genewise output
Score 56.51 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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MsrA.Thalassios    5 EVAVLASGXFWHPQRDFKRLEGVVDVIVGYTGGQKKNPTYQNIMDA--- 
                     EVA  A G FW  +  F R++GVV   VGY+ G  ++PTY+ +       
                     EVATFALGCFWGAELAFLRVQGVVGTKVGYSQGITRDPTYEKVCSGGTQ 
gi|217411035|gb  198 gggatgcgtttgggtgtccgcggggaaggttcgaacgcatgagttggac 
                     atcctctggtggcatcttgtagttgcatgacagtcgaccaaatgcggca 
                     ggagttaatcgtaagcctccactcgcacttgagttctaccaaatctcta 


MsrA.Thalassios   51 -TEAFIVEFDPSVISYEEILN---EWAAQHAPFYPS---------KCQY 
                       EA +V +D +V+SY  +L    E  A     Y +           QY 
                     HREAVMVVYDANVVSYATLLGVAMERLAVTTSSYDTYRMFEQDEDSRQY 
gi|217411035|gb  345 ccgggaggtggaggttgatcgggagacggaatttgatcatgcgggacct 
                     agacttttaacattcaccttgtctagtctccccaacagttaaaaaggaa 
                     tcagcggccctcctgcacagcgggaacccgggcctctcgtagcgctggc 


MsrA.Thalassios   87 RSAIFYCSEEQQSAAQKKIEELGKDGQRSVYVDLEPVSAFYRGEEYHQD 
                     +  ++Y + EQQ  A     E  +       ++L   S FY  EE HQ  
                     KHGVYYHNPEQQRLAH----EFSESSNNRFGIELLMASTFYDAEEDHQK 
gi|217411035|gb  492 acggttcacgccccgc    gttgtaaactgagccagtattgggggcca 
                     aagtaaaacaaagtca    atcacgaagtgtatttccctaacaaaaaa 
                     acacctcccggatctc    gtgaccccacccgcggtcttccgaatcag 


MsrA.Thalassios  136 FLDK                                              
                     +L K                                              
                     YLYK                                              
gi|217411035|gb  627 tcta                                              
                     ataa                                              
                     ttcg                                              


//
Gene 1
Gene 198 638 
  Exon 198 638 phase 0
//
>gi|217411035|gb|CM000605.1|:subseq(241500,800).pep
EVATFALGCFWGAELAFLRVQGVVGTKVGYSQGITRDPTYEKVCSGGTQHREAVMVVYDA
NVVSYATLLGVAMERLAVTTSSYDTYRMFEQDEDSRQYKHGVYYHNPEQQRLAHEFSESS
NNRFGIELLMASTFYDAEEDHQKYLYK
//
gi|217411035|gb|CM000605.1|:subseq(241500,800)	GeneWise	match	198	638	72.49	+	.	gi|217411035|gb|CM000605.1|:subseq(241500,800)-genewise-prediction-1
gi|217411035|gb|CM000605.1|:subseq(241500,800)	GeneWise	cds	198	638	0.00	+	0	gi|217411035|gb|CM000605.1|:subseq(241500,800)-genewise-prediction-1
//