TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000011_1.0 # Protein # Glutathione peroxidase 8 (GPx8) # Homo sapiens # Complete (209 letters) Database: bd_sojae 5578 sequences; 78,051,097 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|113926248|gb|AAQY01000500.1| Phytophthora sojae strain P6497 ... 111 7e-25 gi|113926249|gb|AAQY01000499.1| Phytophthora sojae strain P6497 ... 111 7e-25 gi|113926199|gb|AAQY01000549.1| Phytophthora sojae strain P6497 ... 96 5e-20 gi|113926650|gb|AAQY01000098.1| Phytophthora sojae strain P6497 ... 52 9e-07 gi|113925585|gb|AAQY01001163.1| Phytophthora sojae strain P6497 ... 29 6.2 gi|113926611|gb|AAQY01000137.1| Phytophthora sojae strain P6497 ... 28 8.1 >gi|113926248|gb|AAQY01000500.1| Phytophthora sojae strain P6497 Psojae_Cont500, whole genome shotgun sequence Length = 93234 Score = 111 bits (278), Expect = 7e-25 Identities = 67/162 (41%), Positives = 86/162 (53%), Gaps = 4/162 (2%) Frame = +3 Query: 43 KINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASD*QLTDRNYLGLKELHKEFGPSHFS 102 KI SFY + D G VS+ KYKGKV L VNV+S LT NY L+EL+ ++ Sbjct: 6753 KIKSFYELKDFDMAGNEVSMAKYKGKVVLAVNVSSKCGLTPTNYPELQELYAKYKDEGLE 6932 Query: 103 VLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRF----LVDSS 158 VLAFPCNQF EP +E+ F K Y VTFP F K + G+ P F + L S Sbjct: 6933 VLAFPCNQFAGQEPGTHEEIMEFV-KQYNVTFPFFEKHDVNGATARPVFTYLKTKLPGSF 7109 Query: 159 KKEPRWNFWKYLVNPEGQVVKFWKPEEPIEVIRPDIAALVRQ 200 +WNF K+LV+ GQ K + P++ DI L+ Q Sbjct: 7110 GDFVKWNFTKFLVDRNGQPYKRFAPKDRPLSFEEDIKTLLAQ 7235 >gi|113926249|gb|AAQY01000499.1| Phytophthora sojae strain P6497 Psojae_Cont499, whole genome shotgun sequence Length = 73962 Score = 111 bits (278), Expect = 7e-25 Identities = 67/162 (41%), Positives = 86/162 (53%), Gaps = 4/162 (2%) Frame = +3 Query: 43 KINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASD*QLTDRNYLGLKELHKEFGPSHFS 102 KI SFY + D G VS+ KYKGKV L VNV+S LT NY L+EL+ ++ Sbjct: 71541 KIKSFYELKDFDMAGNEVSMAKYKGKVVLAVNVSSKCGLTPTNYPELQELYAKYKDEGLE 71720 Query: 103 VLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRF----LVDSS 158 VLAFPCNQF EP +E+ F K Y VTFP F K + G+ P F + L S Sbjct: 71721 VLAFPCNQFAGQEPGTHEEIMEFV-KQYNVTFPFFEKHDVNGATARPVFTYLKTKLPGSF 71897 Query: 159 KKEPRWNFWKYLVNPEGQVVKFWKPEEPIEVIRPDIAALVRQ 200 +WNF K+LV+ GQ K + P++ DI L+ Q Sbjct: 71898 GDFVKWNFTKFLVDRNGQPYKRFAPKDRPLSFEEDIKTLLAQ 72023 Score = 102 bits (255), Expect = 3e-22 Identities = 63/160 (39%), Positives = 86/160 (53%), Gaps = 7/160 (4%) Frame = -1 Query: 46 SFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASD*QLTDRNYLGLKELHKEFGPSHFSVLA 105 SFY + D + VS+E+YKGKV LVVNV+S LT NY L++L++++ VL Sbjct: 57297 SFYELKDFDMDKKEVSMEEYKGKVVLVVNVSSKCGLTPTNYPELQQLYEKYQEEGLVVLG 57118 Query: 106 FPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEP--- 162 FPCNQF EP +E+ F K Y V+FP+F K + GS P F +L K P Sbjct: 57117 FPCNQFKSQEPGTHEEIIEFV-KQYNVSFPLFEKHDVNGSNARPIFTYL---KAKLPGTF 56950 Query: 163 ----RWNFWKYLVNPEGQVVKFWKPEEPIEVIRPDIAALV 198 +WNF K+LV+ GQ K + P + DI L+ Sbjct: 56949 GNYIKWNFTKFLVDRNGQPFKRYAPTDLPLSFEEDIKELL 56830 Score = 63.9 bits (154), Expect = 2e-10 Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 9/166 (5%) Frame = +1 Query: 46 SFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASD*QLTD-RNYLGLKELHKEFGPSHFSVL 104 S Y+ DA G+ L + +G V+L+VNV S T+ L L +L K++ + V+ Sbjct: 39544 SLYSLRDTDANGKPFCLSELRGHVALLVNVTSGSCNTNAEQLLELADLSKKYEDAGLKVV 39723 Query: 105 AFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRW 