genewise output
Score 18.18 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SelJ_tetraodon_  144 CSRGSFIGACLGAQV                                   
                     C   SF+G  LG Q+                                   
                     CCYSSFVGGSLGTQI                                   
gi|299737255|gb 7454 ttttatgggatgaca                                   
                     ggacgttgggtgcat                                   
                     cctattttatattac                                   


//
>gi|299737255|gb|GL376634.1|:subseq(781589,50000).pep
CCYSSFVGGSLGTQI
//
>gi|299737255|gb|GL376634.1|:subseq(781589,50000).[7454:7498].sp
TGCTGCTATTCAAGTTTTGTTGGTGGAAGTTTAGGTACTCAAATC
//
gi|299737255|gb|GL376634.1|:subseq(781589,50000)	GeneWise	match	7454	7498	18.18	+	.	gi|299737255|gb|GL376634.1|:subseq(781589,50000)-genewise-prediction-1
gi|299737255|gb|GL376634.1|:subseq(781589,50000)	GeneWise	cds	7454	7498	0.00	+	0	gi|299737255|gb|GL376634.1|:subseq(781589,50000)-genewise-prediction-1
//

genewise output
Score 70.80 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SelJ_tetraodon_    1 MDGVTKLAPVVAFYAGKPEMLGRVEDAVRVTQNNDACVAETLAAARFLE 
                     +D +  +  VVA+YAG   +  +V++ V+V  +        L AA +LE 
                     IDVIALIPVVVALYAGTNSLFTKVDELVKVFYSGQRVRDAALVAAFILE 
gi|299737255|g-20530 aggagcacggggttggaatctaagggcgagtttgccgcgggcgggtacg 
                     tattcttctttctacgcacttcataattattacgagtgaccttccttta 
                     tcccgccccccggcctccgcccgccgccggtcgcgcgcccgcgcgcccg 


SelJ_tetraodon_   50 HFILNGPDPTALESVIRQLRDPNRKQAQDLDQAVVGHIHQVKENLSKTP 
                       IL      A+   IR  R    KQ + + +A            S+ P 
                     QVILGASVLQAMRMSIRTER-LTVKQRKMIFKAFT---------KSQLP 
gi|299737255|g-20383 cgacggtgccgacaaacagc cagaccaaatagta         atccc 
                     atttgccttactgtgtgcag tctaagatttactc         acatc 
                     ggcccgtgggcgcgcctggc gccggcggccggcc         gggag 


SelJ_tetraodon_   99 QELIPAVFVNTXGLPGAFQAALHGVLTATNYVQAVRDTMSCGGCTCSRG 
                            F N   LP  F A L  +   ++Y  AVR+ +  GG TC R  
                     SYEAIQKFGNKGSLPRGFFAVLQPLFVLSDYPTAVRENIIGGGRTCRRA 
gi|299737255|g-20266 atggacatgaagtcccgttggcccctgcagtcaggcgaaagggcatccg 
                     gaactaatgaagctcggttcttacttttgaaccctgaattggggcgggc 
                     ccggcggcccgatcgcccccgcggccaccccggcgcgcccccccgttcc 


SelJ_tetraodon_  148 SFIGACLGAQVGLEGIPASWSSRTQRYESVLEHAKKITSH          
                      FIGAC  AQ GL+ IP SW  +TQ Y+ +   A  + S+          
                     MFIGACFAAQDGLDAIPESWIKKTQYYDVIETDANTLISY          
gi|299737255|g-20119 ataggttggcggcggacgataaaacttggagaggaacaat          
                     tttgcgtccaagtactcaggtaacaaaattacacacttga          
                     gcccgctgcgcgccgccgcgcggcgcccccggcccgcccc          


//
>gi|299737255|gb|GL376634.1|:subseq(781589,50000).pep
IDVIALIPVVVALYAGTNSLFTKVDELVKVFYSGQRVRDAALVAAFILEQVILGASVLQA
MRMSIRTERLTVKQRKMIFKAFTKSQLPSYEAIQKFGNKGSLPRGFFAVLQPLFVLSDYP
TAVRENIIGGGRTCRRAMFIGACFAAQDGLDAIPESWIKKTQYYDVIETDANTLISY
//
>gi|299737255|gb|GL376634.1|:subseq(781589,50000).[20530:19998].sp
ATTGACGTCATCGCGCTCATCCCCGTCGTCGTCGCGTTGTACGCCGGTACCAACTCGCTC
TTCACCAAGGTCGACGAGCTCGTCAAGGTGTTTTACTCGGGCCAGCGCGTGCGCGACGCC
GCGCTCGTGGCCGCGTTCATCCTCGAGCAGGTGATCCTCGGCGCGTCTGTGCTGCAGGCC
ATGCGCATGAGCATCCGTACGGAGCGCCTGACCGTCAAGCAGCGCAAGATGATCTTCAAG
GCGTTCACCAAGTCGCAGCTACCGAGCTACGAGGCGATCCAGAAGTTCGGCAACAAGGGA
TCTCTCCCGCGCGGCTTCTTCGCCGTGCTCCAGCCGCTCTTCGTACTCAGCGACTACCCG
ACGGCCGTGCGCGAGAACATCATCGGCGGCGGCCGCACGTGTCGTCGCGCCATGTTCATC
GGCGCGTGCTTTGCGGCCCAGGACGGGCTCGACGCGATCCCCGAGAGCTGGATCAAGAAG
ACCCAGTACTACGACGTCATCGAGACGGACGCCAACACGCTCATCAGCTAC
//
gi|299737255|gb|GL376634.1|:subseq(781589,50000)	GeneWise	match	20530	20000	78.79	-	.	gi|299737255|gb|GL376634.1|:subseq(781589,50000)-genewise-prediction-1
gi|299737255|gb|GL376634.1|:subseq(781589,50000)	GeneWise	cds	20530	20000	0.00	-	0	gi|299737255|gb|GL376634.1|:subseq(781589,50000)-genewise-prediction-1
//