TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000007_1.0 # Protein # Glutathione peroxidase 4 (GPx4) # Homo sapiens # Complete (197 letters) Database: bd_tcruzi 32,746 sequences; 89,612,356 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|70877619|gb|AAHK01000570.1| Trypanosoma cruzi strain CL Brene... 122 5e-28 gi|70879395|gb|AAHK01000424.1| Trypanosoma cruzi strain CL Brene... 117 2e-26 gi|70871017|gb|AAHK01001472.1| Trypanosoma cruzi strain CL Brene... 92 7e-19 gi|70878965|gb|AAHK01000457.1| Trypanosoma cruzi strain CL Brene... 90 2e-18 gi|70838800|gb|AAHK01029133.1| Trypanosoma cruzi strain CL Brene... 71 1e-12 gi|70864594|gb|AAHK01003905.1| Trypanosoma cruzi strain CL Brene... 30 2.6 gi|70884413|gb|AAHK01000106.1| Trypanosoma cruzi strain CL Brene... 29 4.4 gi|70849138|gb|AAHK01018801.1| Trypanosoma cruzi strain CL Brene... 28 9.8 gi|70884193|gb|AAHK01000116.1| Trypanosoma cruzi strain CL Brene... 28 9.8 >gi|70877619|gb|AAHK01000570.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053503899, whole genome shotgun sequence Length = 29983 Score = 122 bits (305), Expect = 5e-28 Identities = 68/157 (43%), Positives = 97/157 (61%), Gaps = 3/157 (1%) Frame = +3 Query: 40 SMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQ*GKTEVNYTQLVDLHARYAECGLRILA 99 ++++F DG +L +++G ++ NVAS+ G T+ Y L+ +Y G +LA Sbjct: 22248 TVYDFQVNAADGKPYDLSQHKGHPLLIYNVASRCGYTKGGYETAATLYNKYKGQGFTVLA 22427 Query: 100 FPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMK-IQPKGKGIL 157 FPCNQF QEPG+ E+KE+A + F + KI VNGD AHPL+++MK ++P GIL Sbjct: 22428 FPCNQFAGQEPGTAVEVKEYACTRFKADFPIMEKIDVNGDKAHPLYEFMKSLKP---GIL 22598 Query: 158 G-NAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 193 G AIKWNFT FLID++G V+R+ P IEK L Sbjct: 22599 GTKAIKWNFTSFLIDRHGVPVERFSPGASVEEIEKKL 22709 Score = 118 bits (295), Expect = 7e-27 Identities = 66/157 (42%), Positives = 93/157 (59%), Gaps = 2/157 (1%) Frame = +2 Query: 39 RSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQ*GKTEVNYTQLVDLHARYAECGLRIL 98 +S++EF DG +L +++G ++ NVAS+ G T+ Y L+ +Y G +L Sbjct: 23342 KSIYEFQVNAADGKPYDLSQHKGHPLLIYNVASRCGYTKGGYETATTLYNKYKGQGFTVL 23521 Query: 99 AFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGIL 157 AFPCNQF QEPG+ E+KE+A + F + KI VNG AHPL+++MK G+ Sbjct: 23522 AFPCNQFAGQEPGTALEVKEYACTRFKADFPIMEKIDVNGGKAHPLYEFMKATI--PGLF 23695 Query: 158 G-NAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 193 G AIKWNFT FLID++G V+R+ P IEK L Sbjct: 23696 GTKAIKWNFTSFLIDRHGVPVERFSPGASVEDIEKKL 23806 Score = 117 bits (292), Expect = 2e-26 Identities = 64/155 (41%), Positives = 91/155 (58%), Gaps = 1/155 (0%) Frame = +3 Query: 40 SMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQ*GKTEVNYTQLVDLHARYAECGLRILA 99 S+++F D D + +L +++G ++ NVAS+ G T+ Y L+ +Y G +LA Sbjct: 24471 SIYDFQILDADHQLYDLSQHKGHPLLIYNVASRCGYTKGGYETATTLYNKYKGQGFTVLA 24650 Query: 100 FPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILG 158 FPCNQF QEPG+ E+KEFA + F + +KI VNGD AHPL+ ++K G + Sbjct: 24651 FPCNQFAGQEPGTALEVKEFACTQFKADFPIMAKIDVNGDKAHPLYSYLKRCLTGSAGV- 24827 Query: 159 NAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 193 AIKWNFT FLID++G V R+ P IE L Sbjct: 24828 QAIKWNFTSFLIDRHGVPVARFSPGASVEEIEMQL 24932 >gi|70879395|gb|AAHK01000424.