genewise output
Score 19.86 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SelJ_tetraodon_  141 GCTCSRGSFIGACLGAQVGLEGIPASWSSRTQRYES              
                     G T S G + G C    VG     A W++R +   S              
                     GPTQSSGPYTGPCRSVAVGSSRSTAQWTTRCRTIRS              
gi|199610515|gb11345 gcacatgctagctctggggtactagctaactcaact              
                     gccagcgcacgcggctctgcggcccagccgggctgc              
                     gggacccacgcatcgcattatcgcagggccctgctt              


//
>gi|199610515|gb|ABWE01001297.1|.pep
GPTQSSGPYTGPCRSVAVGSSRSTAQWTTRCRTIRS
//
>gi|199610515|gb|ABWE01001297.1|.[11345:11452].sp
GGGCCGACGCAAAGCTCCGGCCCATACACGGGCCCATGTCGCTCGGTCGCAGTTGGTTCA
AGTCGCTCGACCGCACAGTGGACGACCCGCTGCCGTACGATCCGTTCT
//
gi|199610515|gb|ABWE01001297.1|	GeneWise	match	11345	11452	19.86	+	.	gi|199610515|gb|ABWE01001297.1|-genewise-prediction-1
gi|199610515|gb|ABWE01001297.1|	GeneWise	cds	11345	11452	0.00	+	0	gi|199610515|gb|ABWE01001297.1|-genewise-prediction-1
//

genewise output
Score 69.06 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SelJ_tetraodon_   10 VVAFYAGKPEMLGRVEDAVRVTQNNDACVAETLAAARFLEHFILNGPDP 
                     VVA+YAG  ++  +V++ V+V           L AA  LE  IL      
                     VVALYAGTNQLFTKVDELVKVFYVGTRVRDAALVAAFVLEQVILGA--- 
gi|199610515|g-12491 gggctggaacttaagggcgagttggacgcgggcgggtgcgcgacgg    
                     ttctacgcaattcataattattatgcgtgaccttcctttaatttgc    
                     ccgtcgtccggccagcggcgctccttgcgtcttctgtgtgagttca    


SelJ_tetraodon_   59 TALESVIRQLRDPNRKQAQDLDQAVVGHIHQVKENLSKTPQELIPAVFV 
                         SV++ +R   R +   + Q  V      K  L   P       F  
                     ----SVLQAMRMSIRTERLSVKQRKVIFKAFTKSQL---PSYEAIQKFG 
gi|199610515|g-12353     tgccgacaaacagctagaccagatagtaatcc   catggacatg 
                         cttactgtgtgcagtgtaagatttactcacat   cgaactaatg 
                         gccgcgcgtccgacgtcggcagccgctcgggc   gtcagtggtc 


SelJ_tetraodon_  108 NTXGLPGAFQAALHGVLTATNYVQAVRDTMSCGGCTCSRGSFIGACLGA 
                     N   LPG F A L  +    +Y  AVR+ +  GG TC R  FIGAC  A 
                     NRGSLPGGFHAVLQPLFVLNDYPTAVRENIIGGGRTCRRAMFIGACFAA 
gi|199610515|g-12227 acgtccggtcggtccctgtagtcaggcgaaagggcatccgataggttgg 
                     aggctcggtacttacttttaaaccctgaattggggcgggctttgcgtcc 
                     ccgagcttccccgggctcgccccatccgcccaacgatctcgccggctct 


SelJ_tetraodon_  157 QVGLEGIPASWSSRTQRYESV                             
                     Q GL+ IP  W  +TQ ++ +                             
                     QDGLDVIPEGWIQKTQYFDFI                             
gi|199610515|g-12080 cggtggacggtacaacttgta                             
                     aagtattcaggtaacaatatt                             
                     gcggcccgacgcggggctccc                             


//
>gi|199610515|gb|ABWE01001297.1|.pep
VVALYAGTNQLFTKVDELVKVFYVGTRVRDAALVAAFVLEQVILGASVLQAMRMSIRTER
LSVKQRKVIFKAFTKSQLPSYEAIQKFGNRGSLPGGFHAVLQPLFVLNDYPTAVRENIIG
GGRTCRRAMFIGACFAAQDGLDVIPEGWIQKTQYFDFI
//
>gi|199610515|gb|ABWE01001297.1|.[12491:12016].sp
GTCGTCGCGCTTTACGCGGGTACCAACCAGTTGTTCACCAAAGTGGACGAGCTGGTCAAG
GTCTTTTACGTCGGTACTCGGGTCCGGGATGCCGCTCTTGTCGCTGCGTTTGTGCTTGAG
CAAGTGATTCTTGGCGCATCGGTCCTCCAGGCCATGCGCATGAGTATCCGCACGGAACGC
TTGAGTGTCAAGCAGCGCAAAGTGATCTTCAAGGCCTTTACCAAGTCGCAGCTCCCGAGT
TACGAAGCGATTCAGAAGTTTGGCAACCGCGGGTCACTGCCCGGTGGTTTCCACGCCGTC
TTGCAGCCGCTCTTTGTCTTGAACGACTACCCCACAGCTGTCCGCGAGAACATCATCGGA
GGAGGCCGGACATGTCGCCGTGCCATGTTCATCGGGGCGTGCTTTGCCGCTCAGGACGGG
TTGGACGTCATCCCGGAAGGCTGGATCCAGAAGACGCAGTACTTTGACTTCATC
//
gi|199610515|gb|ABWE01001297.1|	GeneWise	match	12491	12018	77.05	-	.	gi|199610515|gb|ABWE01001297.1|-genewise-prediction-1
gi|199610515|gb|ABWE01001297.1|	GeneWise	cds	12491	12018	0.00	-	0	gi|199610515|gb|ABWE01001297.1|-genewise-prediction-1
//