TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000035_1.0 # Protein # Thioredoxin reductase 2 (TR2) # Homo sapiens # Complete (524 letters) Database: T.trahens/genome.fa 131 sequences; 28,680,627 total letters Searching.................................................................done Score E Sequences producing significant alignments: (bits) Value gb|GL349462.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 486 e-137 gb|GL349497.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 249 2e-66 gb|GL349487.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 228 1e-59 gb|GL349508.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 139 5e-33 gb|GL349480.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 121 1e-27 gb|GL349463.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 108 1e-23 gb|GL349444.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 97 2e-20 gb|GL349500.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 37 0.025 gb|GL349433.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 30 3.1 gb|GL349465.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 29 6.9 gb|GL349499.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 29 9.0 gb|GL349448.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 29 9.0 gb|GL349443.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 29 9.0 >gb|GL349462.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.30, whole genome shotgun sequence Length = 406747 Score = 486 bits (1250), Expect = e-137 Identities = 250/487 (51%), Positives = 323/487 (66%), Gaps = 1/487 (0%) Frame = -1 Query: 39 DYDXXXXXXXXXXXACAKEAAQLGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMH 98 DYD +CA++AA+LG KVA++D+V+PSPQGT WGLGGTCVNVGCIPKKLMH Sbjct: 25558 DYDLVVVGGGSGGLSCARQAAKLGAKVAILDFVKPSPQGTAWGLGGTCVNVGCIPKKLMH 25379 Query: 99 QAALLGGLIQDAPNYGWEVAQPVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK 158 AALL G DA YGW V + H W + +AV +H+ SLNWG+R L+D + Y N Sbjct: 25378 TAALLKGAADDAKAYGWSVPDGLEHSWDTLVDAVGSHIGSLNWGYRTALRDEGIDYKNEL 25199 Query: 159 ASFVDEHTVCGVAKGGKEILLSADHIIIATGGRPRYPTHIEGALEYGITSDDIFWLKESP 218 S VD HTV GV++ E L SA +I+IA GGRP P + GALE+ ITSDDIFW + P Sbjct: 25198 GSIVDAHTVKGVSRKKVETLYSAKYIVIAVGGRPYVPEDVPGALEHAITSDDIFWRFDPP 25019 Query: 219 GKTLVVGASYVALECAGFLTGIGLDTTIMMRSIPLRGFDQQMSSMVIEHMASHGTRFLRG 278 GKTL VGASYVALE AGFLTG+G DTT+ +RSI LRGFDQ M+ V ++M GT F R Sbjct: 25018 GKTLCVGASYVALEIAGFLTGLGYDTTVAVRSILLRGFDQGMAEKVGKYMEHEGTTFKRP 24839 Query: 279 CAPSRVRR-LPDGQLQVTWEDSTTGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTSPD 337 + + G+L+V + T G + +DTVL+A GR DT +L LE G+ Sbjct: 24838 VVVDSIAKDEASGKLKVVLKSRTDGTTEEEEYDTVLFATGRKADTANLGLENVGIVPDAK 24659 Query: 338 TQKILVDSREATSVPHIYAIGDVVEGRPELTPIAIMAGRLLVQRLFGGSSDLMDYDNVPT 397 T KI VD EAT V I+A+GDV++ + ELTP+AI AGRLL RLF G + LM+Y N+PT Sbjct: 24658 TGKIAVDEAEATCVDSIFALGDVID-QLELTPVAIAAGRLLASRLFDGKTTLMNYTNIPT 24482 Query: 398 TVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHYKPLEFTVAGRDASQCYVKMVCLREPP 457 VFTPLEYG VGLSEE+A A +G +++EV+H + + LE TV R+ +Q Y K++ +R+ Sbjct: 24481 AVFTPLEYGAVGLSEEDAAAEYGIDNIEVFHTYPQVLEHTVPHREENQVYAKLI-VRKAD 24305 Query: 458 QLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMRTVGIHPTCSEEVVKLRISKRSGLDP 517 +V+G+H+ GPNAGEV QG + + GA+ A TVGIHPT +EE + I++ SG Sbjct: 24304 DVVIGVHYAGPNAGEVIQGLGIAVMAGATKAMFDATVGIHPTIAEEFTSMEITRASGKSA 24125 Query: 518 TVTGCUG 524 TGC G Sbjct: 24124 LRTGC*G 24104 >gb|GL349497.