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053507515, whole genome shotgun sequence Length = 36342 Score = 117 bits (292), Expect = 2e-26 Identities = 64/155 (41%), Positives = 91/155 (58%), Gaps = 1/155 (0%) Frame = +1 Query: 40 SMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQ*GKTEVNYTQLVDLHARYAECGLRILA 99 S+++F D D + +L +++G ++ NVAS+ G T+ Y L+ +Y G +LA Sbjct: 967 SIYDFQILDADHQLYDLSQHKGHPLLIYNVASRCGYTKGGYETATTLYNKYKGQGFTVLA 1146 Query: 100 FPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILG 158 FPCNQF QEPG+ E+KEFA + F + +KI VNGD AHPL+ ++K G + Sbjct: 1147 FPCNQFAGQEPGTALEVKEFACTQFKADFPIMAKIDVNGDKAHPLYSYLKRCLTGSAGV- 1323 Query: 159 NAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 193 AIKWNFT FLID++G V R+ P IE L Sbjct: 1324 QAIKWNFTSFLIDRHGVPVARFSPGASVEEIEMQL 1428 Score = 90.5 bits (223), Expect = 2e-18 Identities = 50/99 (50%), Positives = 64/99 (64%), Gaps = 2/99 (2%) Frame = +1 Query: 97 ILAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKG 155 +LAFPCNQF QEPG+ E+KEFA + F + +KI VNG AHPL+++MK G Sbjct: 25 VLAFPCNQFAGQEPGTALEVKEFACTRFKADFPIMAKIDVNGSKAHPLYEFMKATI--PG 198 Query: 156 ILG-NAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 193 + G AIKWNFT FLID++G V+R+ P IEK L Sbjct: 199 LFGTKAIKWNFTSFLIDRHGVPVERFSPGASVEDIEKKL 315 >gi|70871017|gb|AAHK01001472.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053511543, whole genome shotgun sequence Length = 12177 Score = 91.7 bits (226), Expect = 7e-19 Identities = 52/124 (41%), Positives = 67/124 (54%) Frame = +1 Query: 51 GHMVNLDKYRGFVCIVTNVASQ*GKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEP 110 G V L Y G V +V N AS + QL + Y G+ ILAFPC QF QEP Sbjct: 11455 GKSVALSNYTGRVTVVVNTASLCSFANSSLQQLTHVQETYGPRGVTILAFPCAQFANQEP 11634 Query: 111 GSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLI 170 SNEEI +A V F +F K+ V G DAHPL++ ++ LG I+WN+TKF+ Sbjct: 11635 KSNEEITVWAQTCGVNFPLFDKVKVKGPDAHPLFQMLQAS------LG-PIRWNYTKFIC 11793 Query: 171 DKNG 174 D+ G Sbjct: 11794 DREG 11805 >gi|70878965|gb|AAHK01000457.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053511019, whole genome shotgun sequence Length = 34760 Score = 90.1 bits (222), Expect = 2e-18 Identities = 51/124 (41%), Positives = 66/124 (53%) Frame = -2 Query: 51 GHMVNLDKYRGFVCIVTNVASQ*GKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEP 110 G V L Y G V +V N AS + QL + Y G ILAFPC QF QEP Sbjct: 29353 GKSVALSNYTGRVTVVVNTASLCSFANSSLQQLTHVQETYGPRGFTILAFPCAQFANQEP 29174 Query: 111 GSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLI 170 SNEEI +A + F +F K+ V G DAHPL++ ++ LG I+WN+TKF+ Sbjct: 29173 KSNEEIAVWAQTCGLNFPLFDKVKVKGPDAHPLFQMLQAS------LG-PIRWNYTKFIC 29015 Query: 171 DKNG 174 D+ G Sbjct: 29014 DREG 29003 >gi|70838800|gb|AAHK01029133.