TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000011_1.0 # Protein # Glutathione peroxidase 8 (GPx8) # Homo sapiens # Complete (209 letters) Database: bd_tcruzi 32,746 sequences; 89,612,356 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|70877619|gb|AAHK01000570.1| Trypanosoma cruzi strain CL Brene... 92 6e-19 gi|70878965|gb|AAHK01000457.1| Trypanosoma cruzi strain CL Brene... 89 7e-18 gi|70871017|gb|AAHK01001472.1| Trypanosoma cruzi strain CL Brene... 87 2e-17 gi|70879395|gb|AAHK01000424.1| Trypanosoma cruzi strain CL Brene... 86 3e-17 gi|70838800|gb|AAHK01029133.1| Trypanosoma cruzi strain CL Brene... 64 1e-10 >gi|70877619|gb|AAHK01000570.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053503899, whole genome shotgun sequence Length = 29983 Score = 92.0 bits (227), Expect = 6e-19 Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 5/182 (2%) Frame = +2 Query: 22 LLSIVLCTVTLFLLQLKFLKPKINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASD*QL 81 L S V C +F ++ S Y F+V A G+ L ++KG L+ NVAS Sbjct: 23273 LRSSVTCGE*MFRFGQLLRAAEMKSIYEFQVNAADGKPYDLSQHKGHPLLIYNVASRCGY 23452 Query: 82 TDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIK 141 T Y L+ ++ F+VLAFPCNQF EP + EV+ +A + FPI KI Sbjct: 23453 TKGGYETATTLYNKYKGQGFTVLAFPCNQFAGQEPGTALEVKEYACTRFKADFPIMEKID 23632 Query: 142 ILGSEGEPAFRFLVDS-----SKKEPRWNFWKYLVNPEGQVVKFWKPEEPIEVIRPDIAA 196 + G + P + F+ + K +WNF +L++ G V+ + P +E I + Sbjct: 23633 VNGGKAHPLYEFMKATIPGLFGTKAIKWNFTSFLIDRHGVPVERFSPGASVEDIEKKLLP 23812 Query: 197 LV 198 L+ Sbjct: 23813 LL 23818 Score = 88.2 bits (217), Expect = 9e-18 Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 5/162 (3%) Frame = +3 Query: 44 INSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASD*QLTDRNYLGLKELHKEFGPSHFSV 103 + + Y F+V A G+ L ++KG L+ NVAS T Y L+ ++ F+V Sbjct: 22242 MTTVYDFQVNAADGKPYDLSQHKGHPLLIYNVASRCGYTKGGYETAATLYNKYKGQGFTV 22421 Query: 104 LAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVD-----SS 158 LAFPCNQF EP + EV+ +A + FPI KI + G + P + F+ Sbjct: 22422 LAFPCNQFAGQEPGTAVEVKEYACTRFKADFPIMEKIDVNGDKAHPLYEFMKSLKPGILG 22601 Query: 159 KKEPRWNFWKYLVNPEGQVVKFWKPEEPIEVIRPDIAALVRQ 200 K +WNF +L++ G V+ + P +E I + ++ + Sbjct: 22602 TKAIKWNFTSFLIDRHGVPVERFSPGASVEEIEKKLLPILNE 22727 Score = 86.3 bits (212), Expect = 3e-17 Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 5/164 (3%) Frame = +3 Query: 45 NSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASD*QLTDRNYLGLKELHKEFGPSHFSVL 104 +S Y F++ DA + L ++KG L+ NVAS T Y L+ ++ F+VL Sbjct: 24468 SSIYDFQILDADHQLYDLSQHKGHPLLIYNVASRCGYTKGGYETATTLYNKYKGQGFTVL 24647 Query: 105 AFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLV-----DSSK 159 AFPCNQF EP + EV+ FA + FPI KI + G + P + +L + Sbjct: 24648 AFPCNQFAGQEPGTALEVKEFACTQFKADFPIMAKIDVNGDKAHPLYSYLKRCLTGSAGV 24827 Query: 160 KEPRWNFWKYLVNPEGQVVKFWKPEEPIEVIRPDIAALVRQVII 203 + +WNF +L++ G V + P +E I + L ++ Sbjct: 24828 QAIKWNFTSFLIDRHGVPVARFSPGASVEEIEMQLLPLFEGEVV 24959 >gi|70878965|gb|AAHK01000457.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053511019, whole genome shotgun sequence Length = 34760 Score = 88.6 bits (218), Expect = 7e-18 Identities = 43/119 (36%), Positives = 73/119 (61%) Frame = -2 Query: 57 GRTVSLEKYKGKVSLVVNVASD*QLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEP 116 G++V+L Y G+V++VVN AS + + L + + +GP F++LAFPC QF EP Sbjct: 29353 GKSVALSNYTGRVTVVVNTASLCSFANSSLQQLTHVQETYGPRGFTILAFPCAQFANQEP 29174 Query: 117 RPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEG 175 + ++E+ +A + G+ FP+F K+K+ G + P F+ L +S RWN+ K++ + EG Sbjct: 29173 KSNEEIAVWA-QTCGLNFPLFDKVKVKGPDAHPLFQML-QASLGPIRWNYTKFICDREG 29003 >gi|70871017|gb|AAHK01001472.