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.65, whole genome shotgun sequence Length = 192353 Score = 249 bits (637), Expect = 2e-66 Identities = 176/487 (36%), Positives = 251/487 (51%), Gaps = 8/487 (1%) Frame = +2 Query: 39 DYDXXXXXXXXXXXACAKEAAQLGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMH 98 +YD A+ AA+ G +VAVV+ + LGGTCVNVGC+PKK+M Sbjct: 103451 EYDLVVIGGGSGGMGLARRAAEYGARVAVVE---------KDRLGGTCVNVGCVPKKVMW 103603 Query: 99 QAALLGGLIQDAPNYGWEVA-QPVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNI 157 AA L + P YG V+ + + DW + +V LN + L ++Y Sbjct: 103604 NAANLASTLGYMPGYGLGVSKEALALDWPTLKANRDAYVARLNGIYERNLAKANIEYVVG 103783 Query: 158 KASFVDEHTVCGVAKGGKEILLSADHIIIATGGRPRYPTHIEGALEYGITSDDIFWLKES 217 AS + V A G L A H+ IATGG P P + G E+ ITSD F L+E+ Sbjct: 103784 SASVAGKGLVAVTAADGSVTELKAPHVAIATGGYPCIPPEMVGG-EHVITSDGFFELEEA 103960 Query: 218 PGKTLVVGASYVALECAGFLTGIGLDTTIMMRS-IPLRGFDQQMSSMVIEHMASHGTRFL 276 P K ++GA Y+A+E AG L +G + + +R LR FD + + + + H L Sbjct: 103961 PAKAAIIGAGYIAVELAGVLAELGTEVHLYVRKHAALRAFDADVVESLTDAL-EHSGIIL 104137 Query: 277 RGCAP--SRVRRLPDGQLQVTWEDSTTGK--EDTGTFDTVLWAIGRVPDTRSLNLEKAGV 332 +P S + G+L VT T G+ E FD + AIGR P+T L L + GV Sbjct: 104138 HTFSPIGSVAKDEVSGKLTVT----TAGENVEVIDGFDVAVAAIGRCPNTDGLGLAELGV 104305 Query: 333 DTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPIAIMAGRLLVQRLFGGSSDL-MD 391 D+ I+VD + TSV +YA+GDV R +LTP+AI AGR L RLF G + MD Sbjct: 104306 AVQ-DSGHIVVDDFQNTSVEGVYALGDVCNKRVDLTPVAIAAGRKLAARLFKGDATAKMD 104482 Query: 392 YDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHYKPLEFTVAGRDASQCYVKMV 451 Y NV T VF+ G VGL+E EA + G + V + + + + F G D + +K+V Sbjct: 104483 YTNVATVVFSHPPIGTVGLTEAEAREQFGDDAVTTFRSRFTNM-FYAMGDDKPKTMMKLV 104659 Query: 452 CLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMRTVGIHPTCSEEVVKLR-IS 510 C+ + + V G+H LG A E+ QGFA+ +K GA+ A + T IHPT +EE+V +R + Sbjct: 104660 CVGDEHR-VAGIHILGLGADEIIQGFAVAVKMGATKADLDATCAIHPTAAEELVTMR*MR 104836 Query: 511 KRSGLDP 517 G+ P Sbjct: 104837 NERGVSP 104857 >gb|GL349487.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.55, whole genome shotgun sequence Length = 273410 Score = 228 bits (580), Expect = 1e-59 Identities = 165/493 (33%), Positives = 241/493 (48%), Gaps = 23/493 (4%) Frame = +2 Query: 39 DYDXXXXXXXXXXXACAKEAAQLGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMH 98 +YD A A+ AA+ G +V + + G R LGGTCVNVGC+PKK+ Sbjct: 156761 EYDLAVLGGGSGGLATARRAAEHGARVVLAE-------GGR--LGGTCVNVGCVPKKVTW 156913 Query: 99 QAA-LLGGLIQDAPNYGWEVAQPVPHDWRKMAEAVQNH----------VKSLNWGHRVQL 147 +A L D +G P D R EA ++ V+ LN + L Sbjct: 