TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SelQ_toxoplasma_gondii_gladyshev # QUERY (66 letters) Database: T.trahens/genome.fa 131 sequences; 28,680,627 total letters Searching.................................................................done Score E Sequences producing significant alignments: (bits) Value gb|GL349488.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 27 1.6 gb|GL349460.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 27 1.6 gb|GL349463.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 27 2.0 gb|GL349454.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 27 2.0 gb|GL349443.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 27 2.0 gb|GL349441.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 27 2.0 gb|GL349435.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 27 2.0 gb|GL349494.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 26 3.5 gb|GL349475.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 26 3.5 gb|GL349448.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 26 3.5 gb|GL349438.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 26 3.5 gb|GL349478.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 26 4.6 gb|GL349466.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 26 4.6 gb|GL349452.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 26 4.6 gb|GL349444.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 26 4.6 gb|GL349506.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 25 6.0 gb|GL349493.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 25 6.0 gb|GL349453.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 25 6.0 gb|GL349446.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 25 6.0 gb|GL349439.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 25 6.0 gb|GL349479.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 25 7.8 gb|GL349470.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 25 7.8 gb|GL349469.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 25 7.8 gb|GL349468.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 25 7.8 gb|GL349451.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 25 7.8 gb|GL349434.1| Thecamonas trahens ATCC 50062 unplaced genomic sc... 25 7.8 >gb|GL349488.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.56, whole genome shotgun sequence Length = 238995 Score = 27.3 bits (59), Expect = 1.6 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = +1 Query: 26 PEHRRTWQFRGTIPQNPHLAPR 47 P H TW T+PQ P + PR Sbjct: 58465 PYHSSTWPSSRTLPQTPSIPPR 58530 >gb|GL349460.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.28, whole genome shotgun sequence Length = 422706 Score = 27.3 bits (59), Expect = 1.6 Identities = 15/43 (34%), Positives = 19/43 (44%) Frame = +3 Query: 24 IQPEHRRTWQFRGTIPQNPHLAPRFRPNVNDRYQIRRGRGGXC 66 +QP FR Q HLA RP ++ R+ R G G C Sbjct: 383118 LQPRAPALCLFRAAAAQEEHLARSRRPALHPRWLHRVGPDGDC 383246 Score = 25.4 bits (54), Expect = 6.0 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +3 Query: 42 PHLAPRFRPNVNDRYQIRRGRGGXC 66 P RFRP + + RGRGG C Sbjct: 85224 PR*VSRFRPLAHAHLRALRGRGGSC 85298 >gb|GL349463.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.31, whole genome shotgun sequence Length = 395032 Score = 26.9 bits (58), Expect = 2.0 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%) Frame = -2 Query: 30 RTWQFRGTIPQNPHLAPRF-RPNVNDRYQIRRGR 62 R+W FRG P P +F RP R R GR Sbjct: 161892 RSWFFRGFAPAQPMTGSQFIRPRSCQRISTRHGR 161791 >gb|GL349454.