TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000004_1.0 # Protein # Glutathione peroxidase 1 (GPx1) # Homo sapiens # Complete (203 letters) Database: C.owczarzaki/genome.fa 89 sequences; 28,043,798 total letters Searching........................................................................................done Score E Sequences producing significant alignments: (bits) Value supercontig_1.15 of Capsaspora owczarzaki ATCC 30864 30 1.3 supercontig_1.1 of Capsaspora owczarzaki ATCC 30864 29 2.3 supercontig_1.3 of Capsaspora owczarzaki ATCC 30864 28 5.1 supercontig_1.16 of Capsaspora owczarzaki ATCC 30864 27 6.7 supercontig_1.2 of Capsaspora owczarzaki ATCC 30864 27 6.7 supercontig_1.12 of Capsaspora owczarzaki ATCC 30864 27 8.7 supercontig_1.7 of Capsaspora owczarzaki ATCC 30864 27 8.7 >supercontig_1.15 of Capsaspora owczarzaki ATCC 30864 Length = 930169 Score = 29.6 bits (65), Expect = 1.3 Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 31/104 (29%) Frame = -3 Query: 52 TVRDYTQMNELQRRLGPRGLVVLGFPCNQF-----------GHQENAKNEEILNSLKYV- 99 T +YT++ ++ L +G ++ FPC QF H+ A ++ +L + Sbjct: 29024 TKSNYTELQQIYSELKDKGFEIIAFPCAQFLNVSVDTARVLHHRPLA*TLILIFTLFFFF 28845 Query: 100 ---------RPGGG----------FEPNFMLFEKCEVNGAGAHP 124 P G F F L EK +VNG AHP Sbjct: 28844 FFFFCNQQQEPETGAKILDFGKTRFGVTFQLMEKTKVNGQEAHP 28713 >supercontig_1.1 of Capsaspora owczarzaki ATCC 30864 Length = 3794667 Score = 28.9 bits (63), Expect = 2.3 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Frame = +2 Query: 119 GAGAHP---LFAFLREALPAPSDDATALMTDPKLITWSPVCR-NDVAWNFEK 166 GAG+ P LFA +ALP AT LM P + T P ND W F + Sbjct: 1194398 GAGSRPIAGLFALAADALPMLVMLATGLMRMPPICTMGPGFG*NDPGWWFTR 1194553 Score = 28.1 bits (61), Expect = 3.9 Identities = 19/62 (30%), Positives = 31/62 (50%) Frame = -3 Query: 137 SDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALL 196 SDDA++ DP + W+ + + E + GPDG P+ +T + P ++ALL Sbjct: 345754 SDDASSSSFDP-VGFWTTYVK--MVHGKEAMVRGPDGTPMSTDEMIDRTKCLHPKVQALL 345584 Query: 197 SQ 198 Q Sbjct: 345583 DQ 345578 >supercontig_1.3 of Capsaspora owczarzaki ATCC 30864 Length = 2526540 Score = 27.7 bits (60), Expect = 5.1 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 1/90 (1%) Frame = +1 Query: 113 EKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVG-P 171 E+ V +G + A ALP P+ T T + T + N AW + L P Sbjct: 750010 EEQHVTTSGLPQIAAAAEFALPQPTTTGTLPSTSATVTTTTDANANANAWTSQPALAWLP 750189 Query: 172 DGVPLRRYSRRFQTIDIEPDIEALLSQGPS 201 DG+ R +I P ++ LL Q P+ Sbjct: 750190 DGIIATHCLRSSPSI---PALKLLLEQIPT 750270 >supercontig_1.16 of Capsaspora owczarzaki ATCC 30864 Length = 797998 Score = 27.3 bits (59), Expect = 6.7 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = -2 Query: 67 GPRGLVVLGFPCNQFGHQENAKNEEILNS 95 GPR PC +G Q++ KN E L + Sbjct: 727569 GPRNFTTGNVPCITYGQQQDFKNTETLRN 727483 >supercontig_1.2 of Capsaspora owczarzaki ATCC 30864 Length = 2668053 Score = 27.3 bits (59), Expect = 6.7 Identities = 16/50 (32%), Positives = 22/50 (44%) Frame = -2 Query: 111 LFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDV 160 L KC N A + A + + P + + A PK WS VCR+ V Sbjct: 2028887 LCRKCHWNKARYGSIGAAIPKPRPPAAANTQAAAVRPKACRWSGVCRSVV 2028738 >supercontig_1.12 of Capsaspora owczarzaki ATCC 30864 Length = 1052152 Score = 26.9 bits (58), Expect = 8.7 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Frame = +1 Query: 83 HQENAKNEEILNSL--KYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDA 140 H +A N + + +RP G P+ + +KC GAG + F+ +++ + Sbjct: 686320 HDPSAVNSTVSQDVCETEIRPIAGCYPDEL--QKCLQRGAGQNKWIVFIGDSVTRKMFER 686493 Query: 141 TALMTDPKL 149 TAL+ P++ Sbjct: 686494 TALLLGPEV 686520 >supercontig_1.7 of Capsaspora owczarzaki ATCC 30864 Length = 1544042 Score = 26.9 bits (58), Expect = 8.7 Identities = 19/61 (31%), Positives = 32/61 (52%) Frame = +1 Query: 138 DDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALLS 197 DDA++ DP + W+ + +A E + GPDG P+ + +T + P ++ALL Sbjct: 1170349 DDASSGSFDP-VGFWTTYVK--MAHGKEAMVRGPDGKPMSTDAMIRKTECLHPKVQALLD 1170519 Query: 198 Q 198 Q Sbjct: 1170520 Q 1170522 Database: C.owczarzaki/genome.fa Posted date: Feb 9, 2011 9:02 AM Number of letters in database: 28,043,798 Number of sequences in database: 89 Lambda K H 0.321 0.139 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,906,803 Number of Sequences: 89 Number of extensions: 109917 Number of successful extensions: 483 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 386 Number of HSP's gapped (non-prelim): 262 length of query: 203 length of database: 9,347,932 effective HSP length: 94 effective length of query: 109 effective length of database: 9,339,566 effective search space: 1018012694 effective search space used: 1018012694 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 58 (26.9 bits)