156914 EAVNTLEAANHDLGAFG---GYSGPDDARSHVEAKIHYPTLKARRDAYVERLNGIYASAL 157084 Query: 148 QDRKVKYFNIKASFVDEHT-------VCGVAKGGKEILLSADHIIIATGGRPRYPTHIEG 200 ++ +I D V GV + SA ++IATG P +P + G Sbjct: 157085 KNAGGSGGSIDILREDARLWKDSDGHVAGVEGKETGTVASASSVVIATGSTPLFPASVAG 157264 Query: 201 ALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRSIP-LRGFDQQ 259 A E G SD F + P VVG Y+A+E AG L +G +TT+++R LR D Q Sbjct: 157265 AAELGSDSDAFFTWSKPPASVAVVGGGYIAVELAGMLAALGSETTMLVRGPQVLRHIDPQ 157444 Query: 260 MSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDTVLWAIGRV 319 ++ ++ + S G S V + DG L+V D+ + G +D VL+A GR Sbjct: 157445 IADVLHSQLTSAGVDLRLNTGVSAVTKGSDGLLEVASPDA---QLPLGMWDKVLFATGRA 157615 Query: 320 PDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPIAIMAGRLLV 379 P T+ L L AG++ + D I+VD TS+PH++AIGDV +LTP+AI AGR L Sbjct: 157616 PLTQGLGLRDAGIELN-DAGAIVVDPHHQTSIPHVFAIGDVANTPGDLTPVAIKAGRTLA 157792 Query: 380 QRLF---GGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHYKPLEF 436 + LF + +DY +PT +FT G VGLSE EAVA+ G + V+VY A + L + Sbjct: 157793 EWLFNPAAAGAPPLDYATIPTVMFTHPPIGSVGLSEAEAVAKFGADAVKVYSASFTNLFY 157972 Query: 437 TV-AGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMRTVG 495 + D +++V + VLG+H +G E+ QGF + + GA+ A + T+ Sbjct: 157973 GLHEPADKQPTLMRIVVNTADSERVLGIHGIGRGMDEIMQGFGVAVTMGATKADLDATIA 158152 Query: 496 IHPTCSEEVVKLR 508 IHPT EE+V +R Sbjct: 158153 IHPTAGEELVTMR 158191 >gb|GL349508.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.76, whole genome shotgun sequence Length = 62085 Score = 139 bits (350), Expect = 5e-33 Identities = 133/465 (28%), Positives = 201/465 (43%), Gaps = 7/465 (1%) Frame = +3 Query: 37 QRDYDXXXXXXXXXXXACAKEAAQLGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKL 96 +R YD + A AA+LG +VA++ + GT +GGTCVNVGC+P K Sbjct: 46224 RRTYDLAVIGAGSAGFSAAITAAELGARVALIGH------GT---IGGTCVNVGCVPSKT 46376 Query: 97 MHQAALLGGLIQDAPNYGWEVAQPVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFN 156 + +AA + A + A+ DW V +L R+ KY + Sbjct: 46377 LIRAAETLHQGRAAERFAGIEARVGLTDWSATVSQKDELVGAL----------RQAKYKD 46526 Query: 157 IKASFVDEHTVCGVAKGGKEIL------LSADHIIIATGGRPRYPTHIEGALEYG-ITSD 209 + A++ V G A+ + + L A ++I TG RP P+ I G E +TS Sbjct: 46527 LLAAYEGITYVEGRARLATDGVLVEGEPLRAGKVVITTGARPALPS-IPGIEEVSYLTST 46703 Query: 210 DIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRSIPLRGFDQQMSSMVIEHMA 269 + + E P L++G Y+ E A G++ TI R L + ++ + + + Sbjct: 46704 TVLEIAELPRSLLIIGGGYIGCELAQLFARAGVEVTIACRRGLLPAAEPEVGTALTGYFE 46883 Query: 270 SHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDTVLWAIGRVPDTRSLNLEK 329 G R G ++R DG V G + + VL A GR P+T + L + Sbjct: 46884 DEGIRVRSGLKYRQIRETEDG---VILNALAEGNDVRLEAERVLIASGRRPNTEEMGLAE 47054 Query: 330 AGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPIAIMAGRLLVQRLFGGSSDL 389 AGV P+ I VD R T+ IYA GDV GR + +A A RL + G S Sbjct: 47055 AGVVLLPN-GGIEVDERLRTTKAGIYAAGDVT-GRDQFVYMAAYAARLAAENALNGDSRR 47228 Query: 390 MDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHYKPLEFTVAGRDASQCYVK 449 D +P