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.22, whole genome shotgun sequence Length = 456871 Score = 26.9 bits (58), Expect = 2.0 Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 5/48 (10%) Frame = -2 Query: 24 IQPEHRRTWQFRGTIPQNPHLAP-----RFRPNVNDRYQIRRGRGGXC 66 ++P RR W Q PH P R R + R + RGG C Sbjct: 45000 LRPRRRRGWASNPRRRQQPHARPSQEPRRARASARPRPRYHECRGGRC 44857 >gb|GL349443.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.11, whole genome shotgun sequence Length = 571036 Score = 26.9 bits (58), Expect = 2.0 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%) Frame = -2 Query: 28 HRRTWQ---FRGTIPQNPHLAPRFRPNVNDRYQIRR 60 HRR Q F+G +P LAPR NV++R ++R+ Sbjct: 178449 HRRRRQKRSFKGLDR*SPRLAPRLAWNVDNRERVRK 178342 >gb|GL349441.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.9, whole genome shotgun sequence Length = 584593 Score = 26.9 bits (58), Expect = 2.0 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = -1 Query: 20 RERGIQPEHRRTWQFRGTIPQNPHLAPRF-RPNVNDRYQIR--RGRGGXC 66 R R + P H WQ R +P +PH A R R D R +GR G C Sbjct: 91507 RRRHLPPPHH--WQARQAVPLSPHRARRV*RSQERD*RSRRHPQGRRGQC 91364 Score = 25.4 bits (54), Expect = 6.0 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = -2 Query: 17 AADRERGIQPEHRRTWQFRGTIPQNPHLAPRFRPNVNDRYQIRRGRGG 64 A DR R + R+ + G ++ + R R +R+ IRR RGG Sbjct: 301074 APDRRRSVGRSVGRSVESVGRSVESISASERSRAREPNRFAIRRSRGG 300931 >gb|GL349435.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.3, whole genome shotgun sequence Length = 673526 Score = 26.9 bits (58), Expect = 2.0 Identities = 15/42 (35%), Positives = 16/42 (38%) Frame = +2 Query: 25 QPEHRRTWQFRGTIPQNPHLAPRFRPNVNDRYQIRRGRGGXC 66 +P HRR G PHL R P RR GG C Sbjct: 34913 RPGHRRPAHGLGRRLARPHLHHRHLPGPRHSLAARRSLGGIC 35038 Score = 26.2 bits (56), Expect = 3.5 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = -2 Query: 26 PEHRRTWQFRGTIPQNPHLAPRFRPNVNDR 55 PEH W+ PQ+P + PR R + + R Sbjct: 527737 PEHAARWRTSA*HPQDPRICPRRRRHPHAR 527648 Score = 25.4 bits (54), Expect = 6.0 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = -1 Query: 20 RERGIQPEHRRTWQFRGTI 38 R+R ++ RRTWQ RG + Sbjct: 378467 RQRSLRLRRRRTWQSRGVL 378411 >gb|GL349494.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.62, whole genome shotgun sequence Length = 213085 Score = 26.2 bits (56), Expect = 3.5 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = -2 Query: 22 RGIQPEHRRTWQFRGTIPQNPHLAPRFRPNVNDRYQIRRGRGG 64 R + P+HRR + P L R P V R RRGRGG Sbjct: 62238 RPLCPDHRRMRPATSSAPVPSTL--RGWPTVGSRQGTRRGRGG 62116 >gb|GL349475.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.43, whole genome shotgun sequence Length = 324729 Score = 26.2 bits (56), Expect = 3.5 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +3 Query: 28 HRRTWQFRGTIPQNPHLAPRFRPNVNDRYQIRRGR 62 HR TW++RG+ P+ + R RP R RR R Sbjct: 147576 HRLTWRWRGSCPKCGWRSMRGRPG*ASRGNRRRLR 147680 >gb|GL349448.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.16, whole genome shotgun sequence Length = 538444 Score = 26.2 bits (56), Expect = 3.5 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = +1 Query: 20 RERGIQPEHRRTWQFRGTIPQNPHLAPRFRPNVNDRYQIRRGR 62 R RGI+P+ Q +G + NP A R V DR R R Sbjct: 150691 RGRGIRPDVHHRPQKQGIVKHNPRTAALARAIVLDRRPARACR 150819 >gb|GL349438.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.6, whole genome shotgun sequence Length = 631277 Score = 26.2 bits (56), Expect = 3.5 Identities = 21/50 (42%), Positives = 22/50 (44%), Gaps = 3/50 (6%) Frame = +2 Query: 17 AADRERGIQPEHRRTWQFRGTIPQNPHL-APRFRP--NVNDRYQIRRGRG 63 A+ R R P RRTWQ P L A R RP R RRGRG Sbjct: 572525 ASARCRRAMPTSRRTWQDAAPRQTLPALSATRARPLQQPQQRSPSRRGRG 572674 >gb|GL349478.