CLUSTAL FORMAT for T-COFFEE Version_7.54 [http://www.tcoffee.org] [MODE: ], CPU=1.70 sec, SCORE=87, Nseq=21, Len=297 C_merolae KD---------------------------------------------------------- C_owczarzaki ------------------------------------------------------------ C_owczarzaki_1 ------------------------------------------------------------ E_siliculosus ------------------------------------------------------------ H_arabidopsis ------------------------------------------------------------ N_gruberi ------------------------------------------------------------ P_pallidum ------------------------------------------------------------ P_tricornutum ------------------------------------------------------------ P_ultimum MTDNS------------------------------------------------------- P_ultimum_1 MAAAS------------------------------------------------------- C_elegans MTTKKFRM----------EDV----------------GLS-------------------- O_lucimarinus ------------------------------------------------------------ P_infestans MSSSN------------------------------------------------------- H_sapiensSelR1 MSF--------------------------------------------------------- H_sapiensSelR2 MGAGAETG---RGQRAAPERAARLLWLLRGLTLGTAPRRAVR------------------ H_sapiensSelR3 MSPRRTLP----------RPLSLCLSLCLCLCLAAALGSAQS------------------ S_cerevisiae MNKWSRLYVI-TVRRTFPGRRNIVLTQ------YWNKS---------------------- S.parasitica1 ------------------------------------------------------------ S_parasitica2 KADRHAVDAVTLVRRVLEA---FVLEDV---THVAAASRADNLDAVAIFVRDGRDRTGKR S_parasitica3 ------------------------------------------------------------ T_trahens ------------------------------------------------------------ C_merolae ------------------------------------------------------------ C_owczarzaki ------------------------------------------------------------ C_owczarzaki_1 ------------------------------------------------------------ E_siliculosus ------------------------------------------------------------ H_arabidopsis ------------------------------------------------------------ N_gruberi ------------------------------------------------------------ P_pallidum ------------------------------------------------------------ P_tricornutum ------------------------------------------------------------ P_ultimum ------------------------------------------------------------ P_ultimum_1 ------------------------------------------------------------ C_elegans ---------------------------------------------------------KL- O_lucimarinus ------------------------------------------------------------ P_infestans ------------------------------------------------------------ H_sapiensSelR1 ------------------------------------------------------------ H_sapiensSelR2 -------------------GQAGGG---------------------GPGTGPGLG--EA- H_sapiensSelR3 ------------------------------------------------------G--SC- S_cerevisiae ------------------------------------------------------------ S.parasitica1 ------------------------------------------------------------ S_parasitica2 VEERGPAAARVELVARLVQGRVAAGAVVDALFVVLVVLARASALRAFLAQHAELLLGELG S_parasitica3 ------------------------------------------------------------ T_trahens ------------------------------------------------------------ C_merolae -------WRALTEEDWKARLTPMQFEVARRAGTERPFTGEYWNE-KRTGIYRCVCCGTPL C_owczarzaki -------------------------------------TGALYHN-TKPGVYSCVCCGQML C_owczarzaki_1 ------------------------------------------------------------ E_siliculosus ------------------------------------------------------------ H_arabidopsis ------------------------------------------------------------ N_gruberi ------------------------------------------------------------ P_pallidum -----------SEDEWKVKLSPEQFHVLRQKGTERAGTGQYNKHS-EEGVYNCAGCETPL P_tricornutum -------TEHDTESMWRGLLTREEFRVLRSHGTERPRSHRYDTWYPDTGCFACRACGLPL P_ultimum ------SRVTLSDVEWKAQLTPVQYQVLRLKGTERAGTGEYNKHY-QDGTYVCAGCKAPL P_ultimum_1 ------ERANRSETEWKAQLTPLQYQVLRLKGTEPAGSGEYDAHFAASGTYVCSGCHAPL C_elegans KVE-K-NPKDVKQTEWKSVLPNEVYRVARESGTETPHTGGFNDH-FEKGRYVCLCCGSEL O_lucimarinus --------VEKPESEWKQELDAQAFQVLRQKGTEPARTGEYDKFYPSEGHFVCRGCGTPL P_infestans ------DVVKLSNEEWKQRLTPMQFQVLRLKGTERAGTGEYNKNK-ETGVYVCAGCKTPV H_sapiensSelR1 --------------------------------CSFFGGEVFQNH-FEPGVYVCAKCGYEL H_sapiensSelR2 GSL-ATCELPLAKSEWQKKLTPEQFYVTREKGTEPPFSGIYLNN-KEAGMYHCVCCDSPL H_sapiensSelR3 RDK-KNCKVVFSQQELRKRLTPLQYHVTQEKGTESAFEGEYTHH-KDPGIYKCVVCGTPL S_cerevisiae ----KKMSDESNDVKWNDALTPLQLMVLRDKATERPNTGAYLHTN-ESGVYHCANCDRPL S.parasitica1 ------KPIPTTDDEWKAKLTPWEYRVLRQKGTEPPGSGPLNKHF-EKGTYVCAGCHTPL S_parasitica2 PPLAF-AEVDLTPGEWQVKLSKEQFRILREKGTEAKGTGEYNKHY-ETGVYHCAGCDAPL S_parasitica3 -------PFNLPDGEWRAKLSPEQYRVLRQKGTERPGTGAFTKHN-ALGTYLCAGCDAPL T_trahens ------------------------------------------------------------ C_merolae FSSETKFDSGTGWPSFYAPLSKEA-------VKERRDLSH-GMIRTEVLCAVCDAHLGHV C_owczarzaki FASSTKYDSGSGWPSFFDVLSKDA-------VNLSEDGAF-GMRRIEVECSSCGSHLGHV C_owczarzaki_1 -RSQAKFDSGTGWPSFYDAVDKKN-------IKTERDDKF-GMVRVEAMCNHCDSHLGHI E_siliculosus --------------------------------------------QREVRCSNCDGHLGHV H_arabidopsis YTSTTKFDSGCGWPAFYDAI-PGA-------IKTIPDAD---GRRIEIVCAKCDGHMGHV N_gruberi -----EFYKGSGWPSFWAPFKPKA-------IGYVVDKKF-GMERVEVVCTNCHSHLGHV P_pallidum YTSKSKFNSGCGWPAFFEAI-PGA-------LTIFEDRSH-GMVRTEICCKNCGGHLGHV P_tricornutum YAARAKFDSGSGWPSFGTHVQG--------AVATTVEQSPVMGKRVEIHCARCQSHLGHV P_ultimum YTSETKFDSGCGWPAFYDAI-PGA-------IKAIPDPD---GRRTEIVCAKCDGHMGHV P_ultimum_1 YTADKKFDSGCGWPAFYDVL-PHA-------I---------------------KSHLGHV C_elegans FNSDAKFWAGCGWPAFSESVGQDA------NIVRIVDRSH-GMHRTEVRCKTCDAHLGHV O_lucimarinus YSAKSKFDSGCGWPAFDKCY-AGA-------LKTEIDNAF-GMRRVEIMCAACDGHLGHV P_infestans YTSTTKFDSGCGWPAFYDAI-PGA-------IKAVPDAD---GRRTEIMCAKCDGHMGHV H_sapiensSelR1 FSSRSKYAHSSPWPAFTETIHAD-------SVAKRPE-H-NRSEALKVSCGKCGNGLGHE H_sapiensSelR2 FSSEKKYCSGTGWPSFSEAHGTSGSDESHTGILRRLDTSL-GSARTEVVCKQCEAHLGHV H_sapiensSelR3 FKSETKFDSGSGWPSFHDVINSEA-------ITFTDDFSY-GMHRVETSCSQCGAHLGHI S_cerevisiae YSSKAKFDARCGWPAFYEEVSPGA-------ITYHRDNSL-MPARVEICCARCGGHLGHV S.parasitica1 YSSAHKFDSGCGWPAFYDAL-PSA-------ISWVPDSD---GQRTEIVCAVCHGHMGHV S_parasitica2 YKSETKFDSGCGWPAFFDAL-PDA-------IVSQPDV---DGRRTEIICANCGGHMGHV S_parasitica3 YTSSQKFNSGCGWPAFFDAI-PNA-------IKALPDG-----SRIEIVCANCGGHMGHV T_trahens ------FDSGCGWPAFYDSV-EGA-------VARKSES-F-PDTRTEILCSACGGHIGHV :** C_merolae FP---DGP-------KPTGLRYCMNSYSLKFEP----------------------KE C_owczarzaki FD---DGP-------APTRLRYCINSVSLG--------------------------F C_owczarzaki_1 FD---DGP-------RPTGLRYCINSASIKLN-----------------------KQ E_siliculosus FP---DGP-------KPTGLRYCMNGVAMGFEP----------------------KE H_arabidopsis FKG--EGFN------TPTDERHCVNSASLVFYGNE------------------VPPQ N_gruberi FE---DGPR------DKTKLRYCINAVCLAL------------------------KK P_pallidum FKKKGEGYS------TPTDERHCVNSIS----------------------------L P_tricornutum FA---DTNTAKWDRLKTFSERHCVNGISLMYS-----------------------KN P_ultimum FKG--EGFK------TPTDERHCVNSVSLVFHAG--------------------EVP P_ultimum_1 IRG--EGHK------MPTDKRHCINSVAIVF-------------------------H C_elegans FN---DGPK------ETTGERYXINSVCMAFEK----------------------KD O_lucimarinus FEN--EGF-------SATMERHXVNSVSVKYV-----------------------PA P_infestans FKG--EGFK------TPTDERHXVNSVSLVFHASE------------------VPPQ H_sapiensSelR1 FLN--DGP-------KPGQSRFXIFSSSLKFVPKGK----------ET---SASQGH H_sapiensSelR2 FP---DGP-------GPNGQRFXINSVALKFKP---------------------RKH H_sapiensSelR3 FD---DGP-------RPTGKRYXINSAALSFTPADSSGTAEGGSGVASPAQADKAEL S_cerevisiae FEG--EGWK-QLL-NLPKDTRHXVNSASLNLK-----------------------KD S.parasitica1 FEN--EGFP------TPTNHRHCVNSISIKF-------------------------K S_parasitica2 FTG--EGFK------TPTDQRHCVNSVSVR--------------------------F S_parasitica3 FKG--EGFE------TPTDERHCVNSVSLK--------------------------F T_trahens FAG--EGFK------TPTNERHCANSVSLKFK-----------------------PK : : *. . .