VFT + VGL+ EA A V+ + +A RD ++ +K Sbjct: 47229 YDNAAMPAVVFTDPQVASVGLT--EAAAGQAGHRVKTSLLSLDQVPRALAARD-TRGLIK 47399 Query: 450 MVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMRTV 494 +V E +L LG H L P + Q L IK G + A++ T+ Sbjct: 47400 LVAEEETDRL-LGAHILAPEGADSIQTAVLAIKHGLTVAELAETI 47531 Score = 128 bits (322), Expect = 8e-30 Identities = 118/457 (25%), Positives = 191/457 (41%), Gaps = 4/457 (0%) Frame = +1 Query: 55 AKEAAQLGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYG 114 A G VA+VD GGTC GC PKK++ + A + + +G Sbjct: 47971 ASRCRNAGWSVAIVD---------ERPFGGTCALRGCDPKKVLRRTAEVVDAARLMNGHG 48123 Query: 115 WEVAQPVPH-DWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKG 173 + P P DW + ++ + D+ + F A F+ E+T+ Sbjct: 48124 --ITGPAPTVDWPALMAFKRSFTDPVPNAREKAFADKGIATFKGTAQFIGENTI-----S 48282 Query: 174 GKEILLSADHIIIATGGRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALEC 233 E L A +I+I +G +P P + GA E+ ITSDD L+ P + L++G YV+ E Sbjct: 48283 VGEDRLEARYIVITSGAKP-VPLSMPGA-EHVITSDDFLELEALPKRVLLIGGGYVSFEF 48456 Query: 234 AGFLTGIGLDTTIMMRSI-PLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQL 292 A G + ++ R PL+ FD + M+++ + G F + + + G Sbjct: 48457 AHIAARAGAEVVMVDRGERPLKAFDPDLVDMLVDRTRALGITFRAKAEVTAIEQANGGLG 48636 Query: 293 QVTWEDSTTGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVP 352 + D G E+ D V+ GR +L +KA V ++ + T+ P Sbjct: 48637 VIARID---GAEERFEADLVVHGAGRAAAISALEPDKANVKADGTGVEVNEYLQSLTN-P 48804 Query: 353 HIYAIGDVVE-GRPELTPIAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLS 411 +YA GD P LTP+A + + + L G+ DY VP+ VFT E VGLS Sbjct: 48805 AVYAAGDAAATAGPPLTPVASLEAKAVAANLLEGNHATPDYTGVPSAVFTVPELVRVGLS 48984 Query: 412 EEEAVARHGQEHVEVYHAHYKPLEFTVAGRDASQCY-VKMVCLREPPQLVLGLHFLGPNA 470 E +A A+ G E + + + + R + + V + +LG H LGP A Sbjct: 48985 EADATAQ-GLE----FECKFSDMRGWFSVRRVGETHAAAKVLVEHGSGRILGAHILGPEA 49149 Query: 471 GEVTQGFALGIKCGASYAQVMRTVGIHPTCSEEVVKL 507 E F L ++ G + V +P+ ++ L Sbjct: 49150 SETINLFGLAMRTGLKAEDLKGLVSAYPSAGSDIGSL 49260 >gb|GL349480.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.48, whole genome shotgun sequence Length = 315632 Score = 121 bits (303), Expect = 1e-27 Identities = 121/435 (27%), Positives = 186/435 (42%), Gaps = 15/435 (3%) Frame = +2 Query: 83 GGTCVNVGCIPKKLM----HQAALLGGLIQD----APNYGWEVAQPVPHDWRKMAEAVQN 134 GGTC+NVGCIP K + H L G ++ P G + D KM E+ Q Sbjct: 131336 GGTCLNVGCIPSKNLLHTTHLYHLSKGYFEEHGIVVPGEGTSI------DVAKMMESKQE 131497 Query: 135 HVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSADHIIIATGGRPRY 194 V +L G + V Y + V G + ++ A I+IATG P Sbjct: 131498 AVTTLTRGIEGLFKKNGVTYSQGWGKITSPNEVTVDLNDGGQEVIPAKKIVIATGSDPIE 131677 Query: 195 PTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIM--MRSIP 252 + + ++S L+E P K V+G + LE +G + T++ M +I Sbjct: 131678 LPFMPYDEKKVVSSTGALALEEVPKKMAVIGGGVIGLELGSVWARLGAEVTVIEFMPAIG 131857 Query: 253 LRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDTV 312 G D +++ + G +F+ + DG + T E + GK + D Sbjct: 131858 A-GMDAEIAKNFQRILKRQGLKFMTSTKVTGADTSGDGVVIHT-EAAKGGKAKSLDVDVA 