genewise output
Score 21.55 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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Aureococcus       57 CNLARFPQVQAFVHKDMARQFPQVALKDADFKTKEVLSVEKWDTDTLID 
                     CN A+FP +  F+   +   F  + LK     T  ++S  +    TL+  
                     CNSAQFPVLIYFIANVICNVFSVLVLKHGTASTGFIVSTLRLPVTTLVF 
gi|126212623|gb-8939 tatgctcgtattagagatagtagtgtacgagtagtagtacatcgaatgt 
                     gaccatctttattcattgattgttttaagccccgtttcctgtctccttt 
                     ttaaattcaatttatatcttctaaaggtgttaaattcataaaatttgat 


Aureococcus      106 F                                                 
                     F                                                 
                     F                                                 
gi|126212623|gb-8792 t                                                 
                     t                                                 
                     t                                                 


//
>gi|126212623|gb|CM000434.1|:subseq(1155000,100000).pep
CNSAQFPVLIYFIANVICNVFSVLVLKHGTASTGFIVSTLRLPVTTLVFF
//
>gi|126212623|gb|CM000434.1|:subseq(1155000,100000).[8939:8788].sp
TGTAATTCAGCACAATTTCCTGTCTTAATATATTTTATTGCAAATGTAATTTGCAATGTT
TTCAGTGTATTAGTATTGAAGCATGGGACTGCTTCAACAGGATTTATTGTCTCAACTCTA
AGATTACCAGTTACTACTTTGGTATTTTTT
//
gi|126212623|gb|CM000434.1|:subseq(1155000,100000)	GeneWise	match	8939	8790	21.55	-	.	gi|126212623|gb|CM000434.1|:subseq(1155000,100000)-genewise-prediction-1
gi|126212623|gb|CM000434.1|:subseq(1155000,100000)	GeneWise	cds	8939	8790	0.00	-	0	gi|126212623|gb|CM000434.1|:subseq(1155000,100000)-genewise-prediction-1
//