genewise output Score 419.57 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info eEFsec 6 VNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITLDLGFS +NVN+GVLGH+DSGKT+L +ALST STAA+DK QSR+RG+TLDLGFS LNVNLGVLGHVDSGKTSLVKALSTLLSTAALDKSKQSRQRGMTLDLGFS gi|217411035|gb 20 cagatggcgcggtgaatcgagctatctaggcgatactcccgaacgtgtt tatatgttgatacgaccttactccttcccctaacaacgaggtctatgtc gcccgtgggcccacggggcatggggcgttgctggaaatgttggctgatt eEFsec 55 CFSVPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTI CF + +P+ L++S P+ LQ+TLVDCPGHASLIRTI CFFLDMPSHLQASYPD------------KKNLQITLVDCPGHASLIRTI gi|217411035|gb 167 ttttgactctcgttcg aaaccaatggtcgcgacacaa gtttatccataccaca aaatatcttagcgacgttgct tctgcgcgtaatccgt gatgactgctttccctgtaca eEFsec 104 IGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKIDLLP IGGAQIID+++LV+D KG Q Q+ ECLV+ ++ LVV LNK D P IGGAQIIDMVLLVVDAVKGWQAQTTECLVLAELTSPYLVVALNKADQFP gi|217411035|gb 278 agggcaagagtcgggggagtcgcaagtcgtggtatctcgggcaaggctc tggcattattttttactaggacaccagtttcatcccatttctaacaatc ctccacttgcaaatcggaggggaaggcgcgcagatgtttggacagtgtt eEFsec 153 EGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVAAKPGGPEAPETEAPQ- +R +++ K++ L+ T+F API+ VAA GG + PPERDQLLEQAAAKIRDRLKATRFANAPIVGVAACVGGEKVAAASEDMS gi|217411035|gb 425 ccgcgcccgcgggaacgctagactgagcagggggtggggaggggaggat ccagaattaacccatgagtaccgtcaccttgtccgtggaatcccgaatc ggaacgacagcgcatattgagtgcgttttttatcctagagacaacacga eEFsec 201 ---------GIPELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTV + L++ L ++ P R P G F +SVDHCFSI+G+GTV KLEVRNETYNMETLVQTLQDKLPPPKRTPEGSFYFSVDHCFSIRGRGTV gi|217411035|gb 572 acggcagataagatgcaccgaccccacacggttttaggctttacgcgag atatgaacaatacttactaaatcccagccagctatgtaagtctggggct acatgtaactggtgaacgacaaggggggcgcgccccgcctcttcaaatg eEFsec 241 MTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGIC +TGT+L+G+ S+ D +E+P L + +K+KS+QMF + +QGDR G+C LTGTVLNGAASVNDVLEFPTLGLDRKIKSIQMFKRQVQRIQQGDRAGVC gi|217411035|gb 719 cagagcagggtgaggcgtcacgtgcaaaaacataccgccaccggcgggt tcgcttagccctaattatcctgtagatagtattagatagtaagagcgtg atacttttatgattgcgtaggtgttgcacaagcaagaagtaagttattt eEFsec 290 VTQFDPKLLERGLVCAPESLHTVHAALISVEKIPYFRGPLQTKAKFHIT V+ +D KLLERG+ P ++ + A+ V K+PY+ G L + +KFHI+ VSNLDAKLLERGIAATPGAVQLLKGAIALVRKVPYYVGTLHSGSKFHIS gi|217411035|gb 866 gaatggactgcgaggacgggctcaggagcgcagcttggatcagaatcat tgatacattaggtccccgctattagctcttgatcaatgctagggatatc tccacgggagcttgtgagggggcatgtgatcgagttcttgccttgttct eEFsec 339 