T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:1 sec.
SCORE=76
*
BAD AVG GOOD
*
GPX1 : 81
GPX2 : 82
GPX3 : 79
GPX4 : 78
GPX5 : 79
GPX6 : 79
GPX7 : 80
GPX8 : 77
hit1 : 63
hit2 : 64
hit3 : 78
hit4 : 70
hit5 : 73
cons : 76
GPX1 MCAARLA-----------------------------------------------
GPX2 MA----------------------------------------------------
GPX3 MARLLQASC---------------------------------------------
GPX4 MSLGRLCR----------------------------------------------
GPX5 MTTQLRVVH---------------------------------------------
GPX6 MFQQFQASC---------------------------------------------
GPX7 MVAATV------------------------------------------------
GPX8 MEPLAAY-P---------------------------------------------
hit1 TVYDFQVNAADGKPYDLSQHKGHPLLIYNVASRCGYTKGGYETAATLYNKYKGQ
hit2 ------------------------------------------------------
hit3 ------------------------------------------------------
hit4 VL----------------------------------------------------
hit5 SSVT--------------------------------------------------
cons
GPX1 ------------------------------------------A-----------
GPX2 ------------------------------------------------------
GPX3 ---LLSLLLAGFVSQSRG-----------------QEKSKMDC-----------
GPX4 ---LLKPAL-----------------LCGAL---A-------------------
GPX5 ---LLPLLLACFVQTSPK-----------------QEKMKMDC-----------
GPX6 ---LVLFFLVGFAQQTLK-----------------PQNRKVDC-----------
GPX7 ---------------------------A-AA---W--------------LLLWA
GPX8 ---L---KCSGPRAKVF--AVLLSIVLCTVT---L--------------FLLQL
hit1 GFTVLAFPCNQFAGQEPGTAVEVKEYACTRFKADFPIMEKIDVNGDKAHPLYEF
hit2 ------------------------------------------------------
hit3 ------------------------------------------------------
hit4 -----AFPCNQFAGQEPGTALEVKEFACTRFKADFPIMAKIDVNGSKAHPLYEF
hit5 ---------------------------CGEM---F--------------RFGQL
cons
GPX1 ---------------------------------------------AAAAAQSVY
GPX2 -----------------------------------------------FIAKSFY
GPX3 ---------------------------------------------HGGISGTIY
GPX4 A----PGLAG----------------------------TMCASRDDWRCARSMH
GPX5 ---------------------------------------------HKDEKGTIY
GPX6 ---------------------------------------------NKGVTGTIY
GPX7 A------------------------------------------A-CAQQEQDFY
GPX8 K------------------------------------------F-LKPKINSFY
hit1 MKSLKPGILGTKAIKWNFTSFLIDRHGVPVERFSPGASV---EE-IEKKLKSIY
hit2 -----------------------------------------------KKSSTVF
hit3 ------------------------------------------------------
hit4 MKATIPGLFGTKAIKWNFTSFLIDRHGVPVERFSPG--A---SVEDIEKKLSIY
hit5 L--------------------------------------------RAAEMKSIY
cons
GPX1 AFSARPLAGGEPVSLGSLRGKVLLIENVASLXGTTVRDYTQMNELQRRLGPRGL
GPX2 DLSAISLD-GEKVDFNTFRGRAVLIENVASLXGTTTRDFTQLNELQCRF-PRRL
GPX3 EYGALTIDGEEYIPFKQYAGKYVLFVNVASYXGLT-GQYIELNALQEELAPFGL
GPX4 EFSAKDIDG-HMVNLDKYRGFVCIVTNVASQXGKTEVNYTQLVDLHARYAECGL
GPX5 DYEAIALNKNEYVSFKQYVGKHILFVNVATYXGLT-AQYPELNALQEELKPYGL
GPX6 EYGALTLNGEEYIQFKQFAGKHVLFVNVAAYXGLA-AQYPELNALQEELKNFGV
GPX7 DFKAVNIRG-KLVSLEKYRGSVSLVVNVASEXGFTDQHYRALQQLQRDLGPHHF
GPX8 AFEVKDAKG-RTVSLEKYKGKVSLVVNVASDXQLTDRNYLGLKELHKEFGPSHF
hit1 EFQVNAADG-KPYDLSQHKGHPLLIYNVASRCGYTKGGYETATTLYNKYKGQGF
hit2 AYSAL-MGG-KSVALSNYTGRVTVVVNTASLCSFANSSLQQLTHVQETYGPRGV
hit3 --------G-KSVALSNYTGRVTVVVNTASLCSFANSSLQQLTHVQETYGPRGF
hit4 DFQILDADH-QLYDLSQHKGHPLLIYNVASRCGYTKGGYETATTLYNKYKGQGF
hit5 EFQVNAADG-KPYDLSQHKGHPLLIYNVASRCGYTKGGYETATTLYNKYKGQGF
cons . : * :. *.*: : : .
