TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000009_1.0 # Protein # Glutathione peroxidase 6 (GPx6) # Homo sapiens # Complete (221 letters) Database: S.parasitica/genome.fa 1445 sequences; 53,132,636 total letters Searching...................................................done Score E Sequences producing significant alignments: (bits) Value gb|GG743886.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 99 3e-21 gb|GG743915.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 91 1e-18 gb|GG744085.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 54 1e-07 gb|GG743914.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 28 8.2 >gb|GG743886.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.4, whole genome shotgun sequence Length = 1210272 Score = 99.4 bits (246), Expect = 3e-21 Identities = 62/165 (37%), Positives = 89/165 (53%), Gaps = 1/165 (0%) Frame = -2 Query: 54 IQFKQFAGKHVLFVNVAAYUGLAA-QYPELNALQEELKNFGVIVLAFPCNQFGKQEPGTN 112 + + + G+ L VNVA+ GL Y +L L + ++ G+ +LA+PCNQFG QEPGTN Sbjct: 1162352 VPMETYRGRVCLVVNVASA*GLTKLNYTQLVELDNKYRDRGLQILAYPCNQFGGQEPGTN 1162173 Query: 113 SEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTSDLLGSSSQLFWE 172 EI+ + +GF +F FEK DVNG+ Q V+ +LK+ T LGS+ Sbjct: 1162172 EEIMAFV------AGFNATFPFFEKADVNGDNTQPVYAYLKSKLTGT---LGSA------ 1162038 Query: 173 PMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQ 217 I+WNF KFLV +G P + Q ++DIL+ L Q Sbjct: 1162037 ------IKWNFTKFLVDRNGQPFKRYSPQTAPMDFEADILQLLDQ 1161921 Score = 99.0 bits (245), Expect = 4e-21 Identities = 63/174 (36%), Positives = 91/174 (52%), Gaps = 1/174 (0%) Frame = -2 Query: 39 TIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLA-AQYPELNALQEELKNFGVIVL 97 + ++ G+ ++G+ + F G+ L VNVA+ GL Y +L L ++L+ G+ +L Sbjct: 1158839 SFFDLGSNNMDGQR-VPMATFRGRVCLVVNVASA*GLTKVNYTQLVQLDDKLRERGLQIL 1158663 Query: 98 AFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCP 157 A+PCNQFG QEPGTN+EI+ + + F F LFEK DVNGE Q+V+ FLK+ P Sbjct: 1158662 AYPCNQFGGQEPGTNAEIMAFV------AKFGVRFPLFEKADVNGEHTQEVYAFLKDRLP 1158501 Query: 158 PTSDLLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDI 211 DI WNF KFLV G PV + +++DI Sbjct: 1158500 -------------------GDITWNFAKFLVDRHGQPVKRYDPNVAPFDLEADI 1158396 Score = 86.3 bits (212), Expect = 3e-17 Identities = 62/181 (34%), Positives = 87/181 (48%), Gaps = 2/181 (1%) Frame = -3 Query: 39 TIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLAAQ--YPELNALQEELKNFGVIV 96 + YE + +G E I +F + L VNVA AQ Y +L L ++ G+ + Sbjct: 1159939 SFYELSSKNTDGVE-ISMAKFTSRVCLVVNVAGAS*SQAQLNYTQLVELDRRYRDRGLQI 1159763 Query: 97 LAFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSC 156 L +PCNQF QEPGTN EIL + F +F + EK DVNG K Q VF +LK Sbjct: 1159762 LLYPCNQFANQEPGTNDEILAFAR------SFGVTFPVMEKADVNGSKTQPVFKYLK--- 1159610 Query: 157 PPTSDLLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLK 216 S L G+ + I+WN+ KFL+ +G P + P + DIL+ L Sbjct: 1159609 ---SKLRGTFTS---------TIKWNYTKFLIDRNGQPYKRFGTFTPPIKLIDDILDLLD 1159466 Query: 217 Q 217 + Sbjct: 1159465 E 1159463 >gb|GG743915.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.33, whole genome shotgun sequence Length = 345601 Score = 90.5 bits (223), Expect = 1e-18 Identities = 64/165 (38%), Positives = 79/165 (47%), Gaps = 1/165 (0%) Frame = +1 Query: 54 IQFKQFAGKHVLFVNVAAYUGLAA-QYPELNALQEELKNFGVIVLAFPCNQFGKQEPGTN 112 + FAG L VNVA+ GLA Y L L + G+ +LAFPCNQF QEPG+ Sbjct: 140398 VSMAAFAGSVCLVVNVASQ*GLATLNYTHLAELDRRFRPLGLRILAFPCNQFAGQEPGSE 140577 Query: 113 SEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTSDLLGSSSQLFWE 172 EI +GF +F +F KGDVNG K Q VF LK T LG+S Sbjct: 140578 REIREF------ANGFGATFPIFAKGDVNGAKTQPVFRSLKAHLTGT---LGAS------ 140712 Query: 173 PMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQ 217 I+WNF KFLV +G P + P + DIL L + Sbjct: 140713 ------IKWNFTKFLVRRNGQPFKRYSPTTPPLRLLDDILMLLAE 140829 >gb|GG744085.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.203, whole genome shotgun sequence Length = 29623 Score = 54.3 bits (129), Expect = 1e-07 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 13/145 (8%) Frame = +1 Query: 84 ALQEELKNFGVIVLAFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEK------ 137 AL + + G+ +L FPCNQFG QEPG+ +IL + + +F +F+K Sbjct: 21883 ALYTKYHDQGLEILGFPCNQFGAQEPGSMRDILALTHH------YDVTFPIFQKVRSMAW 22044 Query: 138 -------GDVNGEKEQKVFTFLKNSCPPTSDLLGSSSQLFWEPMKVHDIRWNFEKFLVGP 190 DVNG VF +L TS L GS + +D++WNF KFL+ Sbjct: 22045 AQLGMD*VDVNGHDADPVFAYL------TSVLAGSIT---------NDVKWNFSKFLLA- 22176 Query: 191 DGVPVMHWFHQAPVSTVKSDILEYL 215 G P + ++++ I+ L Sbjct: 22177 HGQPYARYAPTTSPASIEDAIVRIL 22251 >gb|GG743914.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.32, whole genome shotgun sequence Length = 360474 Score = 28.1 bits (61), Expect = 8.2 Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = -1 Query: 164 GSSSQLFWEPMKVHDIRW-NFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQFNTH 221 GS +FW+P+K ++ + E + +GV ++ F + V +D+ E + N H Sbjct: 251007 GSRPSIFWKPLKCANLAYKQVECAIQSTEGVQIVVEFGRLVAVVVNADLRERREVHNRH 250831 Database: S.parasitica/genome.fa Posted date: Feb 9, 2011 9:02 AM Number of letters in database: 53,132,636 Number of sequences in database: 1445 Lambda K H 0.322 0.139 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,057,710 Number of Sequences: 1445 Number of extensions: 175661 Number of successful extensions: 661 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 50 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 545 Number of HSP's gapped (non-prelim): 206 length of query: 221 length of database: 17,710,878 effective HSP length: 100 effective length of query: 121 effective length of database: 17,566,378 effective search space: 2125531738 effective search space used: 2125531738 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 60 (27.7 bits)