAEEEGIACVETIAGKH-GHV 653267 Query: 621 DYINVPTTVFTPLEYGCCGLSEEKAIEVYKKENLEIYHTLFWPLEWTVAGRENNTC--YA 678 +Y +P ++T E G +EE+ KE Y+ +P+ R Sbjct: 653268 NYNAIPGVIYTFPEVASVGKTEEQL-----KEEGVAYNVGKFPMLANSRARAVGEADGLV 653432 Query: 679 KIICNKFDHDRVIGFHILGPNAGEVTQGFAAAMKCGLTKQLLDDTIGIHPTCGEVF 734 K+I +K D+++G HI+ NAGE+ M+ G + + T HPT E F Sbjct: 653433 KVIADKAT-DKILGVHIIASNAGEMISEGVLGMEYGAASEDIARTCHAHPTLSEAF 653597 >gb|GL376560.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875581242, whole genome shotgun sequence Length = 870537 Score = 77.0 bits (188), Expect = 7e-14 Identities = 36/83 (43%), Positives = 52/83 (62%) Frame = +1 Query: 179 VVIFSKSYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFVNK 238 +V+FSKSYCP+ + KE ++LG + V ELD DG +Q L + T+Q TVPN+F+ Sbjct: 382591 LVVFSKSYCPYCKKAKEALAALGAKPYVFELDLRQDGPAIQSFLFKFTHQSTVPNVFIKG 382770 Query: 239 VHVGGCDQTFQAYQSGLLQKLLQ 261 +GG D T Y+SG L+ L+ Sbjct: 382771 KSIGGSDDTLALYKSGELKDKLK 382839 Score = 52.4 bits (124), Expect = 2e-06 Identities = 26/83 (31%), Positives = 41/83 (49%) Frame = +1 Query: 179 VVIFSKSYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFVNK 238 V IFS+ CP + ++ LFS L + + +E L +T Q T+P ++VNK Sbjct: 382288 VTIFSELNCPETKELRALFSKLKASARISPIGHSPSHPYEREALEALTGQTTLPQVYVNK 382467 Query: 239 VHVGGCDQTFQAYQSGLLQKLLQ 261 H+G + + G LQ LL+ Sbjct: 382468 QHIGRLEDVEALNKDGRLQALLE 382536 Score = 30.0 bits (66), Expect = 9.3 Identities = 28/96 (29%), Positives = 34/96 (35%) Frame = +2 Query: 52 SHARGGVGGRGERLPRGFARVVRVASEGSVRRXXXXXXXXXXXAFRFVSRPGRARSESET 111 S +R G GRG R R RR + P RARS + Sbjct: 143546 SRSRSGSRGRGGGNRRNARSRSRSRDRRPARRSSRSRSPVKSRSGSRGRSPARARSVGRS 143725 Query: 112 LERSPPQSPGPGKAGDAPNRRSGHVRGARVLSPPGR 147 RSP +SP +P+R G AR SP R Sbjct: 143726 RSRSPRRSPARSPRRSSPDRSPGGRSPAR--SPAAR 143827 >gb|GL376585.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875581789, whole genome shotgun sequence Length = 837833 Score = 59.7 bits (143), Expect = 1e-08 Identities = 27/48 (56%), Positives = 36/48 (75%) Frame = +3 Query: 179 VVIFSKSYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEIT 226 VV+FSKSYC + T+ K L LGV+ ++ELDQVDDG +Q+ L+EIT Sbjct: 173559 VVMFSKSYCQYCTKAKALLRELGVQFELIELDQVDDGDAIQDALTEIT 173702 Score = 53.9 bits (128), Expect = 6e-07 Identities = 24/53 (45%), Positives = 33/53 (62%) Frame = -1 Query: 174 IERSRVVIFSKSYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEIT 226 I + V+++SKSYCP+ T+ K L LG V+ELDQ++DG Q L IT Sbjct: 151382 IAATPVIVYSKSYCPYCTKTKALLKELGASFEVIELDQINDGDAQQSALEAIT 151224 >gb|GL376631.