GPX1 VVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPL
GPX2 VVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPV
GPX3 VILGFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKF
GPX4 RILAFPCNQFGKQEPGSNEEIKEF---A---AGYNVKFDMFSKICVNGDDAHPL
GPX5 VVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKV
GPX6 IVLAFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKV
GPX7 NVLAFPCNQFGQQEPDSNKEIESF---AR--RTYSVSFPMFSKIAVTGTGAHPA
GPX8 SVLAFPCNQFGESEPRPSKEVESF---AR--KNYGVTFPIFHKIKILGSEGEPA
hit1 TVLAFPCNQFAGQEPGTALEVKEY---AC--TRFKADFPIMEKIDVNGGKAHPL
hit2 TILAFPCAQFANQEPKSNEEITVW---AQ---TCGVNFPLFDKVKVKGPDAHPL
hit3 TILAFPCAQFANQEPKSNEEIAVW---AQ---TCGLNFPLFDKVKVKGPDAHPL
hit4 TVLAFPCNQFAGQEPGTALEVKEF---AC--TQFKADFPIMAKIDVNGDKAHPL
hit5 TVLAFPCNQFAGQEPGTALEVKEF---AC--TRFKADF----------------
cons :*.*** **. .* *: . *
GPX1 FAFLREALPAPSDDATA-------------------------------------
GPX2 FAYLKDKLPYPYDDPFS-------------------------------------
GPX3 YTFLKNSCPPTSE-----------------------------------------
GPX4 WKWMKIQPK-GKG-----------------------------------------
GPX5 FSFLKHSCPHPSE-----------------------------------------
GPX6 FTFLKNSCPPTSD-----------------------------------------
GPX7 FKYLAQTSG---------------------------------------------
GPX8 FRFLVDSSK---------------------------------------------
hit1 YEFMKATIPGLFG-TKAIKWNFTSFLIDRHGVPVERFSPGASVEDIEKKLSIYD
hit2 FQMLQASLSST-------VFAYSALM----------------------------
hit3 FQMLQASLGPI-------RWNYTKF-----------------------------
hit4 YSYLKRCLT---------------------------------------------
hit5 ------------------------------------------------------
cons
GPX1 ------------------------------------------------------
GPX2 ------------------------------------------------------
GPX3 ------------------------------------------------------
GPX4 ------------------------------------------------------
GPX5 ------------------------------------------------------
GPX6 ------------------------------------------------------
GPX7 ------------------------------------------------------
GPX8 ------------------------------------------------------
hit1 FQILDADHQLYDLSQHKGHPLLIYNVASRCGYTKGGYETATTLYNKYKGQGFTV
hit2 ------GGKSVALSNYTGRVTVVVNTASLCSFANSSLQQLTHVQETYGPRGVTI
hit3 ---------------------------------------------ICDREGIPL
hit4 ------------------------------------------------------
hit5 ------------------------------------------------------
cons
GPX1 ----------------------------------------------LMTDPKLI
GPX2 ----------------------------------------------LMTDPKLI
GPX3 ----------------------------------------------LLGTSDRL
GPX4 ------------------------------------------------------
GPX5 ----------------------------------------------ILGTFKSI
GPX6 ----------------------------------------------LLGSSSQL
GPX7 ------------------------------------------------------
GPX8 ------------------------------------------------------
hit1 LAFPCNQFAGQEPGTALEVKEFACTQFKADFPIMAKIDVNGDKAHPLYSYLKRC
hit2 LAFPCAQFANQEPKSNEEITVWAQT-CGVNFPLFDKVKVK--------------
hit3 V-----------------------------------------------------
hit4 ------------------------------------------------------
hit5 ------------------------------------------------------
cons
GPX1 TWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALLSQG----P
GPX2 IWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKRLLK-------
GPX3 FWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRRQAALGV
GPX4 ----ILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLP-----------
GPX5 SWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQ-----F
GPX6 FWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQ-----F
GPX7 -------KEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALVRKLILLKR
GPX8 -------KEPRWNFWKYLVNPEGQVVKFWKPEEPIEVIRPDIAALVRQVIIKKK
hit1 LTGSAGVQAIKWNFTSFLIDRHGVPVARFSPGASVEEIEM--------------
hit2 ---------------------------GPDAHPLFQML---------------Q
hit3 ---------------------------KLDSSSFLEEL---------------R
hit4 --GSAGVQAIKWNFTSFLIDRHGVPVARFSPGASVEEIEM--------------
hit5 ------------------------------------------------------
cons
GPX1 SCA
GPX2 VAI
GPX3 KRK
GPX4 HYF
GPX5 KTK
GPX6 NTH
GPX7 EDL
GPX8 EDL
hit1 -QL
hit2 ASL
hit3 RSI
hit4 -QL
hit5 -HI
cons