TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SelQ_toxoplasma_gondii_gladyshev # QUERY
         (66 letters)

Database: A.taiwanensis/genome.fa 
           5379 sequences; 6,149,411 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJQ01005293.1| Ascogregarina taiwanensis CLXbaP68-C01.b1.ab1...    26   0.99 
gb|ABJQ01003780.1| Ascogregarina taiwanensis CLRanP121-B02.b1.ab...    25   1.3  
gb|ABJQ01001598.1| Ascogregarina taiwanensis Contig1831, whole g...    25   1.3  
gb|ABJQ01002191.1| Ascogregarina taiwanensis Contig2478, whole g...    23   4.9  
gb|ABJQ01002091.1| Ascogregarina taiwanensis Contig2367, whole g...    23   4.9  
gb|ABJQ01005364.1| Ascogregarina taiwanensis CLRanP95-F02.b1.ab1...    23   8.4  

>gb|ABJQ01005293.1| Ascogregarina taiwanensis CLXbaP68-C01.b1.ab1, whole genome shotgun
           sequence
          Length = 780

 Score = 25.8 bits (55), Expect = 0.99
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 19  DRERGIQPEHRRTWQFRGTIPQNPHLAPR 47
           DR RG++  HRR    RG +P  P  A R
Sbjct: 203 DRRRGLRARHRRR---RGPVPGEPAEAAR 126


>gb|ABJQ01003780.1| Ascogregarina taiwanensis CLRanP121-B02.b1.ab1, whole genome
           shotgun sequence
          Length = 780

 Score = 25.4 bits (54), Expect = 1.3
 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -2

Query: 22  RGIQPE-HRRTWQFRGTIPQNPHLAPRFRPNVNDRYQIRRGRGG 64
           R ++P+ HRR  +  G     PH APR  P++  R Q RR RGG
Sbjct: 188 RALRPQPHRRHARMGG----RPHAAPR--PHLRARQQ-RRHRGG 78


>gb|ABJQ01001598.1| Ascogregarina taiwanensis Contig1831, whole genome shotgun sequence
          Length = 844

 Score = 25.4 bits (54), Expect = 1.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 21  ERGIQPEHRRTWQFRGTIPQ 40
           +  +QP  R  WQF GT P+
Sbjct: 219 QEALQPGPRHRWQFLGTTPK 160


>gb|ABJQ01002191.1| Ascogregarina taiwanensis Contig2478, whole genome shotgun
          sequence
          Length = 1015

 Score = 23.5 bits (49), Expect = 4.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -2

Query: 20 RERGIQPEHRRTWQFRGTIPQNPHLAPRFR 49
          R R  +  H+R  Q     PQ PH  PR R
Sbjct: 90 RHRRHRSAHQRLHQLLRPPPQRPHRHPRRR 1


>gb|ABJQ01002091.1| Ascogregarina taiwanensis Contig2367, whole genome shotgun sequence
          Length = 1839

 Score = 23.5 bits (49), Expect = 4.9
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 26  PEHRRTWQFRGTIPQNPHLAPRFRPNVN 53
           P  R +WQ +    QNP L+ R  P+ +
Sbjct: 288 PPERDSWQEKFRAIQNPSLSSRLFPSAS 205


>gb|ABJQ01005364.1| Ascogregarina taiwanensis CLRanP95-F02.b1.ab1, whole genome shotgun
           sequence
          Length = 831

 Score = 22.7 bits (47), Expect = 8.4
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = -3

Query: 20  RERGIQPEHRRTWQFRGTIPQNPHL-APRFRP 50
           R+R   P   +TWQ +    Q PH+  PR  P
Sbjct: 217 RQRSSMPP--KTWQLKQQFSQPPHIEGPRTLP 128


  Database: A.taiwanensis/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 6,149,411
  Number of sequences in database:  5379
  
Lambda     K      H
   0.326    0.143    0.484 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 459,426
Number of Sequences: 5379
Number of extensions: 5621
Number of successful extensions: 42
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of query: 66
length of database: 2,049,803
effective HSP length: 38
effective length of query: 28
effective length of database: 1,845,401
effective search space: 51671228
effective search space used: 51671228
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 46 (22.3 bits)