TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000035_1.0 # Protein # Thioredoxin reductase 2 (TR2) #
Homo sapiens # Complete
         (524 letters)

Database: A.taiwanensis/genome.fa 
           5379 sequences; 6,149,411 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJQ01000989.1| Ascogregarina taiwanensis Contig1141, whole g...    51   4e-07
gb|ABJQ01004901.1| Ascogregarina taiwanensis CLRanP104-A09.b1.ab...    50   8e-07
gb|ABJQ01002854.1| Ascogregarina taiwanensis Contig3175, whole g...    28   3.4  
gb|ABJQ01000395.1| Ascogregarina taiwanensis Contig486, whole ge...    27   4.4  
gb|ABJQ01000142.1| Ascogregarina taiwanensis Contig170, whole ge...    27   7.6  
gb|ABJQ01002291.1| Ascogregarina taiwanensis Contig2586, whole g...    26   9.9  

>gb|ABJQ01000989.1| Ascogregarina taiwanensis Contig1141, whole genome shotgun sequence
          Length = 858

 Score = 50.8 bits (120), Expect = 4e-07
 Identities = 26/74 (35%), Positives = 41/74 (55%)
 Frame = -2

Query: 446 CYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMRTVGIHPTCSEEVV 505
           C VK+VC +    LV+G H +GP+AGE+TQG+AL ++ GA+   +  ++   P  S    
Sbjct: 845 CLVKLVCRKSQNLLVVGFHCVGPHAGELTQGYALALQLGATKVSMNVSLWFTPEHSRSSY 666

Query: 506 KLRISKRSGLDPTV 519
                 R G++  V
Sbjct: 665 CTDQRTRGGINTRV 624


>gb|ABJQ01004901.1| Ascogregarina taiwanensis CLRanP104-A09.b1.ab1, whole genome
           shotgun sequence
          Length = 775

 Score = 49.7 bits (117), Expect = 8e-07
 Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
 Frame = -1

Query: 377 LLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHYKPLEF 436
           + V     G    ++Y+ +P+ V+T  E   VG +EE+  A    E +E     YK   F
Sbjct: 667 IAVAETVAGLGGHVNYEAIPSVVYTHPEVAGVGKTEEQLKA----EGIE-----YKKGTF 515

Query: 437 TVAGR------DASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQV 490
             A        D  +  VK++  +   + +LG   +GP AG++ Q   LG++ GAS   +
Sbjct: 514 PFAANSRARTNDDFEGNVKVLTEKSTDK-ILGAWIIGPQAGDLIQELVLGMEYGASSEDI 338

Query: 491 MRTVGIHPTCSEEV 504
            RT   HP  +E V
Sbjct: 337 ARTTHAHPALAEAV 296


>gb|ABJQ01002854.1| Ascogregarina taiwanensis Contig3175, whole genome shotgun sequence
          Length = 1882

 Score = 27.7 bits (60), Expect = 3.4
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = -1

Query: 285  RRLPDGQLQVTWEDSTTGKEDTGTFD---TVLWAIGR 318
            R+  DG +  TW++STT   D GT D    + W +GR
Sbjct: 1135 RQQSDGTM--TWDNSTTFSADAGTADEGHPLRWRLGR 1031


>gb|ABJQ01000395.1| Ascogregarina taiwanensis Contig486, whole genome shotgun sequence
          Length = 1415

 Score = 27.3 bits (59), Expect = 4.4
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -2

Query: 240  IGLDTTIMMRSIPLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLP 288
            +G+   + + ++P R    Q+      H+AS G   +R C P   R+LP
Sbjct: 1270 VGIACNLSLCTLP*RPLLSQLLQSPPVHVASSGFPDIRSCRPVIYRKLP 1124


>gb|ABJQ01000142.1| Ascogregarina taiwanensis Contig170, whole genome shotgun sequence
          Length = 816

 Score = 26.6 bits (57), Expect = 7.6
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = -1

Query: 346 REATSVPHIYAIGDVVEGRPELTPIAIMAGR 376
           REAT+V H    G V  GRP   P A  AGR
Sbjct: 360 REATAVGHSVGQGPVALGRPGGDPGARGAGR 268


>gb|ABJQ01002291.1| Ascogregarina taiwanensis Contig2586, whole genome shotgun sequence
          Length = 1925

 Score = 26.2 bits (56), Expect = 9.9
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -2

Query: 282 SRVRRLPDGQLQVTWEDSTTGKEDT 306
           SRVRRLP+G LQ T E     +E T
Sbjct: 316 SRVRRLPNGDLQPTDEALLLREETT 242


  Database: A.taiwanensis/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 6,149,411
  Number of sequences in database:  5379
  
Lambda     K      H
   0.320    0.137    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,978,727
Number of Sequences: 5379
Number of extensions: 58562
Number of successful extensions: 219
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of query: 524
length of database: 2,049,803
effective HSP length: 91
effective length of query: 433
effective length of database: 1,560,314
effective search space: 675615962
effective search space used: 675615962
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)