TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SelQ_toxoplasma_gondii_gladyshev # QUERY (66 letters) Database: S.parasitica/genome.fa 1445 sequences; 53,132,636 total letters Searching...................................................done Score E Sequences producing significant alignments: (bits) Value gb|GG743928.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 30 0.34 gb|GG744534.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 28 1.7 gb|GG743895.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 28 2.2 gb|GG743884.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 28 2.2 gb|GG743905.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 27 2.9 gb|GG743889.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 27 2.9 gb|GG743937.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 27 3.8 gb|GG743934.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 27 3.8 gb|GG743917.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 27 4.9 gb|GG743916.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 27 4.9 gb|GG743892.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 26 6.5 gb|GG743964.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 26 8.4 gb|GG743929.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 26 8.4 gb|GG743914.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 26 8.4 >gb|GG743928.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.46, whole genome shotgun sequence Length = 277252 Score = 30.4 bits (67), Expect = 0.34 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -2 Query: 17 AADRERGIQPEHRRTWQFR 35 A DR RG+Q +H+R WQ R Sbjct: 74880 ACDRSRGLQRQHQRRWQLR 74824 >gb|GG744534.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.652, whole genome shotgun sequence Length = 4169 Score = 28.1 bits (61), Expect = 1.7 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 3/37 (8%) Frame = -1 Query: 29 RRTWQFRGTIPQNPHLAP---RFRPNVNDRYQIRRGR 62 RRTW G PH AP R R + R + RRGR Sbjct: 3218 RRTWSLAGAA*ALPHRAPRRARARSSWRQRTRTRRGR 3108 >gb|GG743895.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.13, whole genome shotgun sequence Length = 731627 Score = 27.7 bits (60), Expect = 2.2 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -2 Query: 26 PEHRRTWQFRGTIPQNPHLAPRFRPN 51 P HR+ Q R +PQ PHL RP+ Sbjct: 682570 PVHRKKSQRRPALPQRPHLHVHRRPS 682493 >gb|GG743884.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.2, whole genome shotgun sequence Length = 1567649 Score = 27.7 bits (60), Expect = 2.2 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -1 Query: 25 QPEHRRTWQFRGTIPQNPHLAPRFRPNVNDRYQIRRGR 62 +P R+ W NPHL FRP +RY++R+ R Sbjct: 522830 RPLLRKYWPQTPLNDTNPHLV--FRPREKERYKLRKHR 522723 Score = 26.6 bits (57), Expect = 4.9 Identities = 11/28 (39%), Positives = 13/28 (46%) Frame = -2 Query: 27 EHRRTWQFRGTIPQNPHLAPRFRPNVND 54 + RR G PQ+ H APR ND Sbjct: 200857 QRRRVRSLHGAAPQHSHTAPRQEQRAND 200774 >gb|GG743905.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.23, whole genome shotgun sequence Length = 458240 Score = 27.3 bits (59), Expect = 2.9 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = -2 Query: 20 RERGIQPEHRRTWQFRGTIPQNPHLAPRFRP 50 RER +P H R W R + A RFRP Sbjct: 15052 RERPRRPGHHRVWHRRRAVRPRRPRARRFRP 14960 >gb|GG743889.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.7, whole genome shotgun sequence Length = 943373 Score = 27.3 bits (59), Expect = 2.9 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -2 Query: 22 RGIQPEHRRTWQFRGTIPQNPHLAP 46 RG +PE RR R +P N HL P Sbjct: 125266 RGDRPETRRRQNRRAIVPGNEHLVP 125192 >gb|GG743937.