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.46, whole genome shotgun sequence Length = 304656 Score = 25.8 bits (55), Expect = 4.6 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +3 Query: 20 RERGIQPEHRRTWQFRGTIPQNPHLAPRFRPNVNDR 55 R++ Q +HRR + R PQ PH RP + DR Sbjct: 182337 RDQPDQLDHRRPPRPRRRRPQRPHRQGPHRPALPDR 182444 Score = 25.0 bits (53), Expect = 7.8 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = +3 Query: 17 AADR-ERGIQPEHRRTWQFRGTIPQNPHLAPRFRPNVNDRYQIRRGR 62 A DR + G+QP R + NPH RP+ NDR + R G+ Sbjct: 199071 AKDRVDVGLQP---RNHSVDALVRHNPHRDLGRRPSRNDRRRARTGK 199202 >gb|GL349466.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.34, whole genome shotgun sequence Length = 390530 Score = 25.8 bits (55), Expect = 4.6 Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 9/49 (18%) Frame = -1 Query: 23 GIQPEHRRTWQFRGTIPQNPH------LAPRFR---PNVNDRYQIRRGR 62 G P R W RG PQ PH LA R R P+ R RGR Sbjct: 217925 GESPRSARPWSGRGGGPQQPHSGAEAPLAARARAQAPSPIQRRSTGRGR 217779 Score = 25.4 bits (54), Expect = 6.0 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = -2 Query: 26 PEHRRTWQFRGTIPQNPHLAPRFRPN 51 P HRR W RG +A R RP+ Sbjct: 245287 PGHRRVWLLRGASSDRLGIAGRRRPS 245210 >gb|GL349452.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.20, whole genome shotgun sequence Length = 525314 Score = 25.8 bits (55), Expect = 4.6 Identities = 12/31 (38%), Positives = 13/31 (41%) Frame = +2 Query: 20 RERGIQPEHRRTWQFRGTIPQNPHLAPRFRP 50 R R P HRR W I P P+ RP Sbjct: 94922 RRRLAPPRHRRLWPPHRRISARPRPPPKTRP 95014 Score = 25.0 bits (53), Expect = 7.8 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = +1 Query: 46 PRFRPNVNDRYQIRRGRGG 64 PRFR V R Q RRGR G Sbjct: 445942 PRFRRTVR*RTQCRRGRWG 445998 >gb|GL349444.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.12, whole genome shotgun sequence Length = 562821 Score = 25.8 bits (55), Expect = 4.6 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -2 Query: 21 ERGIQPEHRRTWQFRGTIPQNPHLAPR 47 +RG +P HR + RG P P APR Sbjct: 37124 QRGTRPSHR**CRRRGRAPVAPRTAPR 37044 >gb|GL349506.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.74, whole genome shotgun sequence Length = 96654 Score = 25.4 bits (54), Expect = 6.0 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = -2 Query: 17 AADRERGIQPEHRRTWQFRGTIPQNPHLAPRFRPNVNDRYQIRR 60 A DR+R + P HRR P +P R + R Q RR Sbjct: 71693 ARDRDRALCPPHRRHLHLARHCPHHPRRLCRQGRHWRGRLQRRR 71562 >gb|GL349493.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.61, whole genome shotgun sequence Length = 239416 Score = 25.4 bits (54), Expect = 6.0 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +1 Query: 20 RERGIQPEHRRTWQFRGTIPQNPHLAPRFRPN 51 R R Q H R + RG P +PH PR+R N Sbjct: 140023 RRRPTQSPHSRP-RPRGWRPPSPHTRPRWRMN 140115 Score = 25.4 bits (54), Expect = 6.0 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +1 Query: 20 RERGIQPEHRRTWQFRGTIPQNPHLAPRFRPN 51 R R Q H R + RG P +PH PR+R N Sbjct: 140299 RRRPTQSPHSRP-RPRGWRPPSPHTRPRWRMN 140391 >gb|GL349453.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.21, whole genome shotgun sequence Length = 472482 Score = 25.4 bits (54), Expect = 6.0 Identities = 14/50 (28%), Positives = 21/50 (42%) Frame = +3 Query: 17 AADRERGIQPEHRRTWQFRGTIPQNPHLAPRFRPNVNDRYQIRRGRGGXC 66 A R++G + R W+ +PQ+ L + D RGRG C Sbjct: 409053 AVGRDQGARAAAARLWRRACGLPQHGRLPQDVQAEGGDAVPGVRGRGAVC 409202 >gb|GL349446.