132031 Query: 313 LWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPIAI 372 L ++GR L LE GV T + +L D T+VP IYAIGDV +G L A Sbjct: 132032 LVSVGRRRFIDGLGLEDVGVATD-ERGMVLTDENFQTNVPSIYAIGDVRDGAM-LAHKAE 132205 Query: 373 MAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHYK 432 G +L + F G +DY+++P+ ++T E VG +EEE +E Y+ Sbjct: 132206 EEGVVLAEA-FHGEGFALDYNSIPSVIYTSPEVAWVGKNEEEL-----KEAGVAYNVGTF 132367 Query: 433 PLEFTVAGRDASQC-----YVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASY 487 P+ A A C +K++ +E +LG+H + +A E+ LG+ GAS Sbjct: 132368 PM---AANSRAKACGYADGMIKVIADKET-DAILGVHLIAESASELIPEAVLGVAFGASS 132535 Query: 488 AQVMRTVGIHPTCSE 502 + T HPT SE Sbjct: 132536 EDIAMTCHAHPTQSE 132580 >gb|GL349463.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.31, whole genome shotgun sequence Length = 395032 Score = 108 bits (269), Expect = 1e-23 Identities = 140/503 (27%), Positives = 214/503 (42%), Gaps = 35/503 (6%) Frame = -1 Query: 54 CAKEAAQLGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAAL-LGGLIQDAPN 112 CA AA+ G++VAVVD +GG CV+ G IP K +A L L G + Sbjct: 275545 CAIAAAKKGKRVAVVD--------AEADIGGVCVHTGTIPSKTFREAILHLTGYRNQSFY 275390 Query: 113 YGWEVAQPVPHDWRKMAEAVQNHVKS-LNWGHRV---QLQDRKVKYFNIKASFVDEHTVC 168 G +A+ + + N VK+ ++ H + QL + ASFVD +TV Sbjct: 275389 TGSSLARKTV-----TVKDIVNRVKAVIDKEHAIVSSQLLRNHIDIIPGHASFVDSNTVA 275225 Query: 169 GVAKGGKEI---------------------LLSADHIIIATGGRPRYPTHIEGALEYGIT 207 + K + ++AD +++ G RP P HI + Sbjct: 275224 -IGKPWSHLPDRRARLNAMEGFSVTSDEKRRVTADKFLLSVGTRPARPGHIPFEAKQVFD 275048 Query: 208 SDDIF---WLKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRSIP---LRGFDQQMS 261 SD++ W+ P +VVGA + +E A + I ++ P L D +M Sbjct: 275047 SDEMLIDDWV--IPRTLIVVGAGVIGMEYASMMNIIPGSRVYVVDQRPTQILPFADTEMV 274874 Query: 262 SMVIEHMASHGTRFLRGCAPSR--VRRLPDGQLQVTWEDSTTGKEDTGTFDTVLWAIGRV 319 + M G RFL G S V DG+ VT E +GK G D +L+A+GR Sbjct: 274873 EALCHLMRQQGARFLLGETVSSCDVTVRSDGRETVTVE-LASGKVLFG--DALLYAVGRQ 274703 Query: 320 PDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPIAIMAGRLLV 379 +T SLNL G++T I VD + TSV H+YA GD + G P L ++ GRL+ Sbjct: 274702 ANTDSLNLSAIGLETD-KRGLISVDDKFMTSVGHVYAAGDCI-GFPALASVSGQQGRLVA 274529 Query: 380 QRLFGGSSDLMD-YDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHYKPLEFTV 438 +F +D ++ + P ++T E +G+SE E A Q VEV A Y L + Sbjct: 274528 DYMFDDITDRVETQGDFPYGIYTVPELSFIGMSERELTA--AQIPVEVGLASYAELAKS- 274358 Query: 439 AGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMRTVGIHP 498 A S +K++ +L LG +G A E+ + + + V +P Sbjct: 274357 AMIGGSYGLLKLLFCPHTFRL-LGASAIGEGATEIIHVAQTAMALNGTIDLFLTQVFNYP 274181 Query: 499 TCSEEVVKLRISKRSGLDPTVTG 521 + SE R++ +GL G Sbjct: 274180 SYSE---AFRVAALNGLGRVARG 274121 >gb|GL349444.