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875582034, whole genome shotgun sequence Length = 1169325 Score = 57.0 bits (136), Expect = 7e-08 Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 29/117 (24%) Frame = +2 Query: 173 LIERSRVVIFSKSYCPHSTRVKELFSSLGVECNVLELD---------------------- 210 L++++ VV+F + + P VK LF L V+E+D Sbjct: 1086980 LVKKTPVVVFVEQFSPPCENVKALFEDLETPFEVVEVDKERTCGCN*AW*PRCCFTC*AL 1087159 Query: 211 -------QVDDGARVQEVLSEITNQKTVPNIFVNKVHVGGCDQTFQAYQSGLLQKLL 260 Q+ DG ++Q++LS+IT T+PN+F+ HVGG Y LQ LL Sbjct: 1087160 VCVRLFMQLADGDKLQKILSDITQLDTLPNVFIKGQHVGGAQDVLDLYADNKLQALL 1087330 Score = 50.1 bits (118), Expect = 9e-06 Identities = 22/48 (45%), Positives = 30/48 (62%) Frame = +1 Query: 214 DGARVQEVLSEITNQKTVPNIFVNKVHVGGCDQTFQAYQSGLLQKLLQ 261 DGA +Q +L E+T Q+TVPN+F+ H+GG D T + L LLQ Sbjct: 1110679 DGAEIQAILLELTKQRTVPNVFIKGQHIGGADATVALHADKKLVPLLQ 1110822 Score = 43.5 bits (101), Expect = 8e-04 Identities = 18/38 (47%), Positives = 26/38 (68%) Frame = +3 Query: 174 IERSRVVIFSKSYCPHSTRVKELFSSLGVECNVLELDQ 211 I RV++F+K+YCPH RVK L + L + V+ELD+ Sbjct: 1110435 IANERVLVFAKTYCPHCARVKALLNDLKTDFEVVELDE 1110548 >gb|GL376611.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875582014, whole genome shotgun sequence Length = 494327 Score = 41.2 bits (95), Expect = 0.004 Identities = 54/245 (22%), Positives = 89/245 (36%), Gaps = 47/245 (19%) Frame = +3 Query: 267 DYDXXXXXXXXXXXXCAKEAAILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGCIPKKLMH 326 DYD CA E+A GK+V ++D +GG CV+ G IP K Sbjct: 329151 DYDLVVIGSGPSATQCAIESAKQGKRVAIVD--------KKTSVGGVCVHTGTIPSKTFR 329306 Query: 327 QAAL-------LGQALCDSRK-------------------------FGWEYNQQVRHNWE 354 +A L G L +R+ +G Y+ + + Sbjct: 329307 EAVLHLSGYRHHGYVLLPNRRY*FWCC*LR*LLFCYIRGAFAPYSFYGKSYSMKT-VTID 329483 Query: 355 TMTKAIQNHISSLNWGYRLSLREKAVAYVNSYGEFVEHHKIKATNK----KGQE------ 404 + ++ ++S + L+ V Y+ + F H+I + QE Sbjct: 329484 DILYRVKRVVNSEVDVIKAQLKAARVEYIPGFARFENDHEISIVRDPETGESQEAGEITN 329663 Query: 405 --TYYTAAQFVIATGERPRY-LGIQGDKEYCITSDDLFS--LPYCPGKTLVVGASYVALE 459 + A +F+IA G RP + + D + SD + S + P +VVGA + +E Sbjct: 329664 TVSRLRADKFLIACGTRPAHNPNVPIDGKVIFDSDQILSGDIRDLPRSLIVVGAGVIGIE 329843 Query: 460 CAGFL 464 A L Sbjct: 329844 YASML 329858 Score = 33.5 bits (75), Expect = 0.84 Identities = 37/161 (22%), Positives = 69/161 (42%), Gaps = 9/161 (5%) Frame = +2 Query: 583 YVYAVGDILEDKPELTPVAIQSGKLLA-------QRLFGASLEKCDYINVPTTVFTPLEY 635 + YAVGD + P L +++ G+L A ++L + LE +Y P ++T E Sbjct: 330512 