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.14, whole genome shotgun sequence Length = 557936 Score = 25.4 bits (54), Expect = 6.0 Identities = 15/44 (34%), Positives = 18/44 (40%) Frame = +1 Query: 18 ADRERGIQPEHRRTWQFRGTIPQNPHLAPRFRPNVNDRYQIRRG 61 A R QP H RG IP HLA + NV+ + G Sbjct: 138211 AHPRRAGQPGHLVVEDERGAIPHTRHLAEKRENNVHKARAAKHG 138342 >gb|GL349439.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.7, whole genome shotgun sequence Length = 618594 Score = 25.4 bits (54), Expect = 6.0 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = -1 Query: 21 ERGIQPEHRRTWQFRGTIPQNPHLAPRFRPNVNDRYQIRR 60 +R +P H R W RG + P A R +DR + RR Sbjct: 465756 QRQRRPHHSRAWLSRGASRRAPAAAARPASARDDRCKHRR 465637 >gb|GL349479.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.47, whole genome shotgun sequence Length = 307816 Score = 25.0 bits (53), Expect = 7.8 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -1 Query: 20 RERGIQPEHRRTWQFRGTIPQNPHLAPR 47 RERGI +H R+ +G I Q + P+ Sbjct: 135424 RERGIDLDHNRSMVLQGEIEQIAMMKPK 135341 >gb|GL349470.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.38, whole genome shotgun sequence Length = 356648 Score = 25.0 bits (53), Expect = 7.8 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = -1 Query: 17 AADRERGIQPEHRRTWQFRGTIPQNPHLAPRFRPNVNDRYQIR 59 A D ERG R + Q+PH + +FRP V+ + +R Sbjct: 182075 ADDVERGAHRVRR--------VEQSPHSSAQFRPQVSRNHVVR 181971 >gb|GL349469.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.37, whole genome shotgun sequence Length = 357088 Score = 25.0 bits (53), Expect = 7.8 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -3 Query: 23 GIQPEHRRTWQFRGTIPQNPHLAPRFRP 50 G+ PE+ T +RG + Q P LA RP Sbjct: 289928 GVDPEYAITPPYRGPLWQLPGLASASRP 289845 >gb|GL349468.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.36, whole genome shotgun sequence Length = 367059 Score = 25.0 bits (53), Expect = 7.8 Identities = 14/41 (34%), Positives = 17/41 (41%) Frame = +1 Query: 26 PEHRRTWQFRGTIPQNPHLAPRFRPNVNDRYQIRRGRGGXC 66 P H R+ Q RG P H + RP R + GG C Sbjct: 113257 PRHERSAQGRGRAPPEAHSSLAKRPPAVLRTRRHARGGGEC 113379 >gb|GL349451.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.19, whole genome shotgun sequence Length = 517691 Score = 25.0 bits (53), Expect = 7.8 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = -1 Query: 26 PEHRRTWQFRGTIPQNPHLAPRFRPNVNDRYQIRRGRG 63 P H R WQ G P +P R R R ++ G+G Sbjct: 441119 PRHHRHWQIGGHWPSSPRWPYRRR-----RVWVKTGKG 441021 >gb|GL349434.1| Thecamonas trahens ATCC 50062 unplaced genomic scaffold supercont1.2, whole genome shotgun sequence Length = 680870 Score = 25.0 bits (53), Expect = 7.8 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = -2 Query: 42 PHLAPRFRPNVNDRYQIRRGR 62 PH APR RP + R RGR Sbjct: 650905 PHCAPRRRPRLTPRLGPARGR 650843 Database: T.trahens/genome.fa Posted date: Feb 9, 2011 9:02 AM Number of letters in database: 28,680,627 Number of sequences in database: 131 Lambda K H 0.326 0.143 0.484 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,138,791 Number of Sequences: 131 Number of extensions: 54763 Number of successful extensions: 742 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 39 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 601 Number of HSP's gapped (non-prelim): 325 length of query: 66 length of database: 9,560,209 effective HSP length: 41 effective length of query: 25 effective length of database: 9,554,838 effective search space: 238870950 effective search space used: 238870950 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 52 (24.6 bits)