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.12, whole genome shotgun sequence Length = 562821 Score = 97.4 bits (241), Expect = 2e-20 Identities = 119/449 (26%), Positives = 198/449 (44%), Gaps = 12/449 (2%) Frame = -2 Query: 83 GGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPVPHDWRKMAE---AVQNHVKSL 139 GG C+NVGC+P K + A ++A YG V V D+ ++ E ++ + + Sbjct: 90254 GGDCLNVGCVPSKALIAAGHAAYRARNAHEYGVTV-DSVSVDFGQIMERMREIRAEISAD 90078 Query: 140 NWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSADHIIIATGGRPRYPTHIE 199 + HR L++ V F + F+D ++ ++L+ IATGGRP P +I Sbjct: 90077 DSAHR--LKENGVDVFFGRGKFIDAKSI-----EVNGVVLNFKRACIATGGRPGIP-NIP 89922 Query: 200 GALE-YGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRSIPLRGFDQ 258 G E +T+ +F L E P + V+G + E A G + RS + ++ Sbjct: 89921 GLAEAEPLTNLSVFNLTELPSRLAVIGTGPIGCELAQTFARFGSLVVLTGRSGSILRNEE 89742 Query: 259 QMSSMVIE-HMASHGTRFLRGCAPSRVRRLPDG--QLQVTWEDSTTGKEDTGTFDTVLWA 315 +++V++ + + G VR P+ ++ V ED + + D +L A Sbjct: 89741 PDAAVVLQAQLEAEGVDLRLNLEYISVRTDPETGVKILVVREDGADVETEI-VVDEILVA 89565 Query: 316 IGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPIAIMAG 375 GR P+ +L LE AG++ SP I V+ T+ +YA GDV + T +A Sbjct: 89564 AGRKPNVDNLGLEAAGIEYSP-LHGIAVNDSLQTTNSSVYACGDVASSF-QFTHMADAMA 89391 Query: 376 RLLVQR-LFGGSSDLMDYDNVPTTVFTPLEYGCVGLSE---EEAVARHGQEHVEVYHAHY 431 R++++ LF GS+ + D VP +T E VGL E E A A + E+ H Sbjct: 89390 RIVIRNALFFGSAKVTDL-VVPWCTYTYPEVAHVGLYERDLERAGASYTVWKRELAHNDR 89214 Query: 432 KPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVM 491 E AG +VK + +LG + AGE+ F + IK ++ Sbjct: 89213 ALCESETAG------FVK--AFTDAKGRILGATIVAEKAGEMISEFTIAIKHKIPLGELG 89058 Query: 492 RTVGIHPTCSEEVVKL-RISKRSGLDPTV 519 + +PT + E+ +L + R+ L P V Sbjct: 89057 NVIHPYPTQAFEIKRLGDDANRARLTPLV 88971 >gb|GL349500.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.68, whole genome shotgun sequence Length = 140327 Score = 37.4 bits (85), Expect = 0.025 Identities = 49/180 (27%), Positives = 72/180 (40%), Gaps = 15/180 (8%) Frame = -2 Query: 220 KTLVVGASYVALECAGFLTGIGLDTTIMMRSIPLRGFDQQMSSMVIEHMASHGTRFLRGC 279 +T +VGA ++ LE A L G+D ++ + Q M M E + TR G Sbjct: 21259 RTGIVGAGFIGLELADALVASGVDVVLLEYA------PQIMPPMDREMADALQTRIEGGS 21098 Query: 280 APSRVRRLPDGQLQVTWEDS------TTGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVD 333 + + DG + S T + D V+ A+G S AG+ Sbjct: 21097 GDALFVAVGDGVIGFRSRTSGHPLEILTAGHEAYPCDLVVVAVG--VKAESGLARDAGIA 20924 Query: 334 TSPDTQKILVDSREATSVPHIYAIGDVVE------GRP---ELTPIAIMAGRLLVQRLFG 384 I VD+ TS P ++A+GDVVE GRP L A AGR++ + G Sbjct: 20923 LGA-RGAIAVDASFRTSDPRVFAVGDVVETADRVTGRPMSLALAGPANRAGRIVADTIVG 20747 >gb|GL349433.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.1, whole genome shotgun sequence Length = 716227 Score = 30.4 bits (67), Expect = 3.1 Identities = 25/77 (32%), Positives = 37/77 (48%) Frame = +2 Query: 122 PHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSA 181 P +W K+ E V +H+ +GHR+ + +KV F ++ VDE C V G+ Sbjct: 312203 PREWGKV-EVVIDHL----YGHRLAVGPKKVIDFGELSNLVDEWN-CDVFAIGQ------ 312346 Query: 182 DHIIIATGGRPRYPTHI 198 TGGRP Y T + Sbjct: 312347 -----LTGGRPLYYTAV 312382 Score = 29.3 bits (64), Expect = 6.9 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Frame = -3 Query: 268 MASHGTRFLRGCAPSRVRRLPDGQLQVT--WEDSTTGKE 304 +A TR+ GCAP+R R P G T W S + E Sbjct: 228059 LACSVTRYAAGCAPTRTRSCPTGATTCTLGWPKSMSSTE 227943 >gb|GL349465.