164 AFP QFG++E +E+ ++ +GV FP+ + G A F R Sbjct: 39724 AFPSAQFGDAEFDNDEELVEHFQELFGVRFPVLTTRDVNGPNARDALLFCKTRVPGAARS 39903 Query: 165 --------NFWKYLVNPEGQVVKFWKPEEPIEVIRPDIAALVRQVI 202 NF K+LV+ EG++VK + P + + DI L+ V+ Sbjct: 39904 AANAFIENNFVKFLVDREGRLVKRFGPNDLPLSMETDIQELL*VVV 40041 >gi|113926199|gb|AAQY01000549.1| Phytophthora sojae strain P6497 Psojae_Cont549, whole genome shotgun sequence Length = 157963 Score = 95.5 bits (236), Expect = 5e-20 Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 43/224 (19%) Frame = -3 Query: 17 KVFAVLLSIVLCTVTLFLLQLKFLKPKIN--------SFYAFEVKDAKGRTVSLEKYKG- 67 K LL ++L T+TL L N SF F V D +G VS+ ++ Sbjct: 23993 KKMRTLLLLLLLTLTLAAFLLGGASASTNEQAEQTPTSFLDFSVPDLRGHQVSMREFSAF 23814 Query: 68 KVSLVVNVASD*QLTDRNY-----------LG-------------------LKELHKEFG 97 +V LVVNVASD TD+NY +G L+EL++++ Sbjct: 23813 RVILVVNVASDCGYTDKNYRELQVRRQRNAMGSCNVLYS*HNCLTFLLLQILQELYEKYH 23634 Query: 98 PSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDS 157 F VL FPCNQFG EP ++ + F ++ Y VTFP+F K+ + G P F+FL Sbjct: 23633 DEGFMVLGFPCNQFGGQEPGTAEGILKFTQEKYHVTFPLFTKVDVNGDNAHPLFKFLKQQ 23454 Query: 158 ----SKKEPRWNFWKYLVNPEGQVVKFWKPEEPIEVIRPDIAAL 197 + +WNF K+LV ++ P+E+ + AL Sbjct: 23453 LDGFITNDIKWNFTKFLVVNHEPFKRYGTTTSPLEMENDIVQAL 23322 >gi|113926650|gb|AAQY01000098.1| Phytophthora sojae strain P6497 Psojae_Cont98, whole genome shotgun sequence Length = 137971 Score = 51.6 bits (122), Expect = 9e-07 Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 6/115 (5%) Frame = +1 Query: 46 SFYAFEVKDAKG-RTVSLEKYKGKVSLVVNVASD*QLTDRNYLGLKELHKEFGPSHFSVL 104 S + F + G + + L + GK LVVNVAS T + Y+ L +L K F ++ Sbjct: 126118 SAHNFSFRSLTGSKFIRLADFAGKPILVVNVASHCNSTTKAYVQLNDLAKRF--PELVII 126291 Query: 105 AFPCNQFGESEPRPSKEVESFAR-----KNYGVTFPIFHKIKILGSEGEPAFRFL 154 PCNQFG E +E+ R K + F + K+++ G+ F FL Sbjct: 126292 GCPCNQFGHQENLNGEEIYQSLRHIRPGKGFEPAFMLTEKVEVNGANAHALFNFL 126456 >gi|113925585|gb|AAQY01001163.1| Phytophthora sojae strain P6497 Psojae_Cont1163, whole genome shotgun sequence Length = 90630 Score = 28.9 bits (63), Expect = 6.2 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = -1 Query: 152 RFLVDSSKKEPRWNFWKYLVNPEGQVVKFWKPEEPIEVIRP 192 RFL S + W FW+ LV +K WKP V RP Sbjct: 57039 RFLATSRRMSLIWPFWRPLVTL--ATLKCWKPSSMRSVHRP 56923 >gi|113926611|gb|AAQY01000137.1| Phytophthora sojae strain P6497 Psojae_Cont137, whole genome shotgun sequence Length = 277783 Score = 28.5 bits (62), Expect = 8.1 Identities = 14/46 (30%), Positives = 20/46 (43%) Frame = -3 Query: 104 LAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEP 149 +AFPC +F +P + S HK +LGS+G P Sbjct: 118679 MAFPCRRFARLFQKPRAHIRS-------------HKASLLGSQGRP 118581 Database: bd_sojae Posted date: Feb 23, 2010 5:58 PM Number of letters in database: 78,051,097 Number of sequences in database: 5578 Lambda K H 0.324 0.141 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,262,866 Number of Sequences: 5578 Number of extensions: 238726 Number of successful extensions: 1164 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 335 Number of HSP's successfully gapped in prelim test: 79 Number of HSP's that attempted gapping in prelim test: 718 Number of HSP's gapped (non-prelim): 637 length of query: 209 length of database: 26,017,032 effective HSP length: 101 effective length of query: 108 effective length of database: 25,453,654 effective search space: 2748994632 effective search space used: 2748994632 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 61 (28.1 bits)