TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000006_1.0 # Protein # Glutathione peroxidase 3 (GPx3) #
Homo sapiens # Complete
         (226 letters)

Database: A.taiwanensis/genome.fa 
           5379 sequences; 6,149,411 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJQ01002037.1| Ascogregarina taiwanensis Contig2304, whole g...    28   0.67 
gb|ABJQ01003078.1| Ascogregarina taiwanensis Contig3411, whole g...    27   1.5  
gb|ABJQ01001512.1| Ascogregarina taiwanensis Contig1732, whole g...    25   5.7  
gb|ABJQ01002261.1| Ascogregarina taiwanensis Contig2556, whole g...    25   9.7  

>gb|ABJQ01002037.1| Ascogregarina taiwanensis Contig2304, whole genome shotgun sequence
          Length = 943

 Score = 28.5 bits (62), Expect = 0.67
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
 Frame = -1

Query: 68  NVASYUGLTGQY----IELNALQEELAPFGLVILG-------FPCNQFGKQEPGENSEIL 116
           N+ASY   +  +    I L AL   ++P  L  LG       FPC+ F       +SE+ 
Sbjct: 367 NLASYQSASKSWRGFPISLAALSPSISPGLLGSLGPLRYPSGFPCDSFRSMGRALHSELS 188

Query: 117 PTLK 120
           PT+K
Sbjct: 187 PTIK 176


>gb|ABJQ01003078.1| Ascogregarina taiwanensis Contig3411, whole genome shotgun sequence
          Length = 2316

 Score = 27.3 bits (59), Expect = 1.5
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 20   SQSRGQEKSKMDCHGGISGTIYEYGALTIDGEEYI 54
            S + G ++S   CHGGI G I+   A +   +E +
Sbjct: 1050 SDTNGVKRSSEACHGGILGVIHNTQAYSFSFKEVL 1154


>gb|ABJQ01001512.1| Ascogregarina taiwanensis Contig1732, whole genome shotgun sequence
          Length = 801

 Score = 25.4 bits (54), Expect = 5.7
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -1

Query: 36  ISGTIYEYGALTIDGEEY 53
           I    +E G LTIDGEEY
Sbjct: 309 IHQAFFEAGRLTIDGEEY 256


>gb|ABJQ01002261.1| Ascogregarina taiwanensis Contig2556, whole genome shotgun sequence
          Length = 1057

 Score = 24.6 bits (52), Expect = 9.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 118 TLKYVRPGGGFVPNFQLFEKGDVNG 142
           T K + P G    NFQ  +KG +NG
Sbjct: 922 TQKVIAPAGKGSTNFQ*EQKGSING 996


  Database: A.taiwanensis/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 6,149,411
  Number of sequences in database:  5379
  
Lambda     K      H
   0.321    0.140    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,721,227
Number of Sequences: 5379
Number of extensions: 23803
Number of successful extensions: 99
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 99
length of query: 226
length of database: 2,049,803
effective HSP length: 84
effective length of query: 142
effective length of database: 1,597,967
effective search space: 226911314
effective search space used: 226911314
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)