VGHETVMGRLMFFSPAPD-NFDQEPILDSFNFSQEYLFQEQYLSK---- VGH T+M + F+ +Q P S + ++Y+ VGHTTIMATVTFWGAVELLGKEQNPADLSVVNPVDTKPSKRYVGSSSLG gi|217411035|gb 1013 ggcaaaagagattggggtcgagcacggtaggacggaactactggttttg tgaccttcctctggctattgaaaaccatgttactacaccagatgccctg tgtctcgaggctgttaagtaaagctacatcctacttggggattagcgat eEFsec 383 ---DLT--PAVTDNDEAD----KKAGQATEGHCPRQQWALVEFEKPVTC D+ P +T + E + ++ +G WAL++F+ PV C GDADMAGLPRMTFSFEEEFIHQDDLLESLDGQESLLHWALLDFQIPVHC gi|217411035|gb 1160 ggggaggcccaatatgggtaccggccgtcggcgaccctgccgtcacgct gacatcgtcgtctgtaaattaaaattactagaagttagcttatatctag ccttgatttaggtctgaatatattctaagtgggtattggtttcaccatt eEFsec 423 PRLCLVIGSRLDA-DIHT---NTCRLAFHGILLHGLEDRNYADSFLPRL P LVIGSRLD D T CRLAF G L+ ++ + +L PMDSLVIGSRLDTVDNSTGSASACRLAFSGRLMQSVDP----GKDISKL gi|217411035|gb 1307 cagatgagtctgaggatagtgagtccgttgccacaggc gagatat ctagtttgcgtactaaccgccgcggtctcggttagtac gaatcat agtcagcagcgcggttcggccttcgagtcttcgaccta gacttag eEFsec 468 KVYKLKHKHGLVERAMDD-----------YSVIGRSLFKKETNIQLFVG ++Y K + G + R D Y V+G LFKKETN++ F G RLYTPKERRGTISRLGDPHKRTDDDKLVRYEVFGSDLFKKETNMKAFFG gi|217411035|gb 1442 cctacagccgaatccggccacagggacgctggtgtgctaagaaaagttg gtaccaagggctcgtgacaagcaaaattgaattgcattaaacatacttg aattcaacacaaatctcctgatttcatttcactattgtgaaccgatttt eEFsec 506 LKVHLSTGELGIIDSAFGQSGKFKIHIPGG +KV E+G I S+FG SGK+++ +P G MKVQTERNEIGEIKSSFGTSGKYRVFFPAG gi|217411035|gb 1589 aagcagcagaggaatttgatgatcgttcgg tatacagaatgatacctgccgaagtttccg gagggagtgttgcacgcagccgcaccttct // >gi|217411035|gb|CM000605.1|:subseq(950700,3000).pep LNVNLGVLGHVDSGKTSLVKALSTLLSTAALDKSKQSRQRGMTLDLGFSCFFLDMPSHLQ ASYPDKKNLQITLVDCPGHASLIRTIIGGAQIIDMVLLVVDAVKGWQAQTTECLVLAELT SPYLVVALNKADQFPPPERDQLLEQAAAKIRDRLKATRFANAPIVGVAACVGGEKVAAAS EDMSKLEVRNETYNMETLVQTLQDKLPPPKRTPEGSFYFSVDHCFSIRGRGTVLTGTVLN GAASVNDVLEFPTLGLDRKIKSIQMFKRQVQRIQQGDRAGVCVSNLDAKLLERGIAATPG AVQLLKGAIALVRKVPYYVGTLHSGSKFHISVGHTTIMATVTFWGAVELLGKEQNPADLS VVNPVDTKPSKRYVGSSSLGGDADMAGLPRMTFSFEEEFIHQDDLLESLDGQESLLHWAL LDFQIPVHCPMDSLVIGSRLDTVDNSTGSASACRLAFSGRLMQSVDPGKDISKLRLYTPK ERRGTISRLGDPHKRTDDDKLVRYEVFGSDLFKKETNMKAFFGMKVQTERNEIGEIKSSF GTSGKYRVFFPAG // >gi|217411035|gb|CM000605.1|:subseq(950700,3000).