TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000009_1.0 # Protein # Glutathione peroxidase 6 (GPx6) #
Homo sapiens # Complete
         (221 letters)

Database: A.taiwanensis/genome.fa 
           5379 sequences; 6,149,411 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJQ01002697.1| Ascogregarina taiwanensis Contig3010, whole g...    29   0.50 
gb|ABJQ01002709.1| Ascogregarina taiwanensis Contig3023, whole g...    25   5.5  
gb|ABJQ01003169.1| Ascogregarina taiwanensis Contig3503, whole g...    25   7.2  
gb|ABJQ01004502.1| Ascogregarina taiwanensis CLRanP155-G09.b1.ab...    25   9.4  

>gb|ABJQ01002697.1| Ascogregarina taiwanensis Contig3010, whole genome shotgun sequence
          Length = 1665

 Score = 28.9 bits (63), Expect = 0.50
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +3

Query: 126 SGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTSDLLGSSSQLFWEPMK 175
           S FVP+           E+  KV+  LKN    T  L GS++Q  W P++
Sbjct: 681 SSFVPT---------TNEQNLKVWDILKNELKVTCSLRGSAAQEKWPPLQ 803


>gb|ABJQ01002709.1| Ascogregarina taiwanensis Contig3023, whole genome shotgun sequence
          Length = 1841

 Score = 25.4 bits (54), Expect = 5.5
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 152  LKNSCPPTSDLLGSSSQLFWEPMKV 176
            LK S PP   + GSS  L WE + V
Sbjct: 1325 LKLSIPPNLRIPGSSCMLLWEALGV 1399


>gb|ABJQ01003169.1| Ascogregarina taiwanensis Contig3503, whole genome shotgun sequence
          Length = 2213

 Score = 25.0 bits (53), Expect = 7.2
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -3

Query: 155  SCPPTSDLLGSSSQL 169
            +CPP S LLGS S L
Sbjct: 2034 ACPPNSSLLGSMSSL 1990


>gb|ABJQ01004502.1| Ascogregarina taiwanensis CLRanP155-G09.b1.ab1, whole genome
           shotgun sequence
          Length = 780

 Score = 24.6 bits (52), Expect = 9.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 152 LKNSCPPTSDLLGSSSQLFWEPMKVHD 178
           L N CP   D L +S    W+  ++HD
Sbjct: 681 LLNQCPGRCDFLSTSLDGTWKIWRLHD 761


  Database: A.taiwanensis/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 6,149,411
  Number of sequences in database:  5379
  
Lambda     K      H
   0.322    0.139    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,627,808
Number of Sequences: 5379
Number of extensions: 22219
Number of successful extensions: 79
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of query: 221
length of database: 2,049,803
effective HSP length: 83
effective length of query: 138
effective length of database: 1,603,346
effective search space: 221261748
effective search space used: 221261748
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)