TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000005_1.0 # Protein # Glutathione peroxidase 2 (GPx2) # Homo sapiens # Complete (190 letters) Database: bd_tcruzi 32,746 sequences; 89,612,356 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|70877619|gb|AAHK01000570.1| Trypanosoma cruzi strain CL Brene... 70 2e-12 gi|70879395|gb|AAHK01000424.1| Trypanosoma cruzi strain CL Brene... 64 2e-10 gi|70871017|gb|AAHK01001472.1| Trypanosoma cruzi strain CL Brene... 60 2e-09 gi|70878965|gb|AAHK01000457.1| Trypanosoma cruzi strain CL Brene... 60 3e-09 gi|70838800|gb|AAHK01029133.1| Trypanosoma cruzi strain CL Brene... 46 4e-05 >gi|70877619|gb|AAHK01000570.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053503899, whole genome shotgun sequence Length = 29983 Score = 70.5 bits (171), Expect = 2e-12 Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 1/182 (0%) Frame = +2 Query: 6 KSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRFPRR-LVVL 64 KS Y+ + DG+ D + +G +LI NVAS G T + L ++ + VL Sbjct: 23342 KSIYEFQVNAADGKPYDLSQHKGHPLLIYNVASRCGYTKGGYETATTLYNKYKGQGFTVL 23521 Query: 65 GFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDKLP 124 FPCNQF QE E+ R ++ F +++K +VNG HP++ ++K +P Sbjct: 23522 AFPCNQFAGQEPGTALEV-KEYACTR----FKADFPIMEKIDVNGGKAHPLYEFMKATIP 23686 Query: 125 YPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKR 184 + + WNF FLI G P R+S P ++E K+ Sbjct: 23687 GLFGT------------------KAIKWNFTSFLIDRHGVPVERFS---PGASVEDIEKK 23803 Query: 185 LL 186 LL Sbjct: 23804 LL 23809 Score = 68.6 bits (166), Expect = 6e-12 Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 1/181 (0%) Frame = +3 Query: 9 YDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRFPRR-LVVLGFP 67 YD + DG+ D + +G +LI NVAS G T + L ++ + VL FP Sbjct: 22254 YDFQVNAADGKPYDLSQHKGHPLLIYNVASRCGYTKGGYETAATLYNKYKGQGFTVLAFP 22433 Query: 68 CNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDKLPYPY 127 CNQF QE E+ R ++ F +++K +VNG HP++ ++K P Sbjct: 22434 CNQFAGQEPGTAVEV-KEYACTR----FKADFPIMEKIDVNGDKAHPLYEFMKSLKP--- 22589 Query: 128 DDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKRLLK 187 + + WNF FLI G P R+S P ++E K+LL Sbjct: 22590 ---------------GILGTKAIKWNFTSFLIDRHGVPVERFS---PGASVEEIEKKLLP 22715 Query: 188 V 188 + Sbjct: 22716 I 22718 Score = 63.5 bits (153), Expect = 2e-10 Identities = 47/165 (28%), Positives = 67/165 (40%), Gaps = 1/165 (0%) Frame = +3 Query: 7 SFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRFPRR-LVVLG 65 S YD + D + D + +G +LI NVAS G T + L ++ + VL Sbjct: 24471 SIYDFQILDADHQLYDLSQHKGHPLLIYNVASRCGYTKGGYETATTLYNKYKGQGFTVLA 24650 Query: 66 FPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDKLPY 125 FPCNQF QE E+ ++ F ++ K +VNG HP+++YLK L Sbjct: 24651 FPCNQFAGQEPGTALEVKEFACTQ-----FKADFPIMAKIDVNGDKAHPLYSYLKRCLT- 24812 Query: 126 PYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYS 170 + WNF FLI G P R+S Sbjct: 24813 -----------------GSAGVQAIKWNFTSFLIDRHGVPVARFS 24896 >gi|70879395|gb|AAHK01000424.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053507515, whole genome shotgun sequence Length = 36342 Score = 63.5 bits (153), Expect = 2e-10 Identities = 47/165 (28%), Positives = 67/165 (40%), Gaps = 1/165 (0%) Frame = +1 Query: 7 SFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRFPRR-LVVLG 65 S YD + D + D + +G +LI NVAS G T + L ++ + VL Sbjct: 967 SIYDFQILDADHQLYDLSQHKGHPLLIYNVASRCGYTKGGYETATTLYNKYKGQGFTVLA 1146 Query: 66 FPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDKLPY 125 FPCNQF QE E+ ++ F ++ K +VNG HP+++YLK L Sbjct: 1147 