genewise output
Score 15.76 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPS2_drosophila   46 NNDGYLIG                                          
                     NN GYL G                                          
                     NNSGYLTG                                          
gi|217404767|gb  350 aaagttag                                          
                     aaggatcg                                          
                     cttgcgca                                          


//
>gi|217404767|gb|CM000622.1|:subseq(127500,1500).pep
NNSGYLTG
//
>gi|217404767|gb|CM000622.1|:subseq(127500,1500).[350:373].sp
AACAATAGTGGGTACTTGACCGGA
//
gi|217404767|gb|CM000622.1|:subseq(127500,1500)	GeneWise	match	350	373	15.76	+	.	gi|217404767|gb|CM000622.1|:subseq(127500,1500)-genewise-prediction-1
gi|217404767|gb|CM000622.1|:subseq(127500,1500)	GeneWise	cds	350	373	0.00	+	0	gi|217404767|gb|CM000622.1|:subseq(127500,1500)-genewise-prediction-1
//

genewise output
Score 42.01 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPS2_drosophila   71 LIQTVDFFYPMVNDPELLGRIALANVLSDVYAVGVT              
                     ++QT+D+F  +V DP   G+I   + LSD++A+G T              
                     IVQTIDYFREIVKDPFTFGKIVAVHALSDIHAMGAT              
gi|217404767|gb-1104 agcaagttcgagagctatgaagggcgcagacgagga              
                     ttactaatgattaactctgattctactgatactgcc              
                     ttattcctaacagtatccgatgacttactcctgggt              


//
>gi|217404767|gb|CM000622.1|:subseq(127500,1500).pep
IVQTIDYFREIVKDPFTFGKIVAVHALSDIHAMGAT
//
>gi|217404767|gb|CM000622.1|:subseq(127500,1500).[1104:995].sp
ATTGTTCAAACTATTGACTACTTTCGAGAAATCGTAAAGGATCCATTTACCTTCGGGAAA
ATTGTGGCAGTCCATGCTCTAAGCGATATCCACGCTATGGGGGCGACT
//
gi|217404767|gb|CM000622.1|:subseq(127500,1500)	GeneWise	match	1104	997	42.01	-	.	gi|217404767|gb|CM000622.1|:subseq(127500,1500)-genewise-prediction-1
gi|217404767|gb|CM000622.1|:subseq(127500,1500)	GeneWise	cds	1104	997	0.00	-	0	gi|217404767|gb|CM000622.1|:subseq(127500,1500)-genewise-prediction-1
//