T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=61
*
 BAD AVG GOOD
*
gpx1mexicana   :  69
gpx8mexicana   :  69
hit1           :  54
hit2           :  54
hit3           :  69
hit4           :  54
hit5           :  61
cons           :  61

gpx1mexicana   ------------------------------------------------
gpx8mexicana   ------------------------------------------------
hit1           TVYDFQVNAADGKPYDLSQHKGHPLLIYNVASRCGYTKGGYETAATLY
hit2           KK----------------------------------------------
hit3           ------------------------------------------------
hit4           ------------------------------------------------
hit5           SS----------------------------------------------

cons                                                           


gpx1mexicana   ------------------------------------------------
gpx8mexicana   ------------------------------------------------
hit1           NKYKGQGFTVLAFPCNQFAGQEPGTAVEVKEYACTRFKADFPIMEKID
hit2           ---------S--------------------------------------
hit3           ------------------------------------------------
hit4           ---------VLAFPCNQFAGQEPGTALEVKEFACTRFKADFPIMAKID
hit5           ---------------------------------VT-CGEMF-------

cons                                                           


gpx1mexicana   ------------------------------------------------
gpx8mexicana   ------------------------------------------------
hit1           VNGDKAHPLYEFMKSLKPGILGTKAIKWNFTSFLIDRHGVPVERFSPG
hit2           ------------------------------------------------
hit3           ------------------------------------------------
hit4           VNGSKAHPLYEFMKATIPGLFGTKAIKWNFTSFLIDRHGVPVERFSPG
hit5           -------RFGQLLRAA--------------------------------

cons                                                           


gpx1mexicana   -----------SSIYDFKVNGGDHKPYDLGQHKGHPVLIYNVASKCGF
gpx8mexicana   -----------------------GKTVVLQKYSGYTTLIVNVASRCSL
hit1           ASVEEIEKKL-KSIYEFQVNAADGKPYDLSQHKGHPLLIYNVASRCGY
hit2           -----------STVFAYSALM-GGKSVALSNYTGRVTVVVNTASLCSF
hit3           -----------------------GKSVALSNYTGRVTVVVNTASLCSF
hit4           ASVED--IEKKLSIYDFQILDADHQLYDLSQHKGHPLLIYNVASRCGY
hit5           --------EM-KSIYEFQVNAADGKPYDLSQHKGHPLLIYNVASRCGY

cons                                   :   * ::.*   :: *.** *. 


gpx1mexicana   TKGGYETATALYNKYKHQGFTVLAFPCNQFASQEPGTEESVKEFACTR
gpx8mexicana   ASANIEMLNKVQQAYDSRRFTVLAFPCAQFANQEPLNNTEIAQWCED-
hit1           TKGGYETATTLYNKYKGQGFTVLAFPCNQFAGQEPGTALEVKEYACTR
hit2           ANSSLQQLTHVQETYGPRGVTILAFPCAQFANQEPKSNEEITVWAQT-
hit3           ANSSLQQLTHVQETYGPRGFTILAFPCAQFANQEPKSNEEIAVWAQT-
hit4           TKGGYETATTLYNKYKGQGFTVLAFPCNQFAGQEPGTALEVKEFACTQ
hit5           TKGGYETATTLYNKYKGQGFTVLAFPCNQFAGQEPGTALEVKEFACTR

cons           :... :  . : : *  : .*:***** ***.*** .  .:  :.   


gpx1mexicana   FKAEFPIMEKVCVNGEHEHPLYHYLKNTCKGV----------------
gpx8mexicana   LGLLFPVFDRVNVKGSSADPLFQMLRAQQGAP------LWNYTKYLCD
hit1           FKADFPIMEKIDVNGGKAHPLYEFMKATIPGLFGTKAIKWNFTSFLID
hit2           CGVNFPLFDKVKVKGPDAHPLFQMLQASLSST------VFAYSALMGG
hit3           CGLNFPLFDKVKVKGPDAHPLFQMLQASLGPI------RWNYTKFICD
hit4           FKADFPIMAKIDVNGDKAHPLYSYLKRCLTG-----------------
hit5           FKADF-------------------------------------------

cons               *                                           


gpx1mexicana   ------------------------------------------------
gpx8mexicana   RSG---------------------------------------------
hit1           RHGVPVERFSPGASVEDIEKKLSIYDFQILDADHQLYDLSQHKGHPLL
hit2           KSV----------------------------------ALSNYTGRVTV
hit3           REG---------------------------------------------
hit4           ------------------------------------------------
hit5           ------------------------------------------------

cons                                                           


gpx1mexicana   ------------------------------------------------
gpx8mexicana   ----VPRRKLE-------------------------------------
hit1           IYNVASRCGYTKGGYETATTLYNKYKGQGFTVLAFPCNQFAGQEPGTA
hit2           VVNTASLCSFANSSLQQLTHVQETYGPRGVTILAFPCAQFANQEPKSN
hit3           ----IPLVKLD-------------------------------------
hit4           ------------------------------------------------
hit5           ------------------------------------------------

cons                                                           


gpx1mexicana   ------------------------------------------LGTTLV
gpx8mexicana   ------------------------------------------------
hit1           LEVKEFACTQFKADFPIMAKIDVNGDKAHPLYSYLKRCLTGSAGVQAI
hit2           EEITVWAQTC-GVNFPLFDKVKVKGPD---------------------
hit3           ------------------------------------------------
hit4           -----------------------------------------SAGVQAI
hit5           ------------------------------------------------

cons                                                           


gpx1mexicana   KWNFTAFLVDKDGHAVCRFAPGATMSE----I--EK
gpx8mexicana   --------------------PSCSMDALRQSIECVL
hit1           KWNFTSFLIDRHGVPVARFSPGASVEE----IEMQL
hit2           --------------------AHPLFQM----LQASL
hit3           --------------------SSSFLEE----LRRSI
hit4           KWNFTSFLIDRHGVPVARFSPGASVEE----IEMQL
hit5           ----------------------------------HI

cons