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.33, whole genome shotgun sequence Length = 407772 Score = 29.3 bits (64), Expect = 6.9 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Frame = -2 Query: 109 DAPNYGWEVA-QPVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTV 167 D P G A +P P + AV+ SL GHR L+DR ++ + VDEH + Sbjct: 119288 DRPPRGRRPAGRPAP*PHGRSRHAVEPRRNSLALGHRPVLRDR*EL---LEGTSVDEHQL 119118 Query: 168 CGVAKGGKEI 177 G G+++ Sbjct: 119117 HGARSAGQQV 119088 >gb|GL349499.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.67, whole genome shotgun sequence Length = 163634 Score = 28.9 bits (63), Expect = 9.0 Identities = 18/60 (30%), Positives = 32/60 (53%) Frame = -2 Query: 105 GLIQDAPNYGWEVAQPVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDE 164 G + D +G E+ V W EA++ ++SL VQL + K+K+ ++ A+ V+E Sbjct: 94711 GELIDGDGFG-EIVADVHGQWFGPCEAMERVMRSLF----VQLANDKIKFISVNAAMVEE 94547 >gb|GL349448.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.16, whole genome shotgun sequence Length = 538444 Score = 28.9 bits (63), Expect = 9.0 Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 11/122 (9%) Frame = +2 Query: 383 FGGSS------DLMDYDNVP-----TTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHY 431 +GG S L+ D VP T+ P EY CVG+ AVA H Sbjct: 167420 YGGESAFRIMAKLLIDDGVPDRGHRATMLDP-EYACVGI----AVASH------------ 167548 Query: 432 KPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVM 491 P+ TVA + + + + + PP L+ L PNA +G G C +++ Sbjct: 167549 -PVYNTVAVFEFAAVFEDALAIAPPPSLLSDPTCLTPNAAPPDEG--TGPPCAGCGERIV 167719 Query: 492 RT 493 RT Sbjct: 167720 RT 167725 >gb|GL349443.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.11, whole genome shotgun sequence Length = 571036 Score = 28.9 bits (63), Expect = 9.0 Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 12/115 (10%) Frame = +3 Query: 324 SLNLEKAGVDTSP-DTQ--KILVDSREATSVPHIYAIGDV-----VEGRPELTPIAIMAG 375 S +L +AG D + D+Q L + E SVP + + + G LTP+ + G Sbjct: 23181 STDLVRAGADVAARDSQGDTPLHAAVELGSVPLVRLLLEAGAPATAAGHGGLTPLHLAVG 23360 Query: 376 R----LLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEV 426 R ++ L GG D + T TPL Y VGL R+ ++ +EV Sbjct: 23361 RNRDAIVAMLLSGGRICERDINASDETGATPLHYALVGL----LAGRNNEDEIEV 23513 Database: T.trahens/genome.fa Posted date: Feb 9, 2011 9:02 AM Number of letters in database: 28,680,627 Number of sequences in database: 131 Lambda K H 0.320 0.137 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,721,735 Number of Sequences: 131 Number of extensions: 428838 Number of successful extensions: 2214 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 2021 Number of HSP's gapped (non-prelim): 560 length of query: 524 length of database: 9,560,209 effective HSP length: 104 effective length of query: 420 effective length of database: 9,546,585 effective search space: 4009565700 effective search space used: 4009565700 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 63 (28.9 bits)