genewise output
Score 15.02 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

                 231 CQPNEFIMPDS                                       
                     CQ  E+ MP+S                                       
                     CQDTELHMPES                                       
gi|217404767|gb  483 tcgagtcacgt                                       
                     gaacatatcac                                       
                     tgccgacgtat                                       


//
>gi|217404767|gb|CM000622.1|:subseq(127000,2000).pep
CQDTELHMPES
//
>gi|217404767|gb|CM000622.1|:subseq(127000,2000).[483:515].sp
TGTCAGGACACCGAGTTACACATGCCTGAATCT
//
gi|217404767|gb|CM000622.1|:subseq(127000,2000)	GeneWise	match	483	515	15.02	+	.	gi|217404767|gb|CM000622.1|:subseq(127000,2000)-genewise-prediction-1
gi|217404767|gb|CM000622.1|:subseq(127000,2000)	GeneWise	cds	483	515	0.00	+	0	gi|217404767|gb|CM000622.1|:subseq(127000,2000)-genewise-prediction-1
//

genewise output
Score 69.82 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

                 123 VIPLRHGGLSLVQTTDFFYPLVEDPYMMGRIACANVLSDLYAMGITECD 
                     ++P + GG  +VQT D+F  +V+DP+ +G+I   + LSD++AMG T    
                     ILPNKAGG-AIVQTIDYFREIVKDPFTFGKIVAVHALSDIHAMGAT--P 
gi|217404767|gb-1631 accaaggg gagcaagttcgagagctatgaagggcgcagacgagga  c 
                     ttcaacgg cttactaatgattaactctgattctactgatactgcc  c 
                     atataatc cttattcctaacagtatccgatgacttactcctgggt  c 


                 172 NMLMLLSVSQSMSEEEREKVTPL-MVKGFRDAAEEGGTAVTGGQTVVNP 
                        M L+V+   ++EE  + T L ++ G  D  ++    + GG T     
                     QTAMTLAVAPFAADEEVTESTLLHLLSGVSDILQDENVQLVGGHTCEGL 
gi|217404767|gb-1493 cagaacgggctggggggagtactctcaggagatcggagccgggcatggt 
                     acctctctcctccaaatcaccttattggtgattaaaatattggacgagt 
                     aacgagttagtttcagaaagtagtattactttggtatggtttacttaag 


                 220 WIIIG-GVATVVCQPNEFIMPDSAVVGDVLVLTKPLGT            
                      +  G  V      P  ++      +GD +VLTKP+GT            
                     ELACGLSVQGYTDNPKLLLRKQGGAIGDKIVLTKPIGT            
gi|217404767|gb-1346 gtgtgtagcgtagacacctcacgggaggaagtaacaga            
                     atcggtgtagacaacatttgaaggctgaatttcactgc            
                     gaacagtcaatgttgagcatgattaaataccgcgaatc            


//
>gi|217404767|gb|CM000622.1|:subseq(127000,2000).pep
ILPNKAGGAIVQTIDYFREIVKDPFTFGKIVAVHALSDIHAMGATPQTAMTLAVAPFAAD
EEVTESTLLHLLSGVSDILQDENVQLVGGHTCEGLELACGLSVQGYTDNPKLLLRKQGGA
IGDKIVLTKPIGT
//
>gi|217404767|gb|CM000622.1|:subseq(127000,2000).[1631:1231].sp
ATACTTCCAAATAAAGCAGGTGGCGCCATTGTTCAAACTATTGACTACTTTCGAGAAATC
GTAAAGGATCCATTTACCTTCGGGAAAATTGTGGCAGTCCATGCTCTAAGCGATATCCAC
GCTATGGGGGCGACTCCCCAAACAGCCATGACACTGGCTGTTGCACCGTTTGCTGCTGAC
GAAGAGGTAACAGAATCGACTCTATTGCATTTACTTAGTGGAGTCAGTGATATTTTGCAG
GATGAAAATGTGCAGCTTGTTGGTGGACACACTTGTGAAGGATTGGAGTTAGCATGCGGA
TTGAGTGTCCAAGGATATACGGATAATCCGAAACTGCTCTTACGTAAGCAAGGTGGTGCA
ATAGGAGATAAAATCGTCTTGACCAAGCCAATAGGTACC
//
gi|217404767|gb|CM000622.1|:subseq(127000,2000)	GeneWise	match	1631	1233	70.82	-	.	gi|217404767|gb|CM000622.1|:subseq(127000,2000)-genewise-prediction-1
gi|217404767|gb|CM000622.1|:subseq(127000,2000)	GeneWise	cds	1631	1233	0.00	-	0	gi|217404767|gb|CM000622.1|:subseq(127000,2000)-genewise-prediction-1
//