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.55, whole genome shotgun sequence Length = 220287 Score = 26.9 bits (58), Expect = 3.8 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -3 Query: 28 HRRTWQFRGTIPQNPHLAPRFRPNVNDR 55 HRR W+ RG +PQ A R P+ R Sbjct: 173242 HRRVWRRRGRLPQGALAALRHVPHGGQR 173159 >gb|GG743934.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.52, whole genome shotgun sequence Length = 228074 Score = 26.9 bits (58), Expect = 3.8 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Frame = -1 Query: 17 AADRERGIQPEHRRTW---QFRGTIPQNPHLAPRFRPNVNDRYQIRRGR 62 A R RG Q + W QF + PH P RP+++ R RR R Sbjct: 174200 ATTRPRGSQKQPIFPWP*TQFSSRQHRRPHRRPHRRPHLHRRQHRRRRR 174054 >gb|GG743917.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.35, whole genome shotgun sequence Length = 346584 Score = 26.6 bits (57), Expect = 4.9 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = +3 Query: 36 GTIPQNPHLAPRFRPNVNDRYQIRRGRGGXC 66 G P PH APR P V ++ R R G C Sbjct: 291987 GHAPGRPHGAPRVEPVVVHPRRLPRARQGRC 292079 >gb|GG743916.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.34, whole genome shotgun sequence Length = 347721 Score = 26.6 bits (57), Expect = 4.9 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 20/61 (32%) Frame = -3 Query: 24 IQPEHRRTWQFRGTIPQNPHL-------------APRFRPNVND-------RYQIRRGRG 63 +Q RR+W+ PQ PHL APRF +V +Y++R GR Sbjct: 290926 VQWPTRRSWRRHRRWPQTPHLVFL*QSQFRPLNIAPRFVASVPSCVAPTIVKYEMRAGRD 290747 Query: 64 G 64 G Sbjct: 290746 G 290744 Score = 25.8 bits (55), Expect = 8.4 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +2 Query: 22 RGIQPEHRRTWQFRGTIPQNPHLAPRFR 49 RG+Q RR G+ +PHL PRFR Sbjct: 206189 RGLQRSKRR-----GSKTSHPHLGPRFR 206257 >gb|GG743892.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.10, whole genome shotgun sequence Length = 790954 Score = 26.2 bits (56), Expect = 6.5 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = -1 Query: 34 FRGTIPQNPHLAPRFRPNVN 53 F T P+NP PRFRP+ N Sbjct: 341719 FPVTWPENPRKPPRFRPSRN 341660 >gb|GG743964.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.82, whole genome shotgun sequence Length = 147639 Score = 25.8 bits (55), Expect = 8.4 Identities = 12/27 (44%), Positives = 13/27 (48%) Frame = +3 Query: 21 ERGIQPEHRRTWQFRGTIPQNPHLAPR 47 E G+Q RR WQ R P L PR Sbjct: 131121 EPGLQDLDRRQWQRRSRRAHGPQLQPR 131201 >gb|GG743929.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.47, whole genome shotgun sequence Length = 289941 Score = 25.8 bits (55), Expect = 8.4 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -2 Query: 20 RERGIQPEHRRTWQFRGTIPQ 40 R G+Q RR+WQ +G IP+ Sbjct: 160229 RASGVQ*NTRRSWQAKGCIPR 160167 >gb|GG743914.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.32, whole genome shotgun sequence Length = 360474 Score = 25.8 bits (55), Expect = 8.4 Identities = 14/39 (35%), Positives = 16/39 (41%) Frame = -2 Query: 19 DRERGIQPEHRRTWQFRGTIPQNPHLAPRFRPNVNDRYQ 57 D G+QP HR Q PQ H PR + R Q Sbjct: 304199 DGPHGLQPPHRPLEQRAHVPPQQGHSLPRHDRRCHGRVQ 304083 Database: S.parasitica/genome.fa Posted date: Feb 9, 2011 9:02 AM Number of letters in database: 53,132,636 Number of sequences in database: 1445 Lambda K H 0.326 0.143 0.484 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,807,698 Number of Sequences: 1445 Number of extensions: 71345 Number of successful extensions: 862 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 207 Number of HSP's successfully gapped in prelim test: 40 Number of HSP's that attempted gapping in prelim test: 440 Number of HSP's gapped (non-prelim): 607 length of query: 66 length of database: 17,710,878 effective HSP length: 41 effective length of query: 25 effective length of database: 17,651,633 effective search space: 441290825 effective search space used: 441290825 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 54 (25.4 bits)