[20:1678].sp CTGAACGTCAACTTGGGTGTGCTGGGGCACGTCGACTCAGGCAAGACGTCGCTGGTCAAA GCTCTGTCGACGTTGCTCTCGACTGCTGCGCTCGATAAGTCGAAACAATCACGTCAGCGT GGTATGACGCTCGATTTGGGATTTTCTTGTTTCTTTTTGGACATGCCCTCGCATTTACAA GCTTCCTACCCGGATAAGAAAAATCTGCAAATCACTTTGGTCGATTGTCCTGGCCACGCC AGTCTGATTCGAACCATAATCGGTGGCGCCCAAATCATTGATATGGTCTTACTAGTAGTT GACGCGGTGAAAGGGTGGCAGGCGCAAACAACGGAGTGCCTGGTCTTGGCCGAATTGACA TCTCCGTATCTTGTTGTGGCGCTAAACAAAGCGGATCAGTTTCCTCCGCCGGAACGAGAC CAGCTACTCGAACAGGCCGCGGCCAAAATTCGAGATCGTTTGAAAGCGACTCGGTTCGCG AATGCTCCTATTGTTGGTGTAGCTGCCTGCGTTGGAGGGGAAAAGGTAGCCGCAGCAAGC GAAGACATGTCAAAACTCGAAGTTCGGAATGAAACATACAATATGGAGACTTTGGTACAA ACCCTGCAAGACAAACTACCGCCGCCGAAGCGGACGCCCGAGGGCTCGTTCTACTTCAGC GTGGACCACTGTTTCTCTATTCGCGGACGAGGAACTGTGCTAACTGGAACCGTTCTTAAT GGTGCAGCTTCGGTAAATGATGTGCTCGAGTTTCCAACGCTGGGTTTGGATCGTAAGATC AAAAGCATACAAATGTTCAAACGACAGGTACAACGGATTCAACAAGGGGATCGTGCAGGT GTTTGTGTTAGCAACTTAGACGCGAAGCTGTTAGAGCGCGGTATTGCGGCTACGCCAGGG GCGGTGCAGTTGCTCAAAGGTGCGATTGCGCTAGTTCGCAAGGTACCGTATTATGTCGGT ACTTTGCACAGCGGTAGTAAGTTTCATATCTCTGTTGGGCATACCACTATCATGGCAACG GTGACCTTTTGGGGTGCTGTAGAATTGCTTGGAAAAGAACAGAACCCTGCAGACTTAAGT GTCGTCAATCCAGTCGATACTAAGCCGTCGAAGCGATATGTTGGATCGTCCTCGTTAGGT GGCGACGCTGATATGGCAGGTCTTCCTCGAATGACGTTTAGCTTTGAGGAAGAATTTATA CATCAAGATGATCTCCTTGAATCACTGGATGGGCAGGAGAGTCTACTTCATTGGGCGCTT CTTGATTTCCAAATCCCCGTACATTGTCCAATGGATAGCTTAGTGATCGGATCGCGCTTG GACACGGTGGATAATTCCACGGGGTCCGCCAGTGCTTGCCGGCTAGCGTTTTCCGGTCGT CTCATGCAAAGCGTCGATCCAGGGAAAGACATTTCTAAATTGCGACTATATACTCCCAAA GAACGCCGAGGCACAATATCACGTCTCGGTGACCCCCATAAGCGAACTGATGATGACAAA CTTGTTCGTTACGAAGTCTTTGGATCTGATCTGTTTAAGAAAGAAACCAACATGAAAGCT TTTTTTGGTATGAAAGTGCAGACGGAACGGAATGAGATTGGTGAGATCAAATCCTCGTTC GGAACGTCCGGCAAGTACCGAGTCTTCTTTCCTGCCGGT // gi|217411035|gb|CM000605.1|:subseq(950700,3000) GeneWise match 20 1678 464.50 + . gi|217411035|gb|CM000605.1|:subseq(950700,3000)-genewise-prediction-1 gi|217411035|gb|CM000605.1|:subseq(950700,3000) GeneWise cds 20 1678 0.00 + 0 gi|217411035|gb|CM000605.1|:subseq(950700,3000)-genewise-prediction-1 // genewise output Score 14.03 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info eEFsec 492 SLFKKETNIQLFVGLKV +LF+ ET L+V L + NLFEIETYTSLYVSLSL gi|217411035|gb-2954 actgagataactgtctc attatacacgtatctct ctcatactcttttttga // >gi|217411035|gb|CM000605.1|:subseq(950700,3000).pep NLFEIETYTSLYVSLSL // >gi|217411035|gb|CM000605.1|:subseq(950700,3000).[2954:2902].sp AACCTTTTCGAAATTGAAACCTATACCAGTCTTTATGTTTCTCTTTCGCTA // gi|217411035|gb|CM000605.1|:subseq(950700,3000) GeneWise match 2954 2904 14.03 - . gi|217411035|gb|CM000605.1|:subseq(950700,3000)-genewise-prediction-1 gi|217411035|gb|CM000605.1|:subseq(950700,3000) GeneWise cds 2954 2904 0.00 - 0 gi|217411035|gb|CM000605.1|:subseq(950700,3000)-genewise-prediction-1 //