FSYAVGDCI-GAPSLASTSMEQGRLAACHMWDQEEQLVTSQLENGNY---PYGIYTIPEI 330679 Query: 636 GCCGLSEEKAIEVYKKENLEIYHTLFWPLEWTVAGRENNTCYAKIICNKFDHD--RVIGF 693 G +E++ + + N EI + L G+ + + ++ FD ++ G Sbjct: 330680 SMVGKTEQQLTK--EGVNFEIGIAKYSEL---AKGQMSGSTAGGMLKILFDPTTLKLFGV 330844 Query: 694 HILGPNAGEVTQGFAAAMKCGLTKQLLDDTIGIHPTCGEVF 734 H +G A E+ A+ G + D + +PT E + Sbjct: 330845 HAIGEGATEIIHIGQVAIAMGCSVTYFRDAVFNYPTLAEAY 330967 Score = 31.2 bits (69), Expect = 4.2 Identities = 25/80 (31%), Positives = 30/80 (37%), Gaps = 25/80 (31%) Frame = -2 Query: 100 SRPGRARSESETLERSPPQS--------------------PGPGKAGDA-----PNRRSG 134 SRPG A++ + L SPPQS P G GDA P+R G Sbjct: 335293 SRPGSAQTGAPDLPASPPQSPRTSPRPHRVDRCS*AASLAPSSGACGDARRTPPPSRARG 335114 Query: 135 HVRGARVLSPPGRRARLSSP 154 R A P R R +P Sbjct: 335113 S*RSATAFPAPRPRQRCPTP 335054 >gb|GL376624.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875582027, whole genome shotgun sequence Length = 666937 Score = 34.7 bits (78), Expect = 0.38 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 7/78 (8%) Frame = -2 Query: 173 LIERSR----VVIFSKSYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQ-EVLSEITN 227 L+E++R +VIF+K C + KE+F E + VD R+ L +I Sbjct: 253347 LLEKTRQSKGIVIFTKPTCKYCLASKEIFKE-----REWEFEDVDVPTRLSIPTLQQIVG 253183 Query: 228 Q--KTVPNIFVNKVHVGG 243 + KTVP IF++ ++GG Sbjct: 253182 KPVKTVPQIFIDGKYIGG 253129 >gb|GL376636.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875582039, whole genome shotgun sequence Length = 1829366 Score = 32.7 bits (73), Expect = 1.4 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Frame = -1 Query: 97 RFVSRPGRARSESETLERSPPQSPGPGKAGDAPNRRSGHVRGARVLS-PPGRRARLSSPG 155 R +R +RS+S ++R+P + G P+RR H R + + S P RRA L + Sbjct: 1572080 RPTARTSCSRSDSSRIKRTPRTTTRSGTCRSRPSRRRIHTRSSALASGMPSRRASLRARR 1571901 Query: 156 P 156 P Sbjct: 1571900 P 1571898 Score = 32.7 bits (73), Expect = 1.4 Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 6/170 (3%) Frame = +1 Query: 449 LVVGASYVALECAGFLAGFGLDVTVMVRS--ILLRGFDQEMAEKVGSYMEQHGVKFLRKF 506 LV+G + LE A + L V ++ R ++ R D A+ + + + + KF Sbjct: 714133 LVIGGGLLGLEAAKAIHDLQLSVRIVNRGSRLMSRQLDDAGAKVLHN-------EIVSKF 714291 Query: 507 -IPVMVQQLEKGSPGKLKVLAKSTEGTETIEGVYNTVLLAIG---RDSCTRKIGLEKIGV 562 I V+ + K G V E+ + V+ ++ A G RD R GL+ Sbjct: 714292 GIEVLYHKTTKYIHGTTVVEGVDFTDGESYDDVF-MIVFATGIKPRDDLGRDSGLD---- 714456 Query: 563 KINEKSGKIPVNDVEQTNVPYVYAVGDILEDKPELTPVAIQSGKLLAQRL 612 + ++ G I VND+ +T+ VYA+G+ + + ++T + G +A L Sbjct: 714457 -VAQRGGGILVNDLLETSHKDVYAIGECVSHR-DVTYGLVAPGYEMADNL 714600 >gb|GL376637.