T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:1 sec.
SCORE=89
*
BAD AVG GOOD
*
SPP00000004_1.0 : 90
SPP00000005_1.0 : 91
SPP00000006_1.0 : 88
SPP00000007_1.0 : 85
SPP00000008_1.0 : 88
SPP00000009_1.0 : 88
SPP00000011_1.0 : 86
GPX_A_GPX6_HIT2 : 88
GPX_B_GPX8_HIT2 : 92
GPX_C_GPX8_HIT1 : 92
GPX_D_GPX7_HIT4 : 85
GPX_E_GPX7_HIT3 : 90
cons : 89
SPP00000004_1.0 MCAA------------------------------------R----
SPP00000005_1.0 MA-------------------------------------------
SPP00000006_1.0 MARLLQ------------ASCLLSLLLAGFVSQSRGQEKSK----
SPP00000007_1.0 MSLGRL------------CRLLKPAL-LCGALAAPG--LAGTMCA
SPP00000008_1.0 MTTQLR------------VVHLLPLLLACFVQTSPKQEKMK----
SPP00000009_1.0 MFQQFQ------------ASCLVLFFLVGFAQQTLKPQNRK----
SPP00000011_1.0 MEPLAAYPLKCSGPRAKVFAVLLSIV-LCTVTL--F--LLQ----
GPX_A_GPX6_HIT2 SPD-----------------------------------RAR----
GPX_B_GPX8_HIT2 ---------------------------------------------
GPX_C_GPX8_HIT1 ---------------------------------------------
GPX_D_GPX7_HIT4 ---------------------------------------------
GPX_E_GPX7_HIT3 Q--------------------------------------------
cons
SPP00000004_1.0 LAAAAAAAQSVYAFSARPLAGGEPVSLGSLRG-KVLLIENVASLX
SPP00000005_1.0 -----FIAKSFYDLSAISLDGE-KVDFNTFRG-RAVLIENVASLX
SPP00000006_1.0 MDCHGGISGTIYEYGALTIDGEEYIPFKQYAG-KYVLFVNVASYX
SPP00000007_1.0 SRDDWRCARSMHEFSAKDIDGH-MVNLDKYRG-FVCIVTNVASQU
SPP00000008_1.0 MDCHKDEKGTIYDYEAIALNKNEYVSFKQYVG-KHILFVNVATYX
SPP00000009_1.0 VDCNKGVTGTIYEYGALTLNGEEYIQFKQFAG-KHVLFVNVAAYU
SPP00000011_1.0 LKFLKPKINSFYAFEVKDAKGR-TVSLEKYKG-KVSLVVNVASD-
GPX_A_GPX6_HIT2 ASSAAGRRKSAHNFSFRSLTGSKFIRLADFAG-KPILVVNVASHC
GPX_B_GPX8_HIT2 ------KIKSFYELKDFDMAGN-EVSMAKYKG-KVVLAVNVSSKC
GPX_C_GPX8_HIT1 ------KIKSFYELKDFDMAGN-EVSMAKYKG-KVVLAVNVSSKC
GPX_D_GPX7_HIT4 ---------NFLTFTTIQPADGR-LTPADFRF-KAALVVNTASK-
GPX_E_GPX7_HIT3 ------TPTSFLDFSVPDLRGH-QVSMREFSAFRVILVVNVASDC
cons . : : *.::
SPP00000004_1.0 GTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILN
SPP00000005_1.0 GTTTRDFTQLNELQCRFP-RRLVVLGFPCNQFGHQENCQNEEILN
SPP00000006_1.0 GLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILP
SPP00000007_1.0 GKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKE
SPP00000008_1.0 GLT-AQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILP
SPP00000009_1.0 GLA-AQYPELNALQEELKNFGVIVLAFPCNQFGKQEPGTNSEILL
SPP00000011_1.0 QLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVES
GPX_A_GPX6_HIT2 NSTTKAYVQLNDLAKRFPE--LVIIGCPCNQFGHQENLNGEEIYQ
GPX_B_GPX8_HIT2 GLTPTNYPELQELYAKYKDEGLEVLAFPCNQFAGQEPGTHEEIME
GPX_C_GPX8_HIT1 GLTPTNYPELQELYAKYKDEGLEVLAFPCNQFAGQEPGTHEEIME
GPX_D_GPX7_HIT4 CSHSAQLKQLQQLHEKYSDLGLVVVAVPSNDFAGQEPGDNSEILE
GPX_E_GPX7_HIT3 GYTDKNYRELQELYEKYHDEGFMVLGFPCNQFGGQEPGTAEGILK
cons : * . . ::. *.*:*. .* . :
SPP00000004_1.0 SLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDD
SPP00000005_1.0 SLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDKLPYPYDD
SPP00000006_1.0 TLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSE-
SPP00000007_1.0 FA------AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGK-G-
SPP00000008_1.0 GLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSE-
SPP00000009_1.0 GLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTSD-
SPP00000011_1.0 FAR-----KNYGVTFPIFHKIKILGSEGEPAFRFLVDSSK-----
GPX_A_GPX6_HIT2 SLRHIRPGKGFEPAFMLTEKVEVNGANAHALFNFLRITLPYPC--
GPX_B_GPX8_HIT2 FV------KQYNVTFPFFEKHDVNGATARPVFTYLKTKLPGS---
GPX_C_GPX8_HIT1 FV------KQYNVTFPFFEKHDVNGATARPVFTYLKTKLPGS---
GPX_D_GPX7_HIT4 RY------AAFGATFAIAEKTPVTGDKAHPFFKKIADKYSASV--
GPX_E_GPX7_HIT3 FTQ-----EKYHVTFPLFTKVDVNGDNAHPLFKFLK---------
cons : * : * : * . : :
SPP00000004_1.0 ATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQ
SPP00000005_1.0 PFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFP
SPP00000006_1.0 ---LLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTT
SPP00000007_1.0 ---I------------LGNAIKWNFTKFLIDKNGCVVKRYGPMEE
SPP00000008_1.0 ---ILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRAT
SPP00000009_1.0 ---LLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAP
SPP00000011_1.0 ------------------KEPRWNFWKYLVNPEGQVVKFWKPEEP
GPX_A_GPX6_HIT2 ---------------------------------------------
GPX_B_GPX8_HIT2 ----------------FGDFVKWNFTKFLVDRNGQPYKRFAPKDR
GPX_C_GPX8_HIT1 ----------------FGDFVKWNFTKFLVDRNGQPYKRFAPKDR
GPX_D_GPX7_HIT4 -------------------APTWNFDKFL----------------
GPX_E_GPX7_HIT3 ---------------------------------------------
cons
SPP00000004_1.0 TIDIEPDIEALLSQG----PSCA
SPP00000005_1.0 TINIEPDIKRLLKV-------AI
SPP00000006_1.0 VSNVKMDILSYMRRQAALGVKRK
SPP00000007_1.0 PLVIEKDLPHY-----------F
SPP00000008_1.0 VSSVKTDILAYLKQ-----FKTK
SPP00000009_1.0 VSTVKSDILEYLKQ-----FNTH
SPP00000011_1.0 IEVIRPDIAALVRQVIIKKKEDL
GPX_A_GPX6_HIT2 ----------------------D
GPX_B_GPX8_HIT2 PLSFEEDIKTLL---------AQ
GPX_C_GPX8_HIT1 PLSFEEDIKTLL---------AQ
GPX_D_GPX7_HIT4 ----------------------V
GPX_E_GPX7_HIT3 ----------------------Q
cons