TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000004_1.0 # Protein # Glutathione peroxidase 1 (GPx1) #
Homo sapiens # Complete
         (203 letters)

Database: A.taiwanensis/genome.fa 
           5379 sequences; 6,149,411 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJQ01000559.1| Ascogregarina taiwanensis Contig671, whole ge...    27   1.3  
gb|ABJQ01001990.1| Ascogregarina taiwanensis Contig2252, whole g...    27   1.6  
gb|ABJQ01004651.1| Ascogregarina taiwanensis CLRanP152-F05.b1.ab...    26   3.7  
gb|ABJQ01003202.1| Ascogregarina taiwanensis Contig3536, whole g...    25   4.8  
gb|ABJQ01003200.1| Ascogregarina taiwanensis Contig3534, whole g...    25   6.3  
gb|ABJQ01002750.1| Ascogregarina taiwanensis Contig3068, whole g...    25   6.3  
gb|ABJQ01000019.1| Ascogregarina taiwanensis Contig19, whole gen...    25   8.2  

>gb|ABJQ01000559.1| Ascogregarina taiwanensis Contig671, whole genome shotgun sequence
          Length = 901

 Score = 27.3 bits (59), Expect = 1.3
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
 Frame = +1

Query: 16  VYAFSARPLAGGEPVSLGSLR---GKVLLIENVASLXGTTVRDYTQMNE--LQRRLGPRG 70
           ++ F+ RPL    PV +   R    +  L +   +  G        +       ++ P G
Sbjct: 358 LFGFATRPLINPAPVLVAGARFFSAEASLAQPAVTQAGLNAPTSIVIGNKITGTKVAPEG 537

Query: 71  LVVLGFPCNQFGHQENAKNEEI 92
             +LGF CN+  H+   K  ++
Sbjct: 538 QYILGFTCNKCDHRTARKFSKV 603


>gb|ABJQ01001990.1| Ascogregarina taiwanensis Contig2252, whole genome shotgun sequence
          Length = 1639

 Score = 26.9 bits (58), Expect = 1.6
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 8/50 (16%)
 Frame = +1

Query: 132  ALPAPSDDATALMTDPKLITWSPVCRN------DVAWNFEKF--LVGPDG 173
            +LPA  +D   L TDP     +PVC N      D  W+      L GP G
Sbjct: 1042 SLPACLEDVLQLQTDPLARRTAPVCPNGEQCSCDEVWDSNDMYTLAGPVG 1191


>gb|ABJQ01004651.1| Ascogregarina taiwanensis CLRanP152-F05.b1.ab1, whole genome
           shotgun sequence
          Length = 713

 Score = 25.8 bits (55), Expect = 3.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 134 PAPSDDATALMTDPKLITW 152
           P P D   +L+ DP+L TW
Sbjct: 155 PVPGDYVQSLLVDPRLETW 99


>gb|ABJQ01003202.1| Ascogregarina taiwanensis Contig3536, whole genome shotgun sequence
          Length = 2456

 Score = 25.4 bits (54), Expect = 4.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 17   YAFSARPLAGGEPVSLGSLRGKVLLI 42
            Y  +  PLAGG P+S+GS R + L +
Sbjct: 1710 YRSTDGPLAGGCPISMGSGRRRRLTV 1787


>gb|ABJQ01003200.1| Ascogregarina taiwanensis Contig3534, whole genome shotgun sequence
          Length = 2982

 Score = 25.0 bits (53), Expect = 6.3
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +2

Query: 23   PLAGGEPVSLGSLRGKVLLI 42
            PLAGG P+S+GS R + L +
Sbjct: 2528 PLAGGCPISMGSGRRRRLTV 2587


>gb|ABJQ01002750.1| Ascogregarina taiwanensis Contig3068, whole genome shotgun sequence
          Length = 1923

 Score = 25.0 bits (53), Expect = 6.3
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 7/45 (15%)
 Frame = +3

Query: 56   YTQMNELQRRL-GPRGLVVLGF------PCNQFGHQENAKNEEIL 93
            YT  +E +  + G RG V+  F      PC+  GHQ   K + +L
Sbjct: 1296 YTVCHEKREEI*GSRGNVISPFSGIHFSPCHILGHQRGCKADPVL 1430


>gb|ABJQ01000019.1| Ascogregarina taiwanensis Contig19, whole genome shotgun sequence
          Length = 790

 Score = 24.6 bits (52), Expect = 8.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 135 APSDDATALMTDPKLITWSPVCRNDVAWNF 164
           AP    +  +T+  L++W P C + V  NF
Sbjct: 576 APVISGS*FVTNVTLVSWDPACSHAVGPNF 487


  Database: A.taiwanensis/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 6,149,411
  Number of sequences in database:  5379
  
Lambda     K      H
   0.321    0.139    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,478,592
Number of Sequences: 5379
Number of extensions: 22538
Number of successful extensions: 113
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of query: 203
length of database: 2,049,803
effective HSP length: 83
effective length of query: 120
effective length of database: 1,603,346
effective search space: 192401520
effective search space used: 192401520
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)