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875582040, whole genome shotgun sequence Length = 493084 Score = 32.0 bits (71), Expect = 2.4 Identities = 39/157 (24%), Positives = 61/157 (38%), Gaps = 6/157 (3%) Frame = -3 Query: 332 GQALCDSRKFGWEYNQQVRHNWETMTKAIQN-HISSLNWGYRLSL-REKAVAYVNSYGEF 389 G A C S Q++R WE+MTK Q+ ++ + + + + A ++ S GE Sbjct: 450248 GNAACGS--------QRIRKPWESMTKEEQDTYVEAAGLAIKNGIVSDLAAMHIESMGEA 450093 Query: 390 VEHHKIKATNKKGQETYYTAAQFVIATGERPRYLGIQGDKEYCITSDDLFSLPYCPGKTL 449 HH ++T + ++ E YL G K C+T +PY T Sbjct: 450092 QAHHSC---------AFFTWHRRMLLAYE--SYLRDLGPKYACVT------IPYYDVHTA 449964 Query: 450 VVGASYV----ALECAGFLAGFGLDVTVMVRSILLRG 482 V A+ EC+ G G T S+ L G Sbjct: 449963 YVKAANKKCSNIYECSDIFRGIGGPTTSSQVSLTLNG 449853 >gb|GL376635.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875582038, whole genome shotgun sequence Length = 913258 Score = 32.0 bits (71), Expect = 2.4 Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 9/104 (8%) Frame = -2 Query: 39 GPMTGCGRAGDPISHARGGVGGRGERLPRGFARVVRVASEGSVRRXXXXXXXXXXXAFRF 98 G G RA DP + A GG RG+ RG RV +G A Sbjct: 118716 GGDAGRPRAADPGAAAHGGARERGQATTRGARAAGRVDGDGG----RAHHEPPHEAALGA 118549 Query: 99 VSRPGRARSE---------SETLERSPPQSPGPGKAGDAPNRRS 133 R G AR+ ++ E + P + G G++ + P R+ Sbjct: 118548 QGREGEARARGGTRGGATYQQSAEEAQPTAQGEGRSREPPRARA 118417 >gb|GL376603.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875582006, whole genome shotgun sequence Length = 1270039 Score = 31.6 bits (70), Expect = 3.2 Identities = 37/145 (25%), Positives = 54/145 (37%), Gaps = 1/145 (0%) Frame = +2 Query: 11 KRRMHLTSRPVASTHSPLILDM-CPHLNNGPMTGCGRAGDPISHARGGVGGRGERLPRGF 69 + R L + VA +++ + H + G G GR + H GG + Sbjct: 254567 RERQQLQAAGVAHDEELVVVVLVAAHPHAGASVGRGRFHPQLPHQ----GGHDQDARHVQ 254734 Query: 70 ARVVRVASEGSVRRXXXXXXXXXXXAFRFVSRPGRARSESETLERSPPQSPGPGKAGDAP 129 RVVRV +G RR A ++PG R P Q DA Sbjct: 254735 PRVVRVYCQGQARR-----GRHQRRAGHLPAQPGAGR---------PGQGAAAAAR*DAQ 254872 Query: 130 NRRSGHVRGARVLSPPGRRARLSSP 154 + R G ++ PP RRA+ +SP Sbjct: 254873 DHRDGEGHVGQI-PPPARRAQDASP 254944 >gb|GL376600.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875581988, whole genome shotgun sequence Length = 166826 Score = 31.6 bits (70), Expect = 3.2 Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 8/91 (8%) Frame = -1 Query: 66 PRGFARVVRVASEGSVRRXXXXXXXXXXXAF---RFVSRPGRARSESETLERS--PPQSP 120 PRGF + R A RR + +R R S + R P + Sbjct: 75023 PRGFQALCRAARRPGSRRSRCSSGQTCSTCTCCCYWTTRTSRCPSWTAAYARQTGPSRPA 74844 Query: 121 GPGKAGD---APNRRSGHVRGARVLSPPGRR 148 P A D + +RRSG+VRGA V +P RR Sbjct: 74843 APSSAADCSSSASRRSGNVRGAPVGAPTDRR 74751 >gb|GL376577.