TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aureococcus anophagefferens
         (108 letters)

Database: A.taiwanensis/genome.fa 
           5379 sequences; 6,149,411 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABJQ01001498.1| Ascogregarina taiwanensis Contig1711, whole g...    28   0.22 
gb|ABJQ01003320.1| Ascogregarina taiwanensis Contig3657, whole g...    27   0.63 
gb|ABJQ01004870.1| Ascogregarina taiwanensis CLXbaP71-B07.g1.ab1...    26   0.82 
gb|ABJQ01002698.1| Ascogregarina taiwanensis Contig3011, whole g...    25   1.8  
gb|ABJQ01003041.1| Ascogregarina taiwanensis Contig3374, whole g...    25   2.4  
gb|ABJQ01004540.1| Ascogregarina taiwanensis CLRanP81-E04.g1.ab1...    23   7.0  
gb|ABJQ01005194.1| Ascogregarina taiwanensis CLRanP113-G01.b1.ab...    23   9.1  
gb|ABJQ01003300.1| Ascogregarina taiwanensis Contig3635, whole g...    23   9.1  

>gb|ABJQ01001498.1| Ascogregarina taiwanensis Contig1711, whole genome shotgun sequence
          Length = 1598

 Score = 28.1 bits (61), Expect = 0.22
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 17  CERLSDYHLETLLTDCLQCCIKEEEFKHEKYPTAILE 53
           C RL  YH+ ++L D LQ  I++   + E    A+ E
Sbjct: 531 CRRLCAYHIRSILIDKLQNAIRQYRAEREVIEEALKE 641


>gb|ABJQ01003320.1| Ascogregarina taiwanensis Contig3657, whole genome shotgun sequence
          Length = 2479

 Score = 26.6 bits (57), Expect = 0.63
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +3

Query: 78  PQVALKDADFKTKEVLSVEKWDTDTLIDFF 107
           P   L +A   TKEVLS   W      DFF
Sbjct: 234 PPKVLNNAQSSTKEVLSGSGWSMGLSFDFF 323


>gb|ABJQ01004870.1| Ascogregarina taiwanensis CLXbaP71-B07.g1.ab1, whole genome shotgun
           sequence
          Length = 778

 Score = 26.2 bits (56), Expect = 0.82
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 33  LQCCIKEEEFKHEKYPTAI 51
           LQ C+K+ E+K +K PT I
Sbjct: 627 LQHCLKQPEYKEDKTPTRI 683


>gb|ABJQ01002698.1| Ascogregarina taiwanensis Contig3011, whole genome shotgun sequence
          Length = 2008

 Score = 25.0 bits (53), Expect = 1.8
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 21  SDYHLETLLTDCLQCCIKEEEFKHEKYPTAILE 53
           SDY  +TL T+  Q    E +FK+    T  LE
Sbjct: 981 SDYETQTLTTNIEQMNWGETQFKYRNVNTTCLE 883


>gb|ABJQ01003041.1| Ascogregarina taiwanensis Contig3374, whole genome shotgun sequence
          Length = 3512

 Score = 24.6 bits (52), Expect = 2.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 58  NLARFPQVQAFVHKDMARQFPQVALKDADF 87
           +L  FPQV  F+  D  RQ    ALK A +
Sbjct: 254 SLHLFPQVSCFLRADQKRQAELDALKFAKY 343


>gb|ABJQ01004540.1| Ascogregarina taiwanensis CLRanP81-E04.g1.ab1, whole genome shotgun
           sequence
          Length = 836

 Score = 23.1 bits (48), Expect = 7.0
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -3

Query: 17  CERLSDYHLETLLTDCLQCCIKEEEFKHEKYPTAILEVCE 56
           CERL    ++ LL  C+QC      F  ++Y     E+ +
Sbjct: 249 CERLRRQLMQ*LLGCCVQCA*GNGSF*RKRYVVRRQEIAK 130


>gb|ABJQ01005194.1| Ascogregarina taiwanensis CLRanP113-G01.b1.ab1, whole genome
           shotgun sequence
          Length = 882

 Score = 22.7 bits (47), Expect = 9.1
 Identities = 6/24 (25%), Positives = 15/24 (62%)
 Frame = +2

Query: 36  CIKEEEFKHEKYPTAILEVCECNL 59
           C++ E+++H +Y +  + +  C L
Sbjct: 725 CVQHEDYQHLRYVSCPIRLALCRL 796


>gb|ABJQ01003300.1| Ascogregarina taiwanensis Contig3635, whole genome shotgun sequence
          Length = 3157

 Score = 22.7 bits (47), Expect = 9.1
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -2

Query: 23   YHLETLLTDCLQCCIKEEEFKHEKYPTAILEVCECNLARFP 63
            YHL  + +   QC   E + +    P  ILE     + R P
Sbjct: 2238 YHLSIMSSARRQCLRTENQAERSSLPFLILETANHQVHRPP 2116


  Database: A.taiwanensis/genome.fa
    Posted date:  Feb 9, 2011  9:02 AM
  Number of letters in database: 6,149,411
  Number of sequences in database:  5379
  
Lambda     K      H
   0.324    0.137    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 925,725
Number of Sequences: 5379
Number of extensions: 13791
Number of successful extensions: 63
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of query: 108
length of database: 2,049,803
effective HSP length: 74
effective length of query: 34
effective length of database: 1,651,757
effective search space: 56159738
effective search space used: 56159738
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 47 (22.7 bits)