TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000007_1.0 # Protein # Glutathione peroxidase 4 (GPx4) # Homo sapiens # Complete (197 letters) Database: C.parvum/genome.fa 8 sequences; 9,102,324 total letters Searching........done Score E Sequences producing significant alignments: (bits) Value gb|CM000431.1| Cryptosporidium parvum Iowa II chromosome 3, whol... 97 2e-21 gb|CM000432.1| Cryptosporidium parvum Iowa II chromosome 4, whol... 33 0.053 gb|CM000435.1| Cryptosporidium parvum Iowa II chromosome 7, whol... 27 2.2 gb|CM000429.1| Cryptosporidium parvum Iowa II chromosome 1, whol... 26 4.9 gb|CM000434.1| Cryptosporidium parvum Iowa II chromosome 6, whol... 26 6.4 >gb|CM000431.1| Cryptosporidium parvum Iowa II chromosome 3, whole genome shotgun sequence Length = 1099352 Score = 97.1 bits (240), Expect = 2e-21 Identities = 56/153 (36%), Positives = 89/153 (58%), Gaps = 4/153 (2%) Frame = +1 Query: 38 ARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRI 97 ++S++ ++ ++G+ ++ +G V +VTNVAS+ G T+ Y Q+V +++ +A GL I Sbjct: 141775 SKSVYSYTLTTLEGNPFPMESLKGKVVMVTNVASKCGYTKSYYKQMVRIYSVFAPLGLEI 141954 Query: 98 LAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQP----KG 153 + P +F QE +EI++FA +NVKF + VNG DA + +K + Sbjct: 141955 IGLPSREFMGQEFEDPKEIRKFADSHNVKFPLMEICKVNGPDALEFVQKLKRETPELYDE 142134 Query: 154 KGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEP 186 K +AIKWNF++FLIDKNG VV G EP Sbjct: 142135 KSNTLSAIKWNFSRFLIDKNGKVVAFRGTRTEP 142233 Score = 26.6 bits (57), Expect = 3.8 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -3 Query: 161 IKWNFTKFLIDKNGCVVKRYGPMEEPLVIE 190 + +NF+ F I NG +K P+E P I+ Sbjct: 948093 VSYNFSNFEIVANGRYIKVISPLEPPRAIQ 948004 >gb|CM000432.1| Cryptosporidium parvum Iowa II chromosome 4, whole genome shotgun sequence Length = 1104417 Score = 32.7 bits (73), Expect = 0.053 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 14/77 (18%) Frame = -3 Query: 105 FGKQEPGSNEEIKEFAAGYN---------VKFDMFSKICVNGDDAHPLWKWMKI-----Q 150 F + +N+E+KE GY + ++ S + D+ +PL+KWM+ Sbjct: 230530 FSDLQEKTNDELKEDELGYEGDSEGIGRKILEELLSTLKELSDEGYPLFKWMESVMNLKN 230351 Query: 151 PKGKGILGNAIKWNFTK 167 P + L AIKW K Sbjct: 230350 PGDRETLSKAIKWGQRK 230300 Score = 25.4 bits (54), Expect = 8.4 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = +2 Query: 98 LAFPCNQFGKQEPGSNEEIKEFAAGY-NVKFDMFSKIC 134 LA N+ K+ SN+E KEF ++ D+ K+C Sbjct: 548294 LAVEMNENSKKRQDSNDEKKEFVISVSSIDRDILEKVC 548407 >gb|CM000435.1| Cryptosporidium parvum Iowa II chromosome 7, whole genome shotgun sequence Length = 1278458 Score = 27.3 bits (59), Expect = 2.2 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = +2 Query: 98 LAFPCNQFGKQEPGSNEEIKEFAAGYNV 125 L FP EPGSN+E K F G + Sbjct: 146669 LPFPHPTSNNSEPGSNDETKSFTFGQGI 146752 >gb|CM000429.1| Cryptosporidium parvum Iowa II chromosome 1, whole genome shotgun sequence Length = 875659 Score = 26.2 bits (56), Expect = 4.9 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +3 Query: 170 IDKNGCVVKRYGPMEEPLVIEKD 192 IDKNGC+VK+ G ++ +I KD Sbjct: 568554 IDKNGCIVKKKG-KDKMQIIGKD 568619 >gb|CM000434.1| Cryptosporidium parvum Iowa II chromosome 6, whole genome shotgun sequence Length = 1332857 Score = 25.8 bits (55), Expect = 6.4 Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 6/99 (6%) Frame = -3 Query: 52 HMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPG 111 H+++ + Y+ V I +++ K + + LV L RY + C+ K E Sbjct: 127374 HLIDQNNYQ--VSIYRIPSNKFNKIQTKVSSLVMLQHRYMVRYYQCWVEKCDNT-KDERN 127204 Query: 112 SNEEI------KEFAAGYNVKFDMFSKICVNGDDAHPLW 144 E+ EF FD+F K + D H +W Sbjct: 127203 DQEDFILLYIQSEFMEENTTLFDLFEKGKITQRDNHLIW 127087 Database: C.parvum/genome.fa Posted date: Feb 9, 2011 9:02 AM Number of letters in database: 9,102,324 Number of sequences in database: 8 Lambda K H 0.324 0.140 0.456 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,004,947 Number of Sequences: 8 Number of extensions: 26780 Number of successful extensions: 74 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 63 Number of HSP's gapped (non-prelim): 35 length of query: 197 length of database: 3,034,108 effective HSP length: 86 effective length of query: 111 effective length of database: 3,033,420 effective search space: 336709620 effective search space used: 336709620 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 53 (25.0 bits)