TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fep15_sal selenoprotein [Salmo salar] (137 letters) Database: E.siliculosus/genome.fa 35 sequences; 195,934,119 total letters Searching...................................done Score E Sequences producing significant alignments: (bits) Value emb|FN649747.1| Ectocarpus siliculosus strain Ec 32, whole genom... 30 2.4 emb|FN649726.1| Ectocarpus siliculosus strain Ec 32, whole genom... 29 5.5 emb|FN649739.1| Ectocarpus siliculosus strain Ec 32, whole genom... 29 5.5 emb|FN649756.1| Ectocarpus siliculosus strain Ec 32, whole genom... 29 5.5 emb|FN649760.1| Ectocarpus siliculosus strain Ec 32, whole genom... 28 7.1 emb|FN649731.1| Ectocarpus siliculosus strain Ec 32, whole genom... 28 9.3 emb|FN649736.1| Ectocarpus siliculosus strain Ec 32, whole genom... 28 9.3 emb|FN649740.1| Ectocarpus siliculosus strain Ec 32, whole genom... 28 9.3 >emb|FN649747.1| Ectocarpus siliculosus strain Ec 32, whole genome shotgun sequence assembly, chromosome LG22 Length = 2337862 Score = 30.0 bits (66), Expect = 2.4 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = -2 Query: 91 TVPVKKMKVDEISSLLDSLGFYKRSQKGEEVPEE 124 TV K++VD IS LDS+GF GE+VP + Sbjct: 101238 TVHDCKLRVDGISKYLDSVGFRFDHAFGEDVPNQ 101137 >emb|FN649726.1| Ectocarpus siliculosus strain Ec 32, whole genome shotgun sequence assembly, chromosome LG01 Length = 3745584 Score = 28.9 bits (63), Expect = 5.5 Identities = 15/43 (34%), Positives = 25/43 (58%) Frame = +2 Query: 74 EKNPRLIFYDDKDEVVQTVPVKKMKVDEISSLLDSLGFYKRSQ 116 E + FY + +V QTV + +V+E++SLL S +RS+ Sbjct: 1680713 EATQKSAFYSFERKVEQTVDIFNAQVEEVTSLLTSTATGRRSR 1680841 >emb|FN649739.1| Ectocarpus siliculosus strain Ec 32, whole genome shotgun sequence assembly, chromosome LG14 Length = 3614499 Score = 28.9 bits (63), Expect = 5.5 Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 7/115 (6%) Frame = -3 Query: 1 MWAFLLLTLAFSATGMTEEDVTDTAIEERPVIAKGILKAPSVV------GUAIKKMPALY 54 +WAF L A ++ D + + +P + GIL PSVV I+ + Sbjct: 63298 LWAFSFLASHACALTTSKADSESASKKRKPCGSVGILLRPSVVYAGIAFSGRIRPRAGVL 63119 Query: 55 MFLMERWALYHNLEYDSGEEKNPRLIFYD-DKDEVVQTVPVKKMKVDEISSLLDS 108 + L+ RW ++ + + L F+ ++ EV Q +D IS DS Sbjct: 63118 ICLLHRWNRRNSRQGKDNAVRTSGLRFFSFEETEVAQL----SRTLDRISMFDDS 62966 >emb|FN649756.1| Ectocarpus siliculosus strain Ec 32, whole genome shotgun sequence assembly, chromosome LG31 Length = 577967 Score = 28.9 bits (63), Expect = 5.5 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +2 Query: 61 WALYHNLEYDSGEEKNPRLIFYDDKDEVVQTVPVKK 96 WAL +E D + +P L K E + TVPVK+ Sbjct: 356285 WALSERVEIDCARDSDPDLRRPRQKHERIPTVPVKR 356392 >emb|FN649760.1| Ectocarpus siliculosus strain Ec 32, whole genome shotgun sequence assembly, unassigned sequences LGUn Length = 58155991 Score = 28.5 bits (62), Expect = 7.1 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +2 Query: 30 PVIAKGILKAPSVVGUAIKKMPALY 54 P++A G+L P+VVG ++ + ALY Sbjct: 35538146 PIVASGLLYEPTVVGTRLRVLYALY 35538220 >emb|FN649731.1| Ectocarpus siliculosus strain Ec 32, whole genome shotgun sequence assembly, chromosome LG06 Length = 3939081 Score = 28.1 bits (61), Expect = 9.3 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = -3 Query: 52 ALYMFLMERWALYHNLEYDSGEEKNPRLI 80 ALY+ L RW +L YD EEKN R+I Sbjct: 3086383 ALYVLLHVRWVWIIHLRYDV-EEKNTRMI 3086300 >emb|FN649736.1| Ectocarpus siliculosus strain Ec 32, whole genome shotgun sequence assembly, chromosome LG11 Length = 5521395 Score = 28.1 bits (61), Expect = 9.3 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Frame = +1 Query: 56 FLMERWALYH--NLEYDSGEEKNPRLIFYDDKDEVVQTVPVK 95 F++ +AL L++ GE L YDD DE+V T V+ Sbjct: 661498 FVLNSYALMEAVELQFPVGETYKFELTLYDDGDEIVSTFTVR 661623 >emb|FN649740.1| Ectocarpus siliculosus strain Ec 32, whole genome shotgun sequence assembly, chromosome LG15 Length = 5788546 Score = 28.1 bits (61), Expect = 9.3 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -3 Query: 48 KKMPALYMFLMERWALYHNLEYDSGEEKNPR 78 K++PAL++F + + H YD GEEK R Sbjct: 4715051 KRVPALFLFFVSAFD-EHRSSYDVGEEKRAR 4714962 Database: E.siliculosus/genome.fa Posted date: Feb 9, 2011 9:02 AM Number of letters in database: 195,934,119 Number of sequences in database: 35 Lambda K H 0.318 0.136 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,341,250 Number of Sequences: 35 Number of extensions: 260640 Number of successful extensions: 952 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 917 Number of HSP's gapped (non-prelim): 182 length of query: 137 length of database: 65,311,373 effective HSP length: 100 effective length of query: 37 effective length of database: 65,307,873 effective search space: 2416391301 effective search space used: 2416391301 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 61 (28.1 bits)