TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000007_1.0 # Protein # Glutathione peroxidase 4 (GPx4) # Homo sapiens # Complete (197 letters) Database: S.parasitica/genome.fa 1445 sequences; 53,132,636 total letters Searching...................................................done Score E Sequences producing significant alignments: (bits) Value gb|GG743886.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 172 3e-43 gb|GG743915.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 135 2e-32 gb|GG744085.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 79 3e-15 gb|GG743884.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 30 2.3 gb|GG743892.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 29 3.9 gb|GG743888.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 29 3.9 gb|GG744019.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 28 5.1 gb|GG743887.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 28 5.1 gb|GG743967.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 28 6.7 gb|GG743897.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 28 6.7 gb|GG743935.1| Saprolegnia parasitica CBS 223.65 genomic scaffol... 28 8.7 >gb|GG743886.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.4, whole genome shotgun sequence Length = 1210272 Score = 172 bits (435), Expect = 3e-43 Identities = 85/164 (51%), Positives = 111/164 (67%) Frame = -2 Query: 30 ASRDDWRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHAR 89 A+ D A+S E + D+ GH V ++ YRG VC+V NVAS G T++NYTQLV+L + Sbjct: 1162424 ATTIDPTLAKSFFELESYDMQGHCVPMETYRGRVCLVVNVASA*GLTKLNYTQLVELDNK 1162245 Query: 90 YAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKI 149 Y + GL+ILA+PCNQFG QEPG+NEEI F AG+N F F K VNGD+ P++ ++K Sbjct: 1162244 YRDRGLQILAYPCNQFGGQEPGTNEEIMAFVAGFNATFPFFEKADVNGDNTQPVYAYLK- 1162068 Query: 150 QPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 193 K G LG+AIKWNFTKFL+D+NG KRY P P+ E D+ Sbjct: 1162067 -SKLTGTLGSAIKWNFTKFLVDRNGQPFKRYSPQTAPMDFEADI 1161939 Score = 139 bits (349), Expect = 3e-33 Identities = 71/156 (45%), Positives = 98/156 (62%) Frame = -2 Query: 38 ARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRI 97 A+S + + ++DG V + +RG VC+V NVAS G T+VNYTQLV L + E GL+I Sbjct: 1158845 AKSFFDLGSNNMDGQRVPMATFRGRVCLVVNVASA*GLTKVNYTQLVQLDDKLRERGLQI 1158666 Query: 98 LAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGIL 157 LA+PCNQFG QEPG+N EI F A + V+F +F K VNG+ ++ ++K + G Sbjct: 1158665 LAYPCNQFGGQEPGTNAEIMAFVAKFGVRFPLFEKADVNGEHTQEVYAFLKDRLPGD--- 1158495 Query: 158 GNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 193 I WNF KFL+D++G VKRY P P +E D+ Sbjct: 1158494 ---ITWNFAKFLVDRHGQPVKRYDPNVAPFDLEADI 1158396 Score = 138 bits (348), Expect = 4e-33 Identities = 69/157 (43%), Positives = 100/157 (63%), Gaps = 1/157 (0%) Frame = -3 Query: 38 ARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQU-GKTEVNYTQLVDLHARYAECGLR 96 A S +E S+K+ DG +++ K+ VC+V NVA + ++NYTQLV+L RY + GL+ Sbjct: 1159945 ASSFYELSSKNTDGVEISMAKFTSRVCLVVNVAGAS*SQAQLNYTQLVELDRRYRDRGLQ 1159766 Query: 97 ILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGI 156 IL +PCNQF QEPG+N+EI FA + V F + K VNG P++K++K K +G Sbjct: 1159765 ILLYPCNQFANQEPGTNDEILAFARSFGVTFPVMEKADVNGSKTQPVFKYLK--SKLRGT 1159592 Query: 157 LGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 193 + IKWN+TKFLID+NG KR+G P+ + D+ Sbjct: 1159591 FTSTIKWNYTKFLIDRNGQPYKRFGTFTPPIKLIDDI 1159481 >gb|GG743915.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.33, whole genome shotgun sequence Length = 345601 Score = 135 bits (341), Expect = 2e-32 Identities = 70/143 (48%), Positives = 90/143 (62%) Frame = +1 Query: 51 GHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEP 110 G V++ + G VC+V NVASQ G +NYT L +L R+ GLRILAFPCNQF QEP Sbjct: 140389 GSTVSMAAFAGSVCLVVNVASQ*GLATLNYTHLAELDRRFRPLGLRILAFPCNQFAGQEP 140568 Query: 111 GSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLI 170 GS EI+EFA G+ F +F+K VNG P+++ +K G LG +IKWNFTKFL+ Sbjct: 140569 GSEREIREFANGFGATFPIFAKGDVNGAKTQPVFRSLKAHL--TGTLGASIKWNFTKFLV 140742 Query: 171 DKNGCVVKRYGPMEEPLVIEKDL 193 +NG KRY P PL + D+ Sbjct: 140743 RRNGQPFKRYSPTTPPLRLLDDI 140811 >gb|GG744085.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.203, whole genome shotgun sequence Length = 29623 Score = 79.0 bits (193), Expect = 3e-15 Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 15/126 (11%) Frame = +1 Query: 80 YTQLVD--LHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSK----- 132 YT D L+ +Y + GL IL FPCNQFG QEPGS +I Y+V F +F K Sbjct: 21862 YTWAYD*ALYTKYHDQGLEILGFPCNQFGAQEPGSMRDILALTHHYDVTFPIFQKVRSMA 22041 Query: 133 --------ICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPME 184 + VNG DA P++ ++ G + N +KWNF+KFL+ +G RY P Sbjct: 22042 WAQLGMD*VDVNGHDADPVFAYLTSVLAGS--ITNDVKWNFSKFLL-AHGQPYARYAPTT 22212 Query: 185 EPLVIE 190 P IE Sbjct: 22213 SPASIE 22230 >gb|GG743884.