TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000007_1.0 # Protein # Glutathione peroxidase 4 (GPx4) #
Homo sapiens # Complete
         (197 letters)

Database: C.owczarzaki/genome.fa 
           89 sequences; 28,043,798 total letters

Searching........................................................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

supercontig_1.15 of Capsaspora owczarzaki ATCC 30864                   40   7e-04
supercontig_1.2 of Capsaspora owczarzaki ATCC 30864                    31   0.57 
supercontig_1.9 of Capsaspora owczarzaki ATCC 30864                    28   4.8  
supercontig_1.1 of Capsaspora owczarzaki ATCC 30864                    27   6.3  
supercontig_1.10 of Capsaspora owczarzaki ATCC 30864                   27   8.2  
supercontig_1.4 of Capsaspora owczarzaki ATCC 30864                    27   8.2  

>supercontig_1.15 of Capsaspora owczarzaki ATCC 30864
          Length = 930169

 Score = 40.4 bits (93), Expect = 7e-04
 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 37/105 (35%)
 Frame = -3

Query: 75    KTEVNYTQLVDLHARYAECGLRILAFPCNQF----------------------------- 105
             +T+ NYT+L  +++   + G  I+AFPC QF                             
Sbjct: 29027 RTKSNYTELQQIYSELKDKGFEIIAFPCAQFLNVSVDTARVLHHRPLA*TLILIFTLFFF 28848

Query: 106   -------GKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGDDAHP 142
                     +QEP +  +I +F    + V F +  K  VNG +AHP
Sbjct: 28847 FFFFFCNQQQEPETGAKILDFGKTRFGVTFQLMEKTKVNGQEAHP 28713



 Score = 27.3 bits (59), Expect = 6.3
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 164   NFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 193
             N  +FLID+ G  ++R+G    P  IE ++
Sbjct: 28473 NKLQFLIDRTGSTIQRFGASVRPKEIEPEI 28384


>supercontig_1.2 of Capsaspora owczarzaki ATCC 30864
          Length = 2668053

 Score = 30.8 bits (68), Expect = 0.57
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +3

Query: 84      VDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKIC 134
               ++L + YA   +  LAF CN  G   P S+ +     + YN+ FD + ++C
Sbjct: 2572323 LELGSPYARAMVLGLAFACNIGGMLTPISSPQNAVVVSIYNIDFDAWVEVC 2572475


>supercontig_1.9 of Capsaspora owczarzaki ATCC 30864
          Length = 1380613

 Score = 27.7 bits (60), Expect = 4.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -1

Query: 16     CGALAAPGLAGTMCASRDDWRCARSM 41
              C   AA  LAG  C  R + RC RS+
Sbjct: 152338 CSCRAAIDLAGKCCGGRGETRCCRSV 152261


>supercontig_1.1 of Capsaspora owczarzaki ATCC 30864
          Length = 3794667

 Score = 27.3 bits (59), Expect = 6.3
 Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 9/85 (10%)
 Frame = -1

Query: 78      VNYTQLVDLHARY-----AECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSK 132
               VN    +  H RY     A CG  +L       G Q  G++                +S+
Sbjct: 2978286 VNVRHRIVFHERYEFTVTASCGSELL-------GNQHCGTSS---------------WSR 2978173

Query: 133     ICV--NGDDAHPLWKWMK--IQPKG 153
               +CV    +D H +W W K  IQP G
Sbjct: 2978172 LCVLQGSNDRHAMWLWWKLVIQPYG 2978098



 Score = 27.3 bits (59), Expect = 6.3
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 155     GILGNAIKWNFTKFLID-KNGCVVKRYGPMEEPLVIEKDL 193
               GI  N I WN   FL+D ++ C V     ++E + I +D+
Sbjct: 1846935 GISRNQISWNNLNFLVDSQSPCCV*GLAYLDEQMKIHRDI 1847054


>supercontig_1.10 of Capsaspora owczarzaki ATCC 30864
          Length = 1357310

 Score = 26.9 bits (58), Expect = 8.2
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = +3

Query: 30      ASRDDWRC--ARSM-HEFSAKDIDGHMVNLDKYR 60
               A + DWRC  AR      S +D D  MVN+D+Y+
Sbjct: 1241787 AHQSDWRCWSARDC*STQSEQDPDNAMVNIDRYK 1241888


>supercontig_1.4 of Capsaspora owczarzaki ATCC 30864
          Length = 2141673

 Score = 26.9 bits (58), Expect = 8.2
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
 Frame = -2

Query: 2      SLGRLCRLLKPALLCGALAAPGLAGTMCASR----DDWRCARSMHEFS 45
              SL  LCRL      CG  +    +GT+        +DWR A+  H+FS
Sbjct: 902039 SL*SLCRLRGTCFSCGRASKANHSGTLLHCHLHLGNDWR-AKGCHDFS 901899


  Database: C.owczarzaki/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 28,043,798
  Number of sequences in database:  89
  
Lambda     K      H
   0.324    0.140    0.456 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,391,196
Number of Sequences: 89
Number of extensions: 140575
Number of successful extensions: 791
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 667
Number of HSP's gapped (non-prelim): 405
length of query: 197
length of database: 9,347,932
effective HSP length: 94
effective length of query: 103
effective length of database: 9,339,566
effective search space: 961975298
effective search space used: 961975298
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)