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875581463, whole genome shotgun sequence Length = 305633 Score = 30.8 bits (68), Expect = 5.5 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 12/67 (17%) Frame = +2 Query: 102 PGRARSESETL---ERSPPQSPGPGK---------AGDAPNRRSGHVRGARVLSPPGRRA 149 P + R + +T +RSPP++P G G RRS R L PP RR Sbjct: 14216 PSQQRKQPQTAVPGQRSPPRTPPLGSLLQR*PLPLGGGRSRRRSRCPRSPSRLPPPRRRQ 14395 Query: 150 RLSSPGP 156 L +P P Sbjct: 14396 SLPAPCP 14416 >gb|GL376573.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875581402, whole genome shotgun sequence Length = 979788 Score = 30.4 bits (67), Expect = 7.1 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +3 Query: 230 TVPNIFVNKVHVGGCDQTFQAYQSGLLQKLLQE 262 T+P ++V VGGCD +SG L +LL E Sbjct: 597660 TIPQLYVKGEFVGGCDIVTDMNKSGELSELLAE 597758 >gb|GL376638.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875582041, whole genome shotgun sequence Length = 1261388 Score = 30.0 bits (66), Expect = 9.3 Identities = 14/46 (30%), Positives = 21/46 (45%) Frame = -3 Query: 308 WGLGGTCVNVGCIPKKLMHQAALLGQALCDSRKFGWEYNQQVRHNW 353 W + VN G P H A + A C+ ++FGW + + NW Sbjct: 412497 WYVDPDTVNRGPKPMSPWHFAHVTTAAACEGKQFGWYASPSLIMNW 412360 >gb|GL376605.1| Pythium ultimum DAOM BR144 unplaced genomic scaffold scf_1117875582008, whole genome shotgun sequence Length = 1405322 Score = 30.0 bits (66), Expect = 9.3 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Frame = +1 Query: 650 KKENLEIYHTLFWPLEWTVAGRENNTCYAKIICNKFDHDRVIGFHILGPNAGEVT-QGFA 708 +K +E H F L+W GR +TC A C D + +GP G+V+ +G + Sbjct: 182272 QKWEIESIHFTFLELKWHGTGRLQSTC-AAACCTSAD----VTQRRVGPATGKVSREGAS 182436 Query: 709 AAMKC 713 +M+C Sbjct: 182437 LSMRC 182451 Database: P.ultimum/genome.fa Posted date: Feb 9, 2011 9:02 AM Number of letters in database: 42,801,618 Number of sequences in database: 82 Lambda K H 0.319 0.137 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,760,711 Number of Sequences: 82 Number of extensions: 610785 Number of successful extensions: 3690 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 3228 Number of HSP's gapped (non-prelim): 1148 length of query: 754 length of database: 14,267,206 effective HSP length: 110 effective length of query: 644 effective length of database: 14,258,186 effective search space: 9182271784 effective search space used: 9182271784 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 66 (30.0 bits)