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.2, whole genome shotgun sequence Length = 1567649 Score = 29.6 bits (65), Expect = 2.3 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = -2 Query: 77 EVNYTQLVDLHARYAECGLRILAF 100 ++NYT +D HAR+ +CGL F Sbjct: 189286 DINYTL*LDAHARFVQCGLGYTEF 189215 Score = 28.1 bits (61), Expect = 6.7 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 5/35 (14%) Frame = -1 Query: 142 PLWKWMKIQPKGKGI-----LGNAIKWNFTKFLID 171 PLWK P+ + I G ++WNFT+ D Sbjct: 1490003 PLWKPTSSMPRARSINT*RNTGTTMRWNFTRLAAD 1489899 >gb|GG743892.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.10, whole genome shotgun sequence Length = 790954 Score = 28.9 bits (63), Expect = 3.9 Identities = 10/33 (30%), Positives = 19/33 (57%) Frame = -2 Query: 33 DDWRCARSMHEFSAKDIDGHMVNLDKYRGFVCI 65 +DWRC ++ D+DG+++ D+ G V + Sbjct: 530622 NDWRCRGLQRIWTTADVDGNVLRRDRIGGVVVV 530524 Score = 28.9 bits (63), Expect = 3.9 Identities = 10/33 (30%), Positives = 19/33 (57%) Frame = +2 Query: 33 DDWRCARSMHEFSAKDIDGHMVNLDKYRGFVCI 65 +DWRC ++ D+DG+++ D+ G V + Sbjct: 513935 NDWRCRGLQRIWTTADVDGNVLRRDRIGGVVVV 514033 >gb|GG743888.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.6, whole genome shotgun sequence Length = 961754 Score = 28.9 bits (63), Expect = 3.9 Identities = 35/176 (19%), Positives = 67/176 (38%), Gaps = 15/176 (8%) Frame = -1 Query: 8 RLLKPALLCGALAAPGLAGTMCASRDDWR----CARSMHEFS-------AKDIDGHMVNL 56 RL + G A+ G + + +S+ WR H A +DG ++++ Sbjct: 836441 RLPRDCRRLGLSASRGASTSSPSSQTSWRPDPATGSRYHSMGTSGFPDVAGAVDGAVIDI 836262 Query: 57 DKY---RGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSN 113 ++ GF ++ G +N VD R+ G+R +FP + G Sbjct: 836261 ERPTDDEGFY-------NRHGDPSLNVQAAVDASTRFMSVGMRPGSFPDEKIG------- 836124 Query: 114 EEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKI-QPKGKGILGNAIKWNFTKF 168 Y + + + GD + L+ W+ I +G G+ + ++N+T F Sbjct: 836123 --------SYTISRRQSVGMHIIGDVDYTLFPWLLIPHEEGSGLTRSQRRFNYTTF 835980 >gb|GG744019.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.137, whole genome shotgun sequence Length = 98214 Score = 28.5 bits (62), Expect = 5.1 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = -1 Query: 15 LCGALAAPG-LAGTMCASRDDWRCARSMHEFSAKDIDGHM 53 L GA AAP L + + D WR A +H F A D+ M Sbjct: 47517 LLGAKAAPAAL*KGIGVTADTWRLAACLHRFEAADVGSEM 47398 >gb|GG743887.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.5, whole genome shotgun sequence Length = 1129684 Score = 28.5 bits (62), Expect = 5.1 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +3 Query: 17 GALAAPGLAGTMCASRDDWRCA 38 GA AAPG AG+ WRCA Sbjct: 522234 GATAAPGCAGSCLRRATPWRCA 522299 >gb|GG743967.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.85, whole genome shotgun sequence Length = 148989 Score = 28.1 bits (61), Expect = 6.7 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%) Frame = -3 Query: 6 LCRL--LKPALLCGALAAPGLAGTMCASRDDWRCARSMHEF 44 LCRL AL C A APG G C R + A +F Sbjct: 11200 LCRLDGRPAALSCSAARAPGRRGATCCRRSQCQLAAGRKQF 11078 >gb|GG743897.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.15, whole genome shotgun sequence Length = 605348 Score = 28.1 bits (61), Expect = 6.7 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +2 Query: 21 APGLAGTMCASRDDWRCARSMHEFSAKDIDGH 52 APG A A RDD + AR H AK++ G+ Sbjct: 499574 APGAADEPMARRDDGQEARGNHPNEAKEVHGN 499669 >gb|GG743935.1| Saprolegnia parasitica CBS 223.65 genomic scaffold supercont1.53, whole genome shotgun sequence Length = 226202 Score = 27.7 bits (60), Expect = 8.7 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +1 Query: 16 CGALAAPGLAGTMCASRDDWRCARS 40 CG +P AGT C R WR R+ Sbjct: 31297 CGTRRSPSHAGTRCHRRQSWRA*RA 31371 Database: S.parasitica/genome.fa Posted date: Feb 9, 2011 9:02 AM Number of letters in database: 53,132,636 Number of sequences in database: 1445 Lambda K H 0.324 0.140 0.456 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,924,059 Number of Sequences: 1445 Number of extensions: 265034 Number of successful extensions: 1559 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 169 Number of HSP's successfully gapped in prelim test: 52 Number of HSP's that attempted gapping in prelim test: 1021 Number of HSP's gapped (non-prelim): 859 length of query: 197 length of database: 17,710,878 effective HSP length: 98 effective length of query: 99 effective length of database: 17,569,268 effective search space: 1739357532 effective search space used: 1739357532 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 60 (27.7 bits)