genewise output
Score 18.12 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SelJ_tetraodon_  164 PASWSSRTQR                                        
                     P+SW SRT++                                        
                     PSSWPSRTRK                                        
gi|288565200|gb19536 ctttcaaaaa                                        
                     cccgcggcga                                        
                     agtgacgagg                                        


//
>gi|288565200|gb|GG743997.1|:subseq(81295,35465).pep
PSSWPSRTRK
//
>gi|288565200|gb|GG743997.1|:subseq(81295,35465).[19536:19565].sp
CCATCGTCTTGGCCAAGCAGGACAAGGAAG
//
gi|288565200|gb|GG743997.1|:subseq(81295,35465)	GeneWise	match	19536	19565	18.12	+	.	gi|288565200|gb|GG743997.1|:subseq(81295,35465)-genewise-prediction-1
gi|288565200|gb|GG743997.1|:subseq(81295,35465)	GeneWise	cds	19536	19565	0.00	+	0	gi|288565200|gb|GG743997.1|:subseq(81295,35465)-genewise-prediction-1
//

genewise output
Score 55.84 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SelJ_tetraodon_    3 GVTKLAPVVAFYAGKPEMLGRVEDAVRVTQNNDACVAETLAAARFLEHF 
                     G+ K+  +VA YAGKPE+L  V  AV V Q     +   +A A +LE   
                     GLNKVPLLVARYAGKPELLDVVRQAVLVHQTTPLAIDVAIAGAIILEAV 
gi|288565200|g-20527 gcaagcccggctggacgccgggccggcgccaaccgagggagggaatggg 
                     gtaatctttcgacgacattattgactttaaccctctatctcgctttact 
                     cccgcgtctggtgcgggcctcgcacgcgcaggtcacccgccccccgggc 


SelJ_tetraodon_   52 ILNGPDPTALESVIRQLRDPNRKQAQDLDQAVVGHIHQVKENLSKTPQE 
                     ++     ++++  I   R   R +A    QA++  +    + ++ +    
                     VVK---QSSIKDAITAARSDARVEASV--QALIQGV--LDDAVASSDVH 
gi|288565200|g-20380 gga   cataaggaaggcaggcgggtg  cgcacgg  cgggggttggc 
                     tta   agctaactcccggacgtacct  acttagt  taactcccata 
                     ccg   gcgcgcgctgacctttggtgg  ggccata  tccggacgctc 


SelJ_tetraodon_  101 LIPAVFVNTXGLPGAFQAALHGVLTATNYVQAVRDTMSCGGCTCSRGSF 
                        A +  +  LPG+FQ+ L  +LT   YV +V   ++ GG  C R  F 
                     AAVAKYGKSCPLPGSFQSGLFVLLTDGQYVSSVTKNITAGGDNCGRSIF 
gi|288565200|g-20254 ggggatgattcccgttcagctgccaggctgttgaaaaaggggatgctat 
                     cctcaagacgctcgctaggtttttcagaatcctcaatccggaagggctt 
                     ggacgccggctcccgcaccccgccgccgtgggccgccgcccccctcgct 


SelJ_tetraodon_  150 IGACLGAQVGLEGIPASWSSRTQRY                         
                     +GA   A       P +W  +  R+                         
                     VGAVAAAATD-SPTPDAWQHKMTRF                         
gi|288565200|g-20107 ggggggggag tcacggtccaaact                         
                     tgctccccca ccccacgaaatcgt                         
                     cgcgcggcct ggggcgggcgggtt                         


//
>gi|288565200|gb|GG743997.1|:subseq(81295,35465).pep
GLNKVPLLVARYAGKPELLDVVRQAVLVHQTTPLAIDVAIAGAIILEAVVVKQSSIKDAI
TAARSDARVEASVQALIQGVLDDAVASSDVHAAVAKYGKSCPLPGSFQSGLFVLLTDGQY
VSSVTKNITAGGDNCGRSIFVGAVAAAATDSPTPDAWQHKMTRF
//
>gi|288565200|gb|GG743997.1|:subseq(81295,35465).[20527:20034].sp
GGCCTCAACAAGGTCCCGCTTCTCGTTGCGCGGTATGCGGGCAAGCCGGAGCTCCTCGAT
GTCGTGCGCCAAGCCGTGCTCGTGCACCAAACGACGCCTCTCGCAATCGACGTCGCGATC
GCCGGCGCCATCATCTTGGAGGCGGTCGTCGTCAAGCAGAGCTCGATCAAGGACGCGATC
ACTGCGGCACGCAGCGATGCTCGTGTGGAGGCTTCGGTGCAGGCGCTCATCCAAGGTGTA
CTTGACGACGCGGTGGCATCCTCGGACGTTCACGCGGCGGTAGCCAAGTACGGCAAGTCG
TGCCCTCTCCCCGGCTCGTTCCAAAGCGGCCTCTTCGTGCTCCTCACGGACGGCCAGTAT
GTGTCGTCGGTCACCAAGAACATCACGGCCGGCGGCGACAACTGCGGTCGCTCGATCTTT
GTCGGGGCCGTGGCCGCGGCGGCCACCGATTCGCCGACGCCGGACGCGTGGCAGCACAAG
ATGACGCGTTTT
//
gi|288565200|gb|GG743997.1|:subseq(81295,35465)	GeneWise	match	20527	20036	59.83	-	.	gi|288565200|gb|GG743997.1|:subseq(81295,35465)-genewise-prediction-1
gi|288565200|gb|GG743997.1|:subseq(81295,35465)	GeneWise	cds	20527	20036	0.00	-	0	gi|288565200|gb|GG743997.1|:subseq(81295,35465)-genewise-prediction-1
//