FPCNQFAGQEPGTALEVKEFACTQ-----FKADFPIMAKIDVNGDKAHPLYSYLKRCLT- 1308 Query: 126 PYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYS 170 + WNF FLI G P R+S Sbjct: 1309 -----------------GSAGVQAIKWNFTSFLIDRHGVPVARFS 1392 Score = 51.2 bits (121), Expect = 1e-06 Identities = 37/128 (28%), Positives = 54/128 (42%) Frame = +1 Query: 59 RRLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAY 118 R VL FPCNQF QE E+ R ++ F ++ K +VNG HP++ + Sbjct: 13 RVFTVLAFPCNQFAGQEPGTALEV-KEFACTR----FKADFPIMAKIDVNGSKAHPLYEF 177 Query: 119 LKDKLPYPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFPTINI 178 +K +P + + WNF FLI G P R+S P ++ Sbjct: 178 MKATIPGLFG------------------TKAIKWNFTSFLIDRHGVPVERFS---PGASV 294 Query: 179 EPDIKRLL 186 E K+LL Sbjct: 295 EDIEKKLL 318 >gi|70871017|gb|AAHK01001472.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053511543, whole genome shotgun sequence Length = 12177 Score = 60.5 bits (145), Expect = 2e-09 Identities = 45/151 (29%), Positives = 65/151 (43%), Gaps = 1/151 (0%) Frame = +1 Query: 16 LDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRLVVLGFPCNQFGHQ 74 + G+ V + + GR ++ N ASL QL +Q + PR + +L FPC QF +Q Sbjct: 11449 MGGKSVALSNYTGRVTVVVNTASLCSFANSSLQQLTHVQETYGPRGVTILAFPCAQFANQ 11628 Query: 75 ENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDKLPYPYDDPFSLM 134 E NEEI + + G F L K +V G + HP+F L+ L Sbjct: 11629 EPKSNEEI---TVWAQTCG---VNFPLFDKVKVKGPDAHPLFQMLQASL----------- 11757 Query: 135 TDPKLIIWSPVRRSDVAWNFEKFLIGPEGEP 165 P+R WN+ KF+ EG P Sbjct: 11758 --------GPIR-----WNYTKFICDREGIP 11811 >gi|70878965|gb|AAHK01000457.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053511019, whole genome shotgun sequence Length = 34760 Score = 59.7 bits (143), Expect = 3e-09 Identities = 45/151 (29%), Positives = 64/151 (42%), Gaps = 1/151 (0%) Frame = -2 Query: 16 LDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRF-PRRLVVLGFPCNQFGHQ 74 + G+ V + + GR ++ N ASL QL +Q + PR +L FPC QF +Q Sbjct: 29359 MGGKSVALSNYTGRVTVVVNTASLCSFANSSLQQLTHVQETYGPRGFTILAFPCAQFANQ 29180 Query: 75 ENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDKLPYPYDDPFSLM 134 E NEEI + + G F L K +V G + HP+F L+ L Sbjct: 29179 EPKSNEEI---AVWAQTCG---LNFPLFDKVKVKGPDAHPLFQMLQASL----------- 29051 Query: 135 TDPKLIIWSPVRRSDVAWNFEKFLIGPEGEP 165 P+R WN+ KF+ EG P Sbjct: 29050 --------GPIR-----WNYTKFICDREGIP 28997 >gi|70838800|gb|AAHK01029133.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053442389, whole genome shotgun sequence Length = 689 Score = 45.8 bits (107), Expect = 4e-05 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Frame = +2 Query: 6 KSFYDLSAISLDGEKVDFNTFRGRAVLIENVASL*GTTTRDFTQLNELQCRFP-RRLVVL 64 KS Y+ + DG+ D + +G +LI NVAS G T + L ++ + VL Sbjct: 401 KSIYEFQVNAADGKPYDLSQHKGHPLLIYNVASRCGYTKGGYETATTLYNKYKGQGFTVL 580 Query: 65 GFPCNQFGHQE 75 FPCNQF QE Sbjct: 581 AFPCNQFAGQE 613 Database: bd_tcruzi Posted date: Mar 1, 2010 4:51 PM Number of letters in database: 89,612,356 Number of sequences in database: 32,746 Lambda K H 0.326 0.143 0.450 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,685,766 Number of Sequences: 32746 Number of extensions: 347928 Number of successful extensions: 1471 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1379 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1457 length of query: 190 length of database: 29,870,785 effective HSP length: 100 effective length of query: 90 effective length of database: 26,596,185 effective search space: 2393656650 effective search space used: 2393656650 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 61 (28.1 bits)