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053511543, whole genome shotgun sequence Length = 12177 Score = 87.0 bits (214), Expect = 2e-17 Identities = 43/119 (36%), Positives = 72/119 (60%) Frame = +1 Query: 57 GRTVSLEKYKGKVSLVVNVASD*QLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEP 116 G++V+L Y G+V++VVN AS + + L + + +GP ++LAFPC QF EP Sbjct: 11455 GKSVALSNYTGRVTVVVNTASLCSFANSSLQQLTHVQETYGPRGVTILAFPCAQFANQEP 11634 Query: 117 RPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEG 175 + ++E+ +A + GV FP+F K+K+ G + P F+ L +S RWN+ K++ + EG Sbjct: 11635 KSNEEITVWA-QTCGVNFPLFDKVKVKGPDAHPLFQML-QASLGPIRWNYTKFICDREG 11805 >gi|70879395|gb|AAHK01000424.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053507515, whole genome shotgun sequence Length = 36342 Score = 86.3 bits (212), Expect = 3e-17 Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 5/164 (3%) Frame = +1 Query: 45 NSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASD*QLTDRNYLGLKELHKEFGPSHFSVL 104 +S Y F++ DA + L ++KG L+ NVAS T Y L+ ++ F+VL Sbjct: 964 SSIYDFQILDADHQLYDLSQHKGHPLLIYNVASRCGYTKGGYETATTLYNKYKGQGFTVL 1143 Query: 105 AFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLV-----DSSK 159 AFPCNQF EP + EV+ FA + FPI KI + G + P + +L + Sbjct: 1144 AFPCNQFAGQEPGTALEVKEFACTQFKADFPIMAKIDVNGDKAHPLYSYLKRCLTGSAGV 1323 Query: 160 KEPRWNFWKYLVNPEGQVVKFWKPEEPIEVIRPDIAALVRQVII 203 + +WNF +L++ G V + P +E I + L ++ Sbjct: 1324 QAIKWNFTSFLIDRHGVPVARFSPGASVEEIEMQLLPLFEGEVV 1455 Score = 67.8 bits (164), Expect = 1e-11 Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 5/103 (4%) Frame = +1 Query: 101 FSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDS--- 157 F+VLAFPCNQF EP + EV+ FA + FPI KI + GS+ P + F+ + Sbjct: 19 FTVLAFPCNQFAGQEPGTALEVKEFACTRFKADFPIMAKIDVNGSKAHPLYEFMKATIPG 198 Query: 158 --SKKEPRWNFWKYLVNPEGQVVKFWKPEEPIEVIRPDIAALV 198 K +WNF +L++ G V+ + P +E I + L+ Sbjct: 199 LFGTKAIKWNFTSFLIDRHGVPVERFSPGASVEDIEKKLLPLL 327 >gi|70838800|gb|AAHK01029133.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053442389, whole genome shotgun sequence Length = 689 Score = 64.3 bits (155), Expect = 1e-10 Identities = 44/139 (31%), Positives = 61/139 (43%), Gaps = 10/139 (7%) Frame = +2 Query: 8 PLKCSGPRAKVFAVLL----------SIVLCTVTLFLLQLKFLKPKINSFYAFEVKDAKG 57 P C P + +F L S V C +F ++ S Y F+V A G Sbjct: 260 PAFCLNPLSFLFLFFLIFISLLPPPRSSVTCGE*MFRFGQLLRAAEMKSIYEFQVNAADG 439 Query: 58 RTVSLEKYKGKVSLVVNVASD*QLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPR 117 + L ++KG L+ NVAS T Y L+ ++ F+VLAFPCNQF EP Sbjct: 440 KPYDLSQHKGHPLLIYNVASRCGYTKGGYETATTLYNKYKGQGFTVLAFPCNQFAGQEPG 619 Query: 118 PSKEVESFARKNYGVTFPI 136 + EV+ FA + F I Sbjct: 620 TALEVKEFACTRFKADFHI 676 Database: bd_tcruzi Posted date: Mar 4, 2010 2:29 PM Number of letters in database: 89,612,356 Number of sequences in database: 32,746 Lambda K H 0.324 0.141 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,141,255 Number of Sequences: 32746 Number of extensions: 318482 Number of successful extensions: 1250 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1189 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1248 length of query: 209 length of database: 29,870,785 effective HSP length: 102 effective length of query: 107 effective length of database: 26,530,693 effective search space: 2838784151 effective search space used: 2838784151 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 61 (28.1 bits)