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053442389, whole genome shotgun sequence Length = 689 Score = 70.9 bits (172), Expect = 1e-12 Identities = 34/82 (41%), Positives = 50/82 (60%) Frame = +2 Query: 39 RSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQ*GKTEVNYTQLVDLHARYAECGLRIL 98 +S++EF DG +L +++G ++ NVAS+ G T+ Y L+ +Y G +L Sbjct: 401 KSIYEFQVNAADGKPYDLSQHKGHPLLIYNVASRCGYTKGGYETATTLYNKYKGQGFTVL 580 Query: 99 AFPCNQFGKQEPGSNEEIKEFA 120 AFPCNQF QEPG+ E+KEFA Sbjct: 581 AFPCNQFAGQEPGTALEVKEFA 646 >gi|70864594|gb|AAHK01003905.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053505109, whole genome shotgun sequence Length = 2376 Score = 30.0 bits (66), Expect = 2.6 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +3 Query: 172 KNGCVVKRYGPMEEPLVIEKDLPHYF 197 K GCVV R GP ++ PHY+ Sbjct: 1479 KKGCVVFRQGPSSSSRTVQSTYPHYY 1556 >gi|70884413|gb|AAHK01000106.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053509753, whole genome shotgun sequence Length = 66380 Score = 29.3 bits (64), Expect = 4.4 Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 10/52 (19%) Frame = -1 Query: 6 LCRLL---KPAL----LCGALAAPGLAGTMCASR---DDWRCARSMHEFSAK 47 LCRLL + AL C L A G++ CAS W C RS+HE SAK Sbjct: 27638 LCRLLQRKRSALNMSEYCYMLCALGVSTRCCASERYSSGW-CRRSIHEMSAK 27486 >gi|70849138|gb|AAHK01018801.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053461117, whole genome shotgun sequence Length = 932 Score = 28.1 bits (61), Expect = 9.8 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = +1 Query: 19 LAAPGLAGTMCASRDDWRCARSMHEFSAKDIDG-HMVNLDKYR 60 LA L GT C W+C+R AKD+ G H+ N + R Sbjct: 289 LAVKELGGTSCGKNGVWKCSRC---GKAKDLSGEHLKNKTEVR 408 >gi|70884193|gb|AAHK01000116.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053508831, whole genome shotgun sequence Length = 64221 Score = 28.1 bits (61), Expect = 9.8 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = -2 Query: 19 LAAPGLAGTMCASRDDWRCARSMHEFSAKDIDG-HMVNLDKYR 60 LA L GT C W+C+R AKD+ G H+ N + R Sbjct: 34040 LAVKELGGTSCGKNGVWKCSRC---GKAKDLSGEHLKNKTEVR 33921 Score = 28.1 bits (61), Expect = 9.8 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = -2 Query: 19 LAAPGLAGTMCASRDDWRCARSMHEFSAKDIDG-HMVNLDKYR 60 LA L GT C W+C+R AKD+ G H+ N + R Sbjct: 32183 LAVKELGGTSCGKNGVWKCSRC---GKAKDLSGEHLKNKTEVR 32064 Database: bd_tcruzi Posted date: Mar 2, 2010 6:38 PM Number of letters in database: 89,612,356 Number of sequences in database: 32,746 Lambda K H 0.326 0.142 0.467 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,557,097 Number of Sequences: 32746 Number of extensions: 492309 Number of successful extensions: 3626 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3206 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3614 length of query: 197 length of database: 29,870,785 effective HSP length: 101 effective length of query: 96 effective length of database: 26,563,439 effective search space: 2550090144 effective search space used: 2550090144 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 61 (28.1 bits)