genewise output Score 74.78 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info 21 RAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKP RA +++G TV+S KII + T AGY FVEF A+ + + G+ RASSSLG-TVVSAKIILDAETHGSAGYGFVEFETREGAQAAMPILQGRR gi|298517517|gb 63 cgattcg aggtgaaacgggacgtggtgtggtgacgggcggacaccgcc gcgcctg cttccatttacacagccgagttatacgagcacctcttaggg tgcggcc gtctcactgtcggcgtcgtgtggtggcatagaaggtcgcga 70 LPGATPAKRFKLNYATYGKQ--PDNSPEYSLFVGDLTPDVDDGMLYEFF + A R+++N+A G + D +SLFVGDL VDD ML++ F VR----ALRIRINWAVQGSRRVADEDGLHSLFVGDLCKSVDDDMLHDAF gi|298517517|gb 207 gc gccacaatggcgtccggggggcctctgggttatggggaccggt tg ctgtgtagctagcggtcaaagtactttgatgactaaattaact gt gggcattgggacgggggcgcggcggtaccgcgtgcccggctgt 117 VKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLG + S +V+ D TG S+ +GFV F D + +RAL G LG AH-FSSLTSARVMWDVRTGTSREFGFVSFRDASDAERAL-KTMGGTMLG gi|298517517|gb 342 gc ttacatgcgatggcagatcgtgtgttcggagggcgc aaaggaacg ca tcgtcccgttgatgcgccgatgttctgacgacagct actggcttg gt tgccgggggggcgacgggcgtgtctcccctccgtgc gcgtggggg 165 SKPVRLSVAIPK +P+R++ A K RRPIRVNRANKK gi|298517517|gb 483 cccacgacgaaa ggctgtagcaaa gcgcgccaccgg // >gi|298517517|gb|GL349457.1|:subseq(285200,100000).pep RASSSLGTVVSAKIILDAETHGSAGYGFVEFETREGAQAAMPILQGRRVRALRIRINWAV QGSRRVADEDGLHSLFVGDLCKSVDDDMLHDAFAHFSSLTSARVMWDVRTGTSREFGFVS FRDASDAERALKTMGGTMLGRRPIRVNRANKK // >gi|298517517|gb|GL349457.1|:subseq(285200,100000).[63:518].sp CGTGCGAGCTCGTCGCTCGGCACGGTTGTCTCTGCCAAAATCATTCTGGATGCCGAGACG CACGGGTCTGCCGGGTATGGGTTTGTGGAGTTTGAGACGCGCGAAGGTGCACAGGCAGCA ATGCCGATTCTCCAGGGCCGGCGAGTGCGTGCGCTGCGGATCCGAATTAATTGGGCGGTG CAAGGCTCGCGGCGGGTGGCGGACGAGGACGGGCTGCACTCGCTGTTTGTAGGCGACTTG TGCAAGTCTGTGGACGACGACATGCTGCACGATGCGTTTGCGCATTTTTCGAGCCTCACG TCGGCGCGGGTGATGTGGGACGTGCGAACCGGGACGTCGCGCGAGTTTGGGTTTGTCTCT TTCCGCGACGCCAGTGACGCCGAGCGTGCGCTCAAGACCATGGGTGGGACGATGCTGGGG CGGCGCCCGATCCGGGTCAACCGAGCCAACAAGAAG // gi|298517517|gb|GL349457.1|:subseq(285200,100000) GeneWise match 63 518 78.77 + . gi|298517517|gb|GL349457.1|:subseq(285200,100000)-genewise-prediction-1 gi|298517517|gb|GL349457.1|:subseq(285200,100000) GeneWise cds 63 518 0.00 + 0 gi|298517517|gb|GL349457.1|:subseq(285200,100000)-genewise-prediction-1 // genewise output Score 52.61 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEF +++ G+L DE+++ + +GE + V+I+ +R TG G +VEF TIFCGNLSWNCDEDMLYETMKDIGE-ITDVRIVYDRDTGKHRGIGYVEF gi|298517517|g-77611 aattgacttatgggactgaaagagg aaggcagtgcgagaccgagtggt cttggatcgagaaattaactaatga tcatgttaagacgaaggtgatat cccccccggcccgcggcggggcctg ccccctgcctcccgccctcccgt 53 ADLATAEKCLHKINGKPLPGA--------TPAKRFKLNYATYGKQPDNS A++A+ +K + ++ G + G +K+F T D S ANVASVQKAIDEMTGAEVDGRNIRIDFANSNSKKFTGGPKTNAYNNDRS gi|298517517|g-77467 gaggtgcagaggaaggggggcaacagtgatataataggcaaagtaagct catcctaactaatcgcataggatgtatcacacaatcggcacacaaaagc cccgtgggcccggcccgtcccccccctccgcgggccccggccccccccg 94 PEYS-------LFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTG S FVG+++ D D+G + E+F V R +++ D TG SRPSGPVETDTVFVGNISFDADEGAIREMFGAV-GDVRDVRLITDRETG gi|298517517|g-77320 tcctgcggagagtggaattggggggacgatggg gggcggccaagcgag cgccgctacactttgatctacaagctgattgct gatgatgttcagacg gcggcgcgcccctccccgccccgtcccggcttc tcctcctcctccgtc 135 VSKGYGFVKFTDELEQKRALTECQGAVGLG KGYG+V+F++E ++A+ + GA +G YFKGYGYVQFSEESAAQQAVEQLAGADCMG gi|298517517|g-77176 ttagtgtgcttggtggccgggccggggtag atagagatatcaacccaactaatcgcagtg ccgcccccgcgggtcgggtgggcctcccgc // >gi|298517517|gb|GL349457.1|:subseq(285200,100000).pep TIFCGNLSWNCDEDMLYETMKDIGEITDVRIVYDRDTGKHRGIGYVEFANVASVQKAIDE MTGAEVDGRNIRIDFANSNSKKFTGGPKTNAYNNDRSSRPSGPVETDTVFVGNISFDADE GAIREMFGAVGDVRDVRLITDRETGYFKGYGYVQFSEESAAQQAVEQLAGADCMG // >gi|298517517|gb|GL349457.1|:subseq(285200,100000).[77611:77085].sp ACCATCTTCTGCGGCAACCTCTCGTGGAACTGCGACGAGGACATGCTGTACGAGACGATG AAGGACATCGGTGAGATCACCGACGTCCGCATTGTGTACGACCGTGACACCGGCAAGCAC CGCGGCATTGGCTACGTCGAGTTTGCCAACGTCGCGTCTGTGCAGAAGGCCATCGACGAG ATGACCGGCGCCGAGGTTGACGGCCGCAACATCCGCATCGACTTTGCCAACTCGAACTCG AAGAAGTTCACCGGCGGCCCGAAGACCAACGCCTACAACAACGACCGCTCGTCGCGCCCG TCGGGCCCGGTCGAGACCGACACCGTCTTTGTCGGCAACATCTCGTTCGACGCCGACGAG GGTGCCATCCGCGAGATGTTCGGTGCTGTCGGTGACGTCCGTGACGTCCGTCTCATCACT GACCGCGAGACTGGCTACTTCAAGGGCTACGGCTACGTCCAGTTCTCGGAGGAGTCTGCC GCGCAGCAGGCTGTGGAGCAGCTCGCCGGTGCCGACTGCATGGGC // gi|298517517|gb|GL349457.1|:subseq(285200,100000) GeneWise match 77611 77087 65.59 - . gi|298517517|gb|GL349457.1|:subseq(285200,100000)-genewise-prediction-1 gi|298517517|gb|GL349457.1|:subseq(285200,100000) GeneWise cds 77611 77087 0.00 - 0 gi|298517517|gb|GL349457.1|:subseq(285200,100000)-genewise-prediction-1 //