genewise output
Score 64.45 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

MsrA.Thalassios    6 VAVLASGXFWHPQRDFKRLEGVVDVIVGYTGGQKKNPTYQNIMDA---- 
                     VAV   G FW  +R F +  GV    VGY GG   +PTY  +        
                     VAVFGGGCFWGLERRFFQTPGVYSTAVGYAGGSLPDPTYYEVCSGRTGH 
gi|151559144|db  277 gggtgggtttgcgccttcacggtaagggtgggatcgcattggttgcagc 
                     tcttggggtggtaggttaccgtagcctgacgggtcaccaaatgcggcga 
                     gttcgcctcgagagcccgaacgctctggcacccggcgcccgacagctac 


MsrA.Thalassios   51 TEAFIVEFDPSVISYEEILNEWAAQHAPFYPSK------CQYRSAIFYC 
                      E   V +DP  + Y  +L+ + + H P   ++       QYRS I+Y  
                     AEVVRVVYDPQKVDYLTLLDVFWSAHDPTQLNRQGNDVGTQYRSVIIYA 
gi|151559144|db  424 ggggaggtgccaggttaccggtttgcgcactaccgagggactctgaatg 
                     cattgttaacaataatcttattgccaaccatagagaatgcaagctttac 
                     tgggagctttgacttgggccgcgtgccgcggcagaccccggcccgtctg 


MsrA.Thalassios   94 SEEQQSAAQKKI----EELGKDGQRSVYVDLEPVS--AFYRGEEYHQDF 
                      +EQ+  A+         L ++G   +  +L P +   FY  EEYHQ + 
                     DDEQKRLAEATRAAFDKTLRENGYGRIVTELLPAADNPFYFAEEYHQQY 
gi|151559144|db  571 gggcaccgggacggtgaatagagtgaagagcccgggactttgggtccct 
                     aaaaagtcaccgcctaactgaagaggttcattcccaactatcaaaaaaa 
                     ttaagatgaaagtgccggaagcgcagtccgcatcttcgtctagactggc 


MsrA.Thalassios  137 LDK                                               
                     L K                                               
                     LAK                                               
gi|151559144|db  718 tga                                               
                     tca                                               
                     ggg                                               


//
Gene 1
Gene 277 726 
  Exon 277 726 phase 0
//
>gi|151559144|dbj|AP006501.2|:subseq(155800,1000).pep
VAVFGGGCFWGLERRFFQTPGVYSTAVGYAGGSLPDPTYYEVCSGRTGHAEVVRVVYDPQ
KVDYLTLLDVFWSAHDPTQLNRQGNDVGTQYRSVIIYADDEQKRLAEATRAAFDKTLREN
GYGRIVTELLPAADNPFYFAEEYHQQYLAK
//
gi|151559144|dbj|AP006501.2|:subseq(155800,1000)	GeneWise	match	277	726	76.43	+	.	gi|151559144|dbj|AP006501.2|:subseq(155800,1000)-genewise-prediction-1
gi|151559144|dbj|AP006501.2|:subseq(155800,1000)	GeneWise	cds	277	726	0.00	+	0	gi|151559144|dbj|AP006501.2|